Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 1.4e-151 539.7 286 100.0
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 2.4e-143 512.3 286 95.1
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 5.2e-138 494.6 284 93.3
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 5.2e-138 494.6 284 93.3
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 6.8e-138 494.2 284 90.8
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 2.3e-122 442.6 281 81.1
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 4.0e-122 441.8 286 82.5
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 6.6e-117 424.5 290 79.0
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 3.5e-110 402.1 283 74.2
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 2.5e-108 396.0 288 73.3
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 1.2e-105 387.1 285 73.3
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 4.4e-105 385.2 285 73.0
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 2.1e-102 376.3 285 70.2
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 3.7e-96 355.5 294 67.7
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 2.5e-84 316.2 287 59.2
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 2.2e-80 303.1 223 64.1
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 3.8e-80 302.4 266 56.0
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 3.5e-78 295.8 231 62.3
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 3.5e-78 295.8 222 64.0
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 4.6e-78 295.4 229 63.8
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 6.6e-77 291.6 280 57.1
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 6.6e-77 291.6 258 58.9
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 8.7e-77 291.2 234 59.4
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 2.5e-76 289.7 201 68.2
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 2.5e-76 289.7 205 65.9
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 3.3e-76 289.3 279 57.3
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 7.4e-76 288.1 268 57.1
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 7.4e-76 288.1 227 63.9
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 7.4e-76 288.1 280 56.4
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 2.8e-75 286.2 262 58.4
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 4.8e-75 285.4 297 52.5
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 8.1e-75 284.6 218 61.5
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 1.4e-74 283.9 209 63.2
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 1.8e-74 283.5 274 54.0
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 4.0e-74 282.3 218 60.6
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 5.3e-74 282.0 277 54.9
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 1.5e-73 280.4 266 55.6
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 2.0e-73 280.0 261 55.6
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 3.4e-73 279.3 218 60.1
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 5.8e-73 278.5 213 61.5
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 7.6e-73 278.1 263 56.3
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 7.6e-73 278.1 262 55.7
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.3e-72 277.3 258 58.1
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.7e-72 276.9 257 58.0
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 2.2e-72 276.6 267 52.8
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 3.8e-72 275.8 229 56.3
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 6.4e-72 275.0 263 56.3
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 1.1e-71 274.2 278 52.5
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 4.2e-71 272.3 263 54.0
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 9.3e-71 271.2 206 63.6
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 4.6e-70 268.9 202 65.8
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 6.0e-70 268.5 277 53.4
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 6.0e-70 268.5 250 57.6
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 6.0e-70 268.5 263 55.9
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 2.3e-69 266.5 222 58.1
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 5.1e-69 265.4 253 54.5
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 5.1e-69 265.4 266 53.0
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 5.1e-69 265.4 218 60.1
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 6.7e-69 265.0 216 59.3
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 6.7e-69 265.0 224 60.7
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 8.7e-69 264.6 224 60.3
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 3.3e-68 262.7 220 59.5
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 7.4e-68 261.5 215 58.1
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 1.3e-67 260.8 175 68.0
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 2.1e-67 260.0 215 60.0
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 2.8e-67 259.6 217 59.0
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 2.8e-67 259.6 265 52.5
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 2.8e-67 259.6 220 59.5
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 6.2e-67 258.5 250 53.2
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 6.2e-67 258.5 265 50.6
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 8.1e-67 258.1 201 63.7
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 1.1e-66 257.7 219 58.0
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 3.1e-66 256.1 201 59.7
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 3.1e-66 256.1 214 58.4
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 3.1e-66 256.1 220 58.6
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 6.9e-66 255.0 212 57.1
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 6.9e-66 255.0 210 61.0
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 1.2e-65 254.2 265 50.6
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 3.4e-65 252.7 239 54.0
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.2e-64 250.0 174 65.5
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 4.2e-63 245.7 240 52.5
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 5.5e-63 245.4 181 66.3
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 7.1e-63 245.0 190 64.7
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 3.5e-62 242.7 215 55.3
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 6.0e-62 241.9 192 60.4
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 6.0e-62 241.9 192 60.9
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 5.1e-61 238.8 199 58.8
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 2.1e-59 233.4 187 63.1
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 3.7e-59 232.6 269 49.1
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 1.4e-58 230.7 180 64.4
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 1.8e-58 230.3 186 63.4
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 2.4e-58 229.9 187 62.6
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 2.1e-54 216.9 259 48.3
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 1.3e-53 214.2 242 50.4
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 2.5e-52 209.9 249 46.6
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 1.3e-51 207.6 286 44.4
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.6e-51 207.2 223 49.8
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 8.2e-51 204.9 172 58.7
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 5.9e-49 198.7 175 57.7
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 2.5e-47 193.4 255 42.0
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 1.6e-46 190.7 164 56.1
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 2.8e-43 179.9 264 39.8
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 1.2e-41 174.5 195 46.7
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 1.7e-40 170.6 125 65.6
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 2.9e-40 169.9 181 52.5
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.5e-39 166.8 139 64.0
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.0e-37 161.4 287 39.0
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 3.0e-37 159.8 261 41.0
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 8.8e-37 158.3 166 47.6
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 3.1e-34 149.8 93 76.3
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 5.3e-34 149.1 220 39.1
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 7.0e-34 148.7 93 76.3
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 1.6e-33 147.5 96 69.8
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 5.5e-31 139.0 134 50.0
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 6.1e-30 135.6 141 50.4
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 6.7e-29 132.1 220 36.8
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 7.5e-28 128.6 92 65.2
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 1.3e-27 127.9 146 45.2
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 3.5e-25 119.8 82 68.3
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 2.2e-24 117.1 98 54.1
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.0e-20 104.0 137 46.7
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 7.5e-20 102.1 61 75.4
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 1.1e-18 98.2 68 70.6
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 1.8e-13 80.9 168 34.5
BcaC01g05263 Brassica carinata HOM05D006222 ORTHO05D007677 1.7e-11 74.3 45 80.0
C03p28590 Brassica napus HOM05D006222 ORTHO05D007677 1.2e-06 58.2 51 56.9
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 2.8e-06 57.0 51 52.9


User provided reference genes

Program Settings