Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p34940 Brassica napus HOM05D002637 ORTHO05D015500 1.5e-46 189.1 90 100.0
BcaC02g06975 Brassica carinata HOM05D002637 ORTHO05D015500 7.3e-38 160.2 91 84.6
C04p72790 Brassica napus HOM05D002637 ORTHO05D015500 7.3e-38 160.2 91 84.6
BolC4t28760H Brassica oleracea HOM05D002637 ORTHO05D015500 7.3e-38 160.2 91 84.6
BolC4t28696H Brassica oleracea HOM05D002637 ORTHO05D015500 2.8e-37 158.3 91 83.5
BraA03t15227Z Brassica rapa HOM05D002637 ORTHO05D015500 8.9e-36 153.3 86 82.6
A03p61900 Brassica napus HOM05D002637 ORTHO05D015500 1.2e-35 152.9 86 82.6
BcaB06g29411 Brassica carinata HOM05D002637 ORTHO05D015500 1.7e-23 112.5 84 64.3
C04p72670 Brassica napus HOM05D002637 ORTHO05D015500 5.1e-23 110.9 84 66.7
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 2.1e-21 105.5 82 63.4
A01p01530 Brassica napus HOM05D002637 ORTHO05D016052 6.8e-20 100.5 74 66.2
C01p02830 Brassica napus HOM05D002637 ORTHO05D016052 2.6e-19 98.6 82 58.5
C01p02860 Brassica napus HOM05D002637 ORTHO05D016052 7.6e-19 97.1 73 65.8
C04p71980 Brassica napus HOM05D002637 ORTHO05D015500 2.9e-18 95.1 51 88.2
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 6.4e-18 94.0 84 54.8
C01p02840 Brassica napus HOM05D002637 ORTHO05D016052 6.4e-18 94.0 75 60.0
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 6.4e-18 94.0 84 54.8
C01p23540 Brassica napus HOM05D002637 ORTHO05D015500 1.1e-17 93.2 78 57.7
BolC1t00272H Brassica oleracea HOM05D002637 ORTHO05D016052 1.9e-17 92.4 75 60.0
BolC1t00270H Brassica oleracea HOM05D002637 ORTHO05D016052 4.2e-17 91.3 75 58.7
BcaNung00759 Brassica carinata HOM05D002637 ORTHO05D016052 3.5e-16 88.2 75 60.0
A08p02290 Brassica napus HOM05D021878 ORTHO05D024469 5.1e-15 84.3 78 56.4
BraSC79t46681Z Brassica rapa HOM05D002637 ORTHO05D015500 5.6e-14 80.9 61 65.6
BcaC09g48422 Brassica carinata HOM05D021878 ORTHO05D024469 1.2e-13 79.7 69 58.0
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 7.6e-11 70.5 69 55.1
AL3G38360 Arabidopsis lyrata HOM05D001636 ORTHO05D018456 1.3e-07 59.7 69 42.0
BcaC02g12798 Brassica carinata HOM05D001636 ORTHO05D018456 3.9e-07 58.2 68 44.1
BNapus_Darmor_BZH_scaffold_188p00110 Brassica napus HOM05D001636 ORTHO05D018456 3.9e-07 58.2 68 44.1
C04p00350 Brassica napus HOM05D001636 ORTHO05D018456 3.9e-07 58.2 68 44.1
BolC4t21677H Brassica oleracea HOM05D001636 ORTHO05D018456 3.9e-07 58.2 68 44.1
BraA05t18996Z Brassica rapa HOM05D001636 ORTHO05D018456 3.9e-07 58.2 68 44.1
Carub.0006s0379 Capsella rubella HOM05D001636 ORTHO05D009134 3.9e-07 58.2 76 39.5
BcaC02g12800 Brassica carinata HOM05D001636 ORTHO05D018456 5.1e-07 57.8 69 42.0
AL1G11090 Arabidopsis lyrata HOM05D001456 ORTHO05D011036 6.6e-07 57.4 77 40.3
BcaB06g29167 Brassica carinata HOM05D001636 ORTHO05D009134 6.6e-07 57.4 68 42.6
BolSC55t61225H Brassica oleracea HOM05D001636 ORTHO05D018456 1.5e-06 56.2 69 40.6
Carub.0006s3667 Capsella rubella HOM05D001636 ORTHO05D013186 1.5e-06 56.2 86 37.2
CARHR113000 Cardamine hirsuta HOM05D001456 ORTHO05D011036 1.5e-06 56.2 90 43.3
Carub.0001s0454 Capsella rubella HOM05D001636 ORTHO05D013186 2.5e-06 55.5 78 37.2
A03p55270 Brassica napus HOM05D001636 ORTHO05D009134 7.3e-06 53.9 78 37.2
BraA03t14586Z Brassica rapa HOM05D001636 ORTHO05D009134 7.3e-06 53.9 78 37.2
BcaNung01309 Brassica carinata HOM05D001456 ORTHO05D031996 9.6e-06 53.5 69 40.6
C01p00030 Brassica napus HOM05D001456 ORTHO05D031996 9.6e-06 53.5 69 40.6
BolC1t00009H Brassica oleracea HOM05D001456 ORTHO05D031996 9.6e-06 53.5 69 40.6


User provided reference genes

Program Settings