Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p34180 Brassica napus HOM05D001925 ORTHO05D004257 5.0e-131 471.1 234 100.0
BraA04t18879Z Brassica rapa HOM05D001925 ORTHO05D004257 5.0e-131 471.1 234 100.0
C04p71970 Brassica napus HOM05D001925 ORTHO05D004257 5.4e-101 371.3 238 82.4
BolC4t28695H Brassica oleracea HOM05D001925 ORTHO05D004257 5.4e-93 344.7 243 77.4
Sp4g28050 Schrenkiella parvula HOM05D001925 ORTHO05D004257 5.4e-93 344.7 273 72.2
AL4G45210 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 1.7e-86 323.2 263 66.5
Thhalv10001583m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 1.7e-83 313.2 276 65.2
AT2G45980 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 8.7e-83 310.8 261 66.7
BraA05t19560Z Brassica rapa HOM05D001925 ORTHO05D004257 1.6e-81 306.6 254 68.5
A05p05970 Brassica napus HOM05D001925 ORTHO05D004257 4.8e-81 305.1 254 68.1
Carub.0004s2868 Capsella rubella HOM05D001925 ORTHO05D004257 2.4e-80 302.8 264 63.3
CARHR141250 Cardamine hirsuta HOM05D001925 ORTHO05D004257 6.0e-76 288.1 262 62.6
C04p06900 Brassica napus HOM05D001925 ORTHO05D004257 1.3e-75 287.0 263 63.5
BolC4t22311H Brassica oleracea HOM05D001925 ORTHO05D004257 1.3e-75 287.0 263 63.5
Aa31LG1G27390 Aethionema arabicum HOM05D001925 ORTHO05D004257 5.1e-67 258.5 256 58.2
THA.LOC104802035 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 8.2e-49 198.0 249 45.8
THA.LOC104817300 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 8.2e-49 198.0 274 46.4
Cpa.g.sc11.19 Carica papaya HOM05D001925 ORTHO05D004257 3.4e-47 192.6 283 43.8
Manes.01G255700 Manihot esculenta HOM05D001925 ORTHO05D004257 3.3e-42 176.0 282 43.3
Dinv32493 Davidia involucrata HOM05D001925 ORTHO05D004257 7.4e-42 174.9 310 39.0
THA.LOC104825845 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 9.7e-42 174.5 279 41.2
Sopen01g038550 Solanum pennellii HOM05D001925 ORTHO05D004257 2.8e-41 172.9 265 37.7
Manes.05G033200 Manihot esculenta HOM05D001925 ORTHO05D004257 6.3e-41 171.8 283 40.3
GSVIVG01026948001 Vitis vinifera HOM05D001925 ORTHO05D004257 6.3e-41 171.8 247 44.5
CANSAT21G1319 Cannabis sativa HOM05D001925 ORTHO05D004257 1.1e-40 171.0 308 38.3
vmacro20933 Vaccinium macrocarpon HOM05D001925 ORTHO05D004257 1.1e-40 171.0 294 38.1
Potri.014G086000 Populus trichocarpa HOM05D001925 ORTHO05D004257 2.4e-40 169.9 305 38.4
Cc02_g38170 Coffea canephora HOM05D001925 ORTHO05D004257 6.9e-40 168.3 307 38.1
MELO3C006104.2 Cucumis melo HOM05D001925 ORTHO05D004257 1.2e-39 167.5 293 39.2
Sabra14G0062300 Salix brachista HOM05D001925 ORTHO05D004257 2.6e-39 166.4 305 38.0
SalBow8G4919 Salvia bowleyana HOM05D001925 ORTHO05D004257 2.6e-39 166.4 307 40.4
PGR031G2850 Punica granatum HOM05D001925 ORTHO05D004257 4.5e-39 165.6 296 37.8
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 7.7e-39 164.9 307 37.5
Ciclev10021244m.g Citrus clementina HOM05D001925 ORTHO05D004257 2.9e-38 162.9 311 38.3
Atru.chr5.510 Acer truncatum HOM05D001925 ORTHO05D004257 3.8e-38 162.5 313 38.7
Gohir.A11G089800 Gossypium hirsutum HOM05D001925 ORTHO05D004257 3.8e-38 162.5 302 37.7
