Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 9.5e-144 513.5 253 100.0
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 2.8e-143 511.9 253 99.6
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 7.6e-133 477.2 255 94.5
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.2e-130 469.9 256 93.8
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 2.4e-118 429.1 255 83.9
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 5.4e-115 417.9 252 83.7
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 5.3e-110 401.4 248 81.5
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 1.4e-107 393.3 253 79.1
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 1.6e-106 389.8 249 78.7
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 2.1e-106 389.4 241 81.7
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 2.9e-100 369.0 249 73.9
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 1.3e-97 360.1 180 98.3
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 4.3e-96 355.1 238 71.8
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.7e-96 354.8 239 71.1
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 1.6e-95 353.2 239 70.7
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.6e-95 353.2 239 70.7
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 1.4e-94 350.1 240 69.2
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.4e-94 350.1 241 71.0
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 1.4e-94 350.1 201 81.1
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 1.8e-94 349.7 205 78.0
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 1.5e-93 346.7 242 71.1
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 5.9e-93 344.7 253 69.6
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.3e-92 343.6 241 69.3
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 2.9e-92 342.4 203 75.9
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 6.5e-92 341.3 207 75.8
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 8.5e-92 340.9 240 67.5
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 4.2e-91 338.6 253 66.4
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 4.2e-91 338.6 238 70.6
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 9.3e-91 337.4 253 66.8
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 4.6e-90 335.1 198 76.8
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 4.6e-90 335.1 205 75.6
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 1.0e-89 334.0 199 77.4
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.0e-89 334.0 253 66.4
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.3e-89 333.6 206 74.3
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 1.3e-89 333.6 231 70.1
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 1.8e-89 333.2 201 77.6
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 3.0e-89 332.4 211 74.9
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 3.0e-89 332.4 237 68.8
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 5.1e-89 331.6 238 68.5
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 6.7e-89 331.3 178 88.8
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 1.5e-88 330.1 206 72.8
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 3.3e-88 328.9 238 67.6
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 4.3e-88 328.6 203 75.4
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 4.3e-88 328.6 202 74.8
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.6e-87 326.6 202 75.2
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.6e-87 326.6 202 75.2
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 2.8e-87 325.9 200 76.5
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.8e-87 325.9 204 75.0
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 3.7e-87 325.5 206 71.8
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 4.8e-87 325.1 232 66.4
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 6.3e-87 324.7 202 74.8
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 6.3e-87 324.7 201 74.1
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 1.1e-86 323.9 202 74.8
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 1.8e-86 323.2 200 75.0
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 2.4e-86 322.8 201 73.6
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 2.4e-86 322.8 235 66.4
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 3.1e-86 322.4 235 65.5
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 5.3e-86 321.6 200 74.5
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 5.3e-86 321.6 201 73.6
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 9.1e-86 320.9 208 72.6
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 1.2e-85 320.5 248 64.5
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 1.2e-85 320.5 211 69.7
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 1.5e-85 320.1 200 75.0
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.0e-85 319.7 239 66.5
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 2.6e-85 319.3 201 73.1
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 5.9e-85 318.2 232 67.2
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 5.9e-85 318.2 203 72.4
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 7.7e-85 317.8 205 72.2
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 1.0e-84 317.4 199 72.9
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 1.0e-84 317.4 233 66.5
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 1.0e-84 317.4 223 66.8
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 2.9e-84 315.8 202 72.3
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 5.0e-84 315.1 206 72.8
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.5e-84 314.7 204 73.5
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 4.2e-83 312.0 185 77.3
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 1.2e-82 310.5 244 64.3
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 6.1e-82 308.1 237 64.6
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.0e-81 307.4 275 58.5
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 1.5e-80 303.5 199 71.4
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 2.0e-80 303.1 194 74.2
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 5.7e-80 301.6 204 69.1
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 7.4e-80 301.2 232 63.8
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 9.7e-80 300.8 199 70.9
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 1.3e-79 300.4 233 63.9
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 3.7e-79 298.9 248 62.9
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 4.8e-79 298.5 175 78.3
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 2.4e-78 296.2 181 74.0
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 6.9e-78 294.7 195 70.3
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 9.1e-78 294.3 204 67.6
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 3.4e-77 292.4 206 68.0
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 3.8e-76 288.9 175 77.7
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 3.8e-76 288.9 167 78.4
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 3.8e-76 288.9 250 60.0
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 9.4e-75 284.3 207 66.2
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 1.0e-73 280.8 201 67.2
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 2.6e-69 266.2 171 71.9
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 3.5e-69 265.8 167 73.1
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 2.2e-63 246.5 207 58.5
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 8.5e-60 234.6 201 58.7
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.4e-57 227.3 178 62.9
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 2.8e-55 219.5 171 57.9
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.7e-55 219.2 135 74.1
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 1.4e-54 217.2 197 53.3
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 7.7e-53 211.5 199 50.8
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.8e-38 163.7 134 62.7
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 4.3e-35 152.5 208 44.7
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 5.2e-25 119.0 241 35.7
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.4e-22 110.9 63 77.8
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 7.1e-22 108.6 71 70.4
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 3.5e-21 106.3 59 78.0
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 6.0e-21 105.5 170 39.4
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.3e-19 99.8 84 61.9
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 1.6e-10 70.9 62 53.2


User provided reference genes

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