Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p02470 Brassica napus HOM05D004407 ORTHO05D005074 4.6e-70 267.7 129 100.0
BraA05t19240Z Brassica rapa HOM05D004407 ORTHO05D005074 1.9e-68 262.3 129 98.4
C04p02940 Brassica napus HOM05D004407 ORTHO05D005074 3.4e-65 251.5 127 96.1
BolC4t21934H Brassica oleracea HOM05D004407 ORTHO05D005074 3.4e-65 251.5 127 96.1
C04p02920 Brassica napus HOM05D004407 ORTHO05D005074 2.3e-53 212.2 127 80.3
BolC4t21933H Brassica oleracea HOM05D004407 ORTHO05D005074 2.3e-53 212.2 127 80.3
BraA05t19239Z Brassica rapa HOM05D004407 ORTHO05D005074 3.9e-53 211.5 131 79.4
A05p02450 Brassica napus HOM05D004407 ORTHO05D005074 9.7e-52 206.8 132 78.8
BcaNung02830 Brassica carinata HOM05D004407 ORTHO05D005074 3.1e-50 201.8 127 77.2
Thhalv10019315m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 5.3e-50 201.1 131 74.8
BcaNung02832 Brassica carinata HOM05D004407 ORTHO05D005074 2.2e-48 195.7 131 74.0
C04p02950 Brassica napus HOM05D004407 ORTHO05D005074 6.1e-46 187.6 127 72.4
BolC4t21935H Brassica oleracea HOM05D004407 ORTHO05D005074 6.1e-46 187.6 127 72.4
A05p02480 Brassica napus HOM05D004407 ORTHO05D005074 3.3e-44 181.8 127 70.9
BraA05t19241Z Brassica rapa HOM05D004407 ORTHO05D005074 3.3e-44 181.8 127 70.9
A05p02490 Brassica napus HOM05D004407 ORTHO05D005074 9.7e-44 180.3 127 71.7
BraA05t19242Z Brassica rapa HOM05D004407 ORTHO05D005074 9.7e-44 180.3 127 71.7
BcaNung02831 Brassica carinata HOM05D004407 ORTHO05D005074 1.2e-41 173.3 117 72.6
CARHR025870 Cardamine hirsuta HOM05D004407 ORTHO05D005074 1.6e-41 172.9 127 70.1
AT2G41730 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 1.2e-38 163.3 122 67.2
Sp4g23980 Schrenkiella parvula HOM05D004407 ORTHO05D005074 2.7e-38 162.2 119 68.1
BcaB07g31285 Brassica carinata HOM05D004407 ORTHO05D005074 2.6e-36 155.6 127 65.4
AL4G40040 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 1.3e-35 153.3 122 63.9
AT5G24640 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 2.3e-32 142.5 119 61.3
BcaC04g22350 Brassica carinata HOM05D004407 ORTHO05D005074 7.2e-31 137.5 127 59.1
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 5.2e-29 131.3 123 58.5
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 3.4e-28 128.6 123 57.7
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 1.3e-27 126.7 123 57.7
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 1.3e-27 126.7 123 57.7
Carub.0004s2401 Capsella rubella HOM05D004407 ORTHO05D005074 9.2e-26 120.6 114 60.5
Carub.0006s3296 Capsella rubella HOM05D004407 ORTHO05D005074 2.9e-24 115.5 126 54.8
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 2.5e-23 112.5 137 46.7
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 1.6e-22 109.8 137 45.3
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 2.3e-21 105.9 137 47.4
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 3.0e-21 105.5 127 44.9
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 2.0e-20 102.8 121 44.6
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 2.6e-20 102.4 128 46.9
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 3.4e-20 102.1 137 45.3
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 4.4e-20 101.7 139 45.3
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 4.4e-20 101.7 89 56.2
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 4.4e-20 101.7 127 45.7
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 5.7e-20 101.3 89 57.3
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 7.5e-20 100.9 131 43.5
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 9.8e-20 100.5 135 46.7
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.3e-19 100.1 136 42.6
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.2e-19 99.4 89 56.2
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 2.9e-19 99.0 132 45.5
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 2.9e-19 99.0 114 51.8
PSO832G4071 Papaver somniferum HOM05D004407 ORTHO05D005074 2.9e-19 99.0 137 43.1
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 4.9e-19 98.2 135 44.4
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 4.9e-19 98.2 144 42.4
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 4.9e-19 98.2 134 48.5
Cpa.g.sc130.51 Carica papaya HOM05D004407 ORTHO05D005074 6.4e-19 97.8 136 48.5