Nitab4.5_0000583g0190 Nicotiana tabacum HOM05D001925 ORTHO05D004257 3.8e-38 162.5 279 39.8
Thecc.01G357700 Theobroma cacao HOM05D001925 ORTHO05D004257 3.8e-38 162.5 298 39.3
Aa31LG5G590 Aethionema arabicum HOM05D001925 ORTHO05D004257 5.0e-38 162.2 293 38.2
Duzib133G0433 Durio zibethinus HOM05D001925 ORTHO05D004257 5.0e-38 162.2 306 38.2
CSS0032978 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D004257 6.5e-38 161.8 313 37.7
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 6.5e-38 161.8 305 38.0
Gorai.007G100500 Gossypium raimondii HOM05D001925 ORTHO05D004257 6.5e-38 161.8 296 38.2
CsaV3_3G008850 Cucumis sativus L. HOM05D001925 ORTHO05D004257 8.5e-38 161.4 293 38.9
Duzib138G1880 Durio zibethinus HOM05D001925 ORTHO05D004257 1.1e-37 161.0 309 38.2
Nitab4.5_0006018g0030 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.1e-37 161.0 284 38.7
PGSC0003DMG400000175 Solanum tuberosum HOM05D001925 ORTHO05D004257 1.1e-37 161.0 304 35.2
MSTRG.14225 Avicennia marina HOM05D001925 ORTHO05D004257 1.4e-37 160.6 301 34.6
ClCG05G001470 Citrullus lanatus HOM05D001925 ORTHO05D004257 1.4e-37 160.6 296 38.2
Sed0006621 Sechium edule HOM05D001925 ORTHO05D004257 1.4e-37 160.6 288 36.5
Eucgr.D02304 Eucalyptus grandis HOM05D001925 ORTHO05D004257 2.5e-37 159.8 304 37.2
Sp6g00430 Schrenkiella parvula HOM05D001925 ORTHO05D004257 2.5e-37 159.8 285 37.5
CAN.G78.91 Capsicum annuum HOM05D001925 ORTHO05D004257 4.2e-37 159.1 305 34.4
MD01G1065100 Malus domestica HOM05D001925 ORTHO05D004257 4.2e-37 159.1 295 37.3
Gohir.D11G094100 Gossypium hirsutum HOM05D001925 ORTHO05D004257 5.5e-37 158.7 296 38.2
Sed0020685 Sechium edule HOM05D001925 ORTHO05D004257 5.5e-37 158.7 284 37.7
Migut.M00740 Erythranthe guttata HOM05D001925 ORTHO05D004257 9.4e-37 157.9 306 35.6
MD07G1135300 Malus domestica HOM05D001925 ORTHO05D004257 9.4e-37 157.9 293 35.5
Sc26g0000880 Simmondsia chinensis HOM05D001925 ORTHO05D004257 9.4e-37 157.9 276 36.2
CARHR248450 Cardamine hirsuta HOM05D001925 ORTHO05D004257 1.2e-36 157.5 277 37.5
Peaxi162Scf00020g00730 Petunia axillaris HOM05D001925 ORTHO05D004257 1.6e-36 157.1 305 35.7
TAR375G1105 Trochodendron aralioides HOM05D001925 ORTHO05D004257 3.6e-36 156.0 314 35.0
Actinidia02837 Actinidia chinensis HOM05D001925 ORTHO05D004257 4.7e-36 155.6 313 35.5
TWI23G0808 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 7.9e-36 154.8 307 33.9
CiPaw.01G062900 Carya illinoinensis HOM05D001925 ORTHO05D004257 1.0e-35 154.5 265 39.2
Lj1g0025308 Lotus japonicus HOM05D001925 ORTHO05D004257 1.0e-35 154.5 309 37.9
TAR629G3070 Trochodendron aralioides HOM05D001925 ORTHO05D004257 1.4e-35 154.1 312 36.2
Nn1g01562 Nelumbo nucifera HOM05D001925 ORTHO05D004257 2.3e-35 153.3 316 36.4
Phvul.008G061700 Phaseolus vulgaris HOM05D001925 ORTHO05D004257 2.3e-35 153.3 313 37.7
Thhalv10029186m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 6.7e-35 151.8 288 37.5
Sabra02G0127500 Salix brachista HOM05D001925 ORTHO05D004257 8.8e-35 151.4 304 38.8
Ca_07929_v3 Cicer arietinum L. HOM05D001925 ORTHO05D004257 1.1e-34 151.0 310 36.1
FvH4_7g14520 Fragaria vesca HOM05D001925 ORTHO05D004257 1.5e-34 150.6 310 36.8
