Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 1.6e-82 309.3 145 100.0
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 1.7e-57 226.1 145 77.9
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 1.7e-57 226.1 145 77.9
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 8.4e-36 154.1 98 77.6
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 8.4e-36 154.1 104 74.0
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 1.9e-35 152.9 98 76.5
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 9.3e-35 150.6 98 75.5
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 5.1e-33 144.8 97 72.2
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.9e-32 142.9 98 72.4
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 3.3e-32 142.1 98 70.4
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 4.3e-32 141.7 98 71.4
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 4.3e-32 141.7 98 71.4
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 4.3e-32 141.7 98 71.4
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 5.6e-32 141.4 98 68.4
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 9.6e-32 140.6 97 72.2
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 2.1e-31 139.4 98 68.4
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.1e-30 137.1 98 66.3
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 1.1e-30 137.1 98 66.3
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 1.8e-30 136.3 98 69.4
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.8e-30 136.3 98 66.3
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 5.3e-30 134.8 98 64.3
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 6.9e-30 134.4 98 64.3
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 1.5e-29 133.3 98 63.3
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 2.6e-29 132.5 98 66.3
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 3.4e-29 132.1 98 64.3
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 7.6e-29 131.0 98 61.2
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 1.3e-28 130.2 98 61.2
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 2.2e-28 129.4 98 61.2
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 2.9e-28 129.0 98 63.3
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 1.1e-27 127.1 98 62.2
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 1.1e-27 127.1 97 59.8
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 1.4e-27 126.7 98 63.3
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 1.4e-27 126.7 98 60.2
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 1.4e-27 126.7 98 61.2
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 1.9e-27 126.3 98 60.2
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.9e-27 126.3 97 60.8
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 2.4e-27 125.9 104 58.7
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 3.2e-27 125.6 98 61.2
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 4.2e-27 125.2 98 59.2
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 4.2e-27 125.2 98 59.2
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 4.2e-27 125.2 104 58.7
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 5.5e-27 124.8 97 59.8
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 7.1e-27 124.4 98 59.2
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 7.1e-27 124.4 98 60.2
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 1.2e-26 123.6 98 57.1
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 1.2e-26 123.6 98 57.1
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.6e-26 123.2 98 59.2
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 1.6e-26 123.2 98 58.2
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 1.6e-26 123.2 97 58.8
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 2.1e-26 122.9 98 58.2
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 2.1e-26 122.9 98 58.2
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 2.7e-26 122.5 98 60.2
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 4.6e-26 121.7 98 58.2
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 6.0e-26 121.3 98 59.2
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 6.0e-26 121.3 98 59.2
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 7.9e-26 120.9 98 56.1
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 7.9e-26 120.9 97 56.7
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.0e-25 120.6 97 57.7
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 1.0e-25 120.6 98 57.1
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.3e-25 120.2 98 56.1
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.3e-25 120.2 98 56.1
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 1.8e-25 119.8 99 56.6
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.8e-25 119.8 97 56.7
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 2.3e-25 119.4 98 58.2
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 2.3e-25 119.4 98 57.1
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 2.3e-25 119.4 98 56.1
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 3.0e-25 119.0 98 56.1
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 3.0e-25 119.0 98 55.1
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.0e-25 119.0 98 55.1
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.0e-25 119.0 98 55.1
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 3.0e-25 119.0 98 58.2
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 3.0e-25 119.0 97 56.7
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.9e-25 118.6 98 55.1
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.9e-25 118.6 98 55.1
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 3.9e-25 118.6 96 58.3
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 5.1e-25 118.2 98 59.2
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 6.7e-25 117.9 98 56.1
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 6.7e-25 117.9 98 55.1
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.1e-24 117.1 98 57.1
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 1.1e-24 117.1 98 57.1
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 1.1e-24 117.1 98 55.1
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 1.1e-24 117.1 98 56.1
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 1.1e-24 117.1 98 57.1
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.1e-24 117.1 106 53.8
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 1.5e-24 116.7 98 56.1
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.3e-24 115.5 98 54.1
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 3.3e-24 115.5 98 55.1
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 4.3e-24 115.2 97 57.7
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 5.6e-24 114.8 97 56.7
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 5.6e-24 114.8 98 55.1
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 5.6e-24 114.8 98 56.1
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 5.6e-24 114.8 98 54.1
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 9.6e-24 114.0 98 56.1
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.3e-23 113.6 98 56.1
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 2.1e-23 112.8 104 51.9
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 8.2e-23 110.9 98 55.1
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 2.6e-21 105.9 98 53.1
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 3.4e-21 105.5 98 54.1
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 2.2e-20 102.8 97 47.4
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 2.2e-20 102.8 98 49.0
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 2.9e-20 102.4 97 49.5
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 1.6e-18 96.7 65 67.7
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 9.7e-16 87.4 101 48.5
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 2.8e-15 85.9 97 40.2
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 4.8e-15 85.1 97 42.3
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 1.1e-14 84.0 65 56.9
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 2.4e-14 82.8 97 41.2
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 1.2e-13 80.5 68 57.4
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.2e-10 70.5 126 33.3
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 2.1e-10 69.7 99 37.4
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 3.0e-09 65.9 62 50.0
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 3.9e-09 65.5 97 36.1
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 1.1e-06 57.4 97 34.0


User provided reference genes

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