DCAR_015072 Daucus carota HOM05D004407 ORTHO05D005074 6.4e-19 97.8 133 43.6
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 6.4e-19 97.8 89 55.1
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 6.4e-19 97.8 135 45.2
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 1.1e-18 97.1 145 42.1
ClCG09G019590 Citrullus lanatus HOM05D004407 ORTHO05D005074 1.1e-18 97.1 117 46.2
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 1.1e-18 97.1 89 53.9
GSVIVG01003970001 Vitis vinifera HOM05D004407 ORTHO05D005074 1.1e-18 97.1 89 57.3
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 1.4e-18 96.7 89 53.9
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 1.4e-18 96.7 126 43.7
Carub.0006s3434 Capsella rubella HOM05D004407 ORTHO05D005074 1.8e-18 96.3 126 49.2
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 1.8e-18 96.3 138 44.2
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 1.8e-18 96.3 134 47.8
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 1.8e-18 96.3 134 47.8
DCAR_015074 Daucus carota HOM05D004407 ORTHO05D005074 2.4e-18 95.9 87 54.0
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 2.4e-18 95.9 86 54.7
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 2.4e-18 95.9 86 54.7
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 2.4e-18 95.9 135 43.7
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 3.2e-18 95.5 89 56.2
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.2e-18 95.5 87 56.3
PSO063G0264 Papaver somniferum HOM05D004407 ORTHO05D005074 3.2e-18 95.5 129 43.4
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 3.2e-18 95.5 127 45.7
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 4.1e-18 95.1 89 52.8
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 4.1e-18 95.1 136 43.4
Sed0009704 Sechium edule HOM05D004407 ORTHO05D005074 4.1e-18 95.1 87 55.2
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 5.4e-18 94.7 135 44.4
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 5.4e-18 94.7 132 42.4
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 5.4e-18 94.7 87 56.3
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 5.4e-18 94.7 87 56.3
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 5.4e-18 94.7 87 56.3
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 5.4e-18 94.7 89 52.8
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 5.4e-18 94.7 137 43.1
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 7.0e-18 94.4 134 44.8
COL.COLO4_29257 Corchorus olitorius HOM05D004407 ORTHO05D005074 7.0e-18 94.4 87 54.0
MELO3C021614.2 Cucumis melo HOM05D004407 ORTHO05D005074 7.0e-18 94.4 86 54.7
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 7.0e-18 94.4 89 51.7
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 9.2e-18 94.0 128 46.1
CsaV3_5G026800 Cucumis sativus L. HOM05D004407 ORTHO05D005074 9.2e-18 94.0 86 54.7
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 1.2e-17 93.6 89 55.1
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 1.6e-17 93.2 123 47.2
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 1.6e-17 93.2 135 44.4
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 1.6e-17 93.2 134 44.0
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.6e-17 93.2 89 53.9
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 1.6e-17 93.2 129 43.4
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 2.0e-17 92.8 137 43.8
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 2.0e-17 92.8 89 51.7
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.0e-17 92.8 127 46.5
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.7e-17 92.4 127 46.5
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 2.7e-17 92.4 96 50.0
Migut.K01432 Erythranthe guttata HOM05D004407 ORTHO05D005074 3.5e-17 92.0 112 45.5
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.5e-17 92.0 85 55.3
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 3.5e-17 92.0 86 53.5
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 4.6e-17 91.7 134 44.0
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 5.9e-17 91.3 128 43.0
Sed0005342 Sechium edule HOM05D004407 ORTHO05D005074 1.0e-16 90.5 86 52.3
SGA_v2.0_scaffold47G17536 Striga asiatica HOM05D004407 ORTHO05D005074 1.0e-16 90.5 87 50.6