THA.LOC104817027 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 2.0e-34 150.2 235 41.3
Prupe.2G172100 Prunus persica HOM05D001925 ORTHO05D004257 2.6e-34 149.8 308 35.7
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.3e-34 149.4 308 36.4
FAN06G4809 Fragaria x ananassa HOM05D001925 ORTHO05D004257 3.3e-34 149.4 310 36.5
Glyma.09G258600 Glycine max HOM05D001925 ORTHO05D004257 4.4e-34 149.1 318 36.2
Glyma.18G234100 Glycine max HOM05D001925 ORTHO05D004257 4.4e-34 149.1 302 38.4
TPR.G37799 Trifolium pratense HOM05D001925 ORTHO05D004257 4.4e-34 149.1 314 34.1
AT4G00355 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 5.7e-34 148.7 265 38.1
FAN06G3089 Fragaria x ananassa HOM05D001925 ORTHO05D004257 7.4e-34 148.3 310 36.5
Oeu005388.3 Olea europaea HOM05D001925 ORTHO05D004257 9.7e-34 147.9 294 36.7
RcHm_v2.0_Chr1g0355951 Rosa chinensis HOM05D001925 ORTHO05D004257 9.7e-34 147.9 310 37.1
Medtr7g077860 Medicago truncatula HOM05D001925 ORTHO05D004257 1.3e-33 147.5 316 35.1
VMungo1383G2450 Vigna mungo HOM05D001925 ORTHO05D004257 1.3e-33 147.5 312 36.2
Potri.002G160700 Populus trichocarpa HOM05D001925 ORTHO05D004257 2.2e-33 146.7 298 37.9
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 2.8e-33 146.4 332 33.4
FAN10G1179 Fragaria x ananassa HOM05D001925 ORTHO05D004257 3.7e-33 146.0 310 35.5
Nn6g33385 Nelumbo nucifera HOM05D001925 ORTHO05D004257 3.7e-33 146.0 320 35.6
Rhsim01G0159000 Rhododendron simsii HOM05D001925 ORTHO05D004257 3.7e-33 146.0 241 41.5
FAN10G2559 Fragaria x ananassa HOM05D001925 ORTHO05D004257 6.3e-33 145.2 311 35.4
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 6.3e-33 145.2 330 33.0
Ah.05g180510 Amaranthus hybridus HOM05D001925 ORTHO05D004257 1.8e-32 143.7 308 33.1
Lalb_Chr23g0275821 Lupinus albus HOM05D001925 ORTHO05D004257 1.8e-32 143.7 311 34.7
QL04p053608 Quercus lobata HOM05D001925 ORTHO05D004257 1.8e-32 143.7 268 38.4
FAN03G0610 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.4e-32 143.3 311 35.4
unitig_749.g13536 Utricularia gibba HOM05D001925 ORTHO05D004257 2.4e-32 143.3 284 36.6
Carub.0006s3688 Capsella rubella HOM05D001925 ORTHO05D004257 3.1e-32 142.9 277 36.1
Lj9A584T67 Lonicera japonica HOM05D001925 ORTHO05D004257 4.1e-32 142.5 258 38.8
AL6G53090 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 1.6e-31 140.6 282 37.6
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 1.6e-31 140.6 277 37.5
MBI18_g02843_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 1.6e-31 140.6 312 32.4
Sc23g0002810 Simmondsia chinensis HOM05D001925 ORTHO05D004257 2.6e-31 139.8 227 41.0
Oeu031215.1 Olea europaea HOM05D001925 ORTHO05D004257 4.5e-31 139.0 305 33.8
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea HOM05D001925 ORTHO05D004257 7.7e-31 138.3 307 36.2
BcaC01g06884 Brassica carinata HOM05D001925 ORTHO05D004257 7.7e-31 138.3 251 35.9
HanXRQChr13g0426611 Helianthus annuus HOM05D001925 ORTHO05D004257 7.7e-31 138.3 211 39.3
Nitab4.5_0008206g0010 Nicotiana tabacum HOM05D001925 ORTHO05D004257 7.7e-31 138.3 302 31.5
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea HOM05D001925 ORTHO05D004257 1.0e-30 137.9 308 36.0
CiPaw.02G032000 Carya illinoinensis HOM05D001925 ORTHO05D004257 1.0e-30 137.9 276 38.4
Aqoxy7G00278 Aquilegia oxysepala HOM05D001925 ORTHO05D004257 1.3e-30 137.5 310 34.8
SGA_v2.0_scaffold55G19707 Striga asiatica HOM05D001925 ORTHO05D004257 1.7e-30 137.1 228 39.9
Oeu061351.3 Olea europaea HOM05D001925 ORTHO05D004257 2.2e-30 136.7 227 39.6
BolC3t16197H Brassica oleracea HOM05D001925 ORTHO05D004257 3.8e-30 136.0 249 36.5
C03p39260 Brassica napus HOM05D001925 ORTHO05D004257 6.5e-30 135.2 251 38.6
PGR042G2528 Punica granatum HOM05D001925 ORTHO05D004257 8.5e-30 134.8 319 35.4
HPP92_025783 Vanilla planifolia HOM05D001925 ORTHO05D004257 8.5e-30 134.8 249 35.7
Sopen10g006250 Solanum pennellii HOM05D001925 ORTHO05D004257 2.5e-29 133.3 302 30.8
TAR374G1741 Trochodendron aralioides HOM05D001925 ORTHO05D004257 2.5e-29 133.3 315 32.7
PSO782G1204 Papaver somniferum HOM05D001925 ORTHO05D004257 4.2e-29 132.5 289 29.8
Nitab4.5_0000386g0060 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.6e-28 130.6 303 32.7
TAR636G0324 Trochodendron aralioides HOM05D001925 ORTHO05D004257 3.6e-28 129.4 248 37.5
PSO017G3573 Papaver somniferum HOM05D001925 ORTHO05D004257 4.7e-28 129.0 279 35.5
TWI59G0730 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 4.7e-28 129.0 274 35.8
Solyc10g012420.3 Solanum lycopersicum HOM05D001925 ORTHO05D004257 6.1e-28 128.6 302 29.8
PSO478G2649 Papaver somniferum HOM05D001925 ORTHO05D004257 8.0e-28 128.3 294 32.7
BcaB01g02169 Brassica carinata HOM05D001925 ORTHO05D004257 1.0e-27 127.9 265 34.0
AUR62022581 Chenopodium quinoa HOM05D001925 ORTHO05D004257 1.0e-27 127.9 262 34.4
A03p32220 Brassica napus HOM05D001925 ORTHO05D004257 1.8e-27 127.1 262 34.7
BraA03t12392Z Brassica rapa HOM05D001925 ORTHO05D004257 1.8e-27 127.1 262 34.7
Actinidia10041 Actinidia chinensis HOM05D001925 ORTHO05D004257 4.0e-27 125.9 273 35.2
Peaxi162Scf00008g02423 Petunia axillaris HOM05D001925 ORTHO05D004257 4.0e-27 125.9 301 31.2
Psat3g108000 Pisum sativum HOM05D001925 ORTHO05D004257 9.7e-26 121.3 280 33.2
CAN.G116.9 Capsicum annuum HOM05D001925 ORTHO05D004257 1.3e-25 120.9 302 33.8
Lalb_Chr11g0072911 Lupinus albus HOM05D001925 ORTHO05D004257 2.2e-25 120.2 238 36.6
PSO063G1799 Papaver somniferum HOM05D001925 ORTHO05D004257 2.2e-25 120.2 281 33.5
C04p06870 Brassica napus HOM05D001925 ORTHO05D004257 2.4e-24 116.7 69 87.0
BolC4t22309H Brassica oleracea HOM05D001925 ORTHO05D004257 2.4e-24 116.7 69 87.0
Rhsim07G0013800 Rhododendron simsii HOM05D001925 ORTHO05D004257 3.1e-24 116.3 275 32.4
ECA236G3632 Erigeron canadensis HOM05D001925 ORTHO05D004257 9.1e-24 114.8 289 33.6
Hund27265 Selenicereus undatus HOM05D001925 ORTHO05D004257 9.1e-24 114.8 264 33.3
Eucgr.E00120 Eucalyptus grandis HOM05D001925 ORTHO05D004257 1.2e-23 114.4 262 34.4
A05p05940 Brassica napus HOM05D001925 ORTHO05D004257 2.7e-23 113.2 65 87.7
BraA05t19557Z Brassica rapa HOM05D001925 ORTHO05D004257 2.7e-23 113.2 65 87.7
PGSC0003DMG400006504 Solanum tuberosum HOM05D001925 ORTHO05D004257 3.5e-23 112.8 261 31.0
SalBow3G4075 Salvia bowleyana HOM05D001925 ORTHO05D004257 8.5e-22 108.2 284 32.0