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.3e-16 90.1 127 45.7
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 1.7e-16 89.7 89 49.4
PSO407G0367 Papaver somniferum HOM05D004407 ORTHO05D005074 1.7e-16 89.7 87 52.9
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 2.3e-16 89.4 84 56.0
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 5.0e-16 88.2 127 44.1
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 5.0e-16 88.2 92 51.1
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 5.0e-16 88.2 84 54.8
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 6.6e-16 87.8 113 42.5
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 6.6e-16 87.8 89 51.7
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 1.1e-15 87.0 139 44.6
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 2.5e-15 85.9 86 50.0
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 2.5e-15 85.9 139 40.3
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 2.5e-15 85.9 89 53.9
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 3.3e-15 85.5 84 53.6
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 4.3e-15 85.1 89 48.3
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 7.3e-15 84.3 90 47.8
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 7.3e-15 84.3 81 54.3
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 1.6e-14 83.2 126 41.3
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 2.8e-14 82.4 90 50.0
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 2.8e-14 82.4 90 50.0
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 3.6e-14 82.0 96 44.8
MSTRG.24058 Avicennia marina HOM05D004407 ORTHO05D005074 4.7e-14 81.6 88 46.6
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 6.2e-14 81.3 89 50.6
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 6.2e-14 81.3 89 50.6
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 6.2e-14 81.3 89 52.8
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 8.0e-14 80.9 86 52.3
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 1.1e-13 80.5 104 44.2
Potri.001G336200 Populus trichocarpa HOM05D004407 ORTHO05D005074 3.1e-13 79.0 90 44.4
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 6.8e-13 77.8 126 39.7
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 2.6e-12 75.9 129 40.3
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 4.4e-12 75.1 93 43.0
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 5.8e-12 74.7 69 55.1
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 9.8e-12 73.9 135 40.0
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 1.3e-11 73.6 136 38.2
Migut.H00046 Erythranthe guttata HOM05D004407 ORTHO05D005074 2.9e-11 72.4 133 40.6
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 4.9e-11 71.6 135 37.8
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 4.9e-11 71.6 134 36.6
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 8.3e-11 70.9 142 36.6
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 1.1e-10 70.5 121 35.5
Gohir.D11G069800 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.4e-10 70.1 135 34.8
Gorai.007G074900 Gossypium raimondii HOM05D004407 ORTHO05D005074 2.4e-10 69.3 87 43.7
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 3.2e-10 68.9 88 40.9
Solyc02g067935.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 3.2e-10 68.9 72 47.2
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 3.2e-10 68.9 119 39.5
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 5.4e-10 68.2 89 41.6
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 5.4e-10 68.2 135 35.6
HPP92_009916 Vanilla planifolia HOM05D004407 ORTHO05D005074 1.2e-09 67.0 89 42.7
Thhalv10028030m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 4.6e-09 65.1 91 42.9
HPP92_009915 Vanilla planifolia HOM05D004407 ORTHO05D005074 2.3e-08 62.8 84 44.0
HanXRQChr14g0451031 Helianthus annuus HOM05D004407 ORTHO05D005074 6.6e-08 61.2 131 35.9
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 6.6e-08 61.2 139 33.8
SGA_v2.0_scaffold154G37145 Striga asiatica HOM05D002760 ORTHO05D003169 1.1e-07 60.5 65 49.2
Medtr4g061650 Medicago truncatula HOM05D004407 ORTHO05D005074 7.3e-07 57.8 53 54.7


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