ATR0680G064 Amborella trichopoda HOM05D001925 ORTHO05D004257 7.2e-21 105.1 305 28.9
EL10Ac1g00401 Beta vulgaris HOM05D001925 ORTHO05D004257 7.2e-21 105.1 235 31.9
arahy.Tifrunner.gnm1.ann1.2X3TQS Arachis hypogaea HOM05D001925 ORTHO05D004257 3.6e-20 102.8 303 32.0
Lj6A572T61 Lonicera japonica HOM05D001925 ORTHO05D004257 4.7e-20 102.4 172 36.6
HPP92_014720 Vanilla planifolia HOM05D001925 ORTHO05D004257 8.0e-20 101.7 284 29.6
DCAR_007445 Daucus carota HOM05D001925 ORTHO05D004257 1.0e-19 101.3 274 33.2
Lsat_1_v5_gn_7_4301 Lactuca sativa HOM05D001925 ORTHO05D004257 1.8e-19 100.5 284 31.0
Migut.B01767 Erythranthe guttata HOM05D001925 ORTHO05D004257 3.0e-19 99.8 284 30.3
Zm00001eb103050 Zea mays HOM05D001925 ORTHO05D004257 1.2e-18 97.8 215 32.6
AUR62004372 Chenopodium quinoa HOM05D001925 ORTHO05D004257 2.0e-18 97.1 260 31.2
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 5.7e-18 95.5 280 33.6
Zm00001eb318800 Zea mays HOM05D001925 ORTHO05D004257 4.8e-17 92.4 215 31.6
CDE08G0634 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 8.3e-17 91.7 125 36.0
Medtr2g027720 Medicago truncatula HOM05D001925 ORTHO05D004257 1.4e-16 90.9 227 33.0
CDE05G2831 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 3.1e-16 89.7 91 47.3
MBI17_g35262_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 4.1e-16 89.4 99 44.4
DCAR_025195 Daucus carota HOM05D001925 ORTHO05D004257 2.0e-15 87.0 293 25.6
unitig_8.g3798 Utricularia gibba HOM05D001925 ORTHO05D004257 2.7e-15 86.7 278 29.5
Zm00001eb305930 Zea mays HOM05D001925 ORTHO05D004257 4.5e-15 85.9 260 31.9
Os04g0165300 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 7.7e-15 85.1 236 30.9
MBI17_g42624_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 3.2e-13 79.7 145 39.3
HanXRQChr04g0121161 Helianthus annuus HOM05D001925 ORTHO05D004257 4.2e-13 79.3 225 27.1
Zm00001eb087910 Zea mays HOM05D001925 ORTHO05D004257 9.5e-13 78.2 208 31.2
Zm00001eb415260 Zea mays HOM05D001925 ORTHO05D004257 1.6e-12 77.4 208 31.2
SGA_v2.0_scaffold4G02300 Striga asiatica HOM05D001925 ORTHO05D004257 2.8e-12 76.6 245 31.4
BcaC02g12160 Brassica carinata HOM05D001925 ORTHO05D004257 6.1e-12 75.5 107 43.9
Os07g0418200 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 6.1e-12 75.5 232 30.6
Zm00001eb191080 Zea mays HOM05D001925 ORTHO05D004257 1.8e-11 73.9 250 27.6
SEGI_07880 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 5.2e-11 72.4 168 32.1
Os02g0821900 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 2.0e-10 70.5 271 25.5
Mapoly0022s0094 Marchantia polymorpha HOM05D001925 ORTHO05D004257 2.6e-10 70.1 73 45.2
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 8.3e-09 65.1 72 52.8
SGA_v2.0_scaffold95G28831 Striga asiatica HOM05D001925 ORTHO05D004257 1.1e-08 64.7 201 28.9
SMO112G0035 Selaginella moellendorffii HOM05D001925 ORTHO05D004257 3.1e-08 63.2 72 40.3
SMO364G0089 Selaginella moellendorffii HOM05D001925 ORTHO05D004257 5.4e-08 62.4 70 40.0
SEGI_37364 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 3.8e-06 56.2 235 22.6


User provided reference genes

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