Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p33560 Brassica napus HOM05D000078 ORTHO05D000025 2.1e-42 175.3 85 100.0
BolC4t28637H Brassica oleracea HOM05D000078 ORTHO05D000025 2.1e-42 175.3 85 100.0
BraA04t18818Z Brassica rapa HOM05D000078 ORTHO05D000025 2.1e-42 175.3 85 100.0
C04p71330 Brassica napus HOM05D000078 ORTHO05D000025 2.7e-42 174.9 84 100.0
BcaC02g07124 Brassica carinata HOM05D000078 ORTHO05D000025 2.3e-41 171.8 85 98.8
BcaB06g29408 Brassica carinata HOM05D000078 ORTHO05D000025 6.7e-25 117.1 96 67.7
BcaB01g03299 Brassica carinata HOM05D000078 ORTHO05D000025 4.3e-24 114.4 86 68.6
A03p24970 Brassica napus HOM05D000078 ORTHO05D000025 2.8e-23 111.7 86 66.3
Sp4g27020 Schrenkiella parvula HOM05D000078 ORTHO05D000025 1.4e-22 109.4 89 68.5
Thhalv10001792m.g Eutrema salsugineum HOM05D000078 ORTHO05D000025 5.8e-21 104.0 90 67.8
BcaB02g08962 Brassica carinata HOM05D000078 ORTHO05D000025 1.0e-20 103.2 85 68.2
BcaC01g05165 Brassica carinata HOM05D000078 ORTHO05D000025 1.0e-20 103.2 86 66.3
C03p29790 Brassica napus HOM05D000078 ORTHO05D000025 1.0e-20 103.2 86 66.3
BolC3t15326H Brassica oleracea HOM05D000078 ORTHO05D000025 1.0e-20 103.2 86 66.3
BcaC02g12258 Brassica carinata HOM05D000078 ORTHO05D000025 7.1e-19 97.1 89 64.0
A05p05060 Brassica napus HOM05D000078 ORTHO05D000025 7.1e-19 97.1 89 64.0
C04p05910 Brassica napus HOM05D000078 ORTHO05D000025 7.1e-19 97.1 89 64.0
BolC4t22222H Brassica oleracea HOM05D000078 ORTHO05D000025 7.1e-19 97.1 89 64.0
BraA05t19480Z Brassica rapa HOM05D000078 ORTHO05D000025 7.1e-19 97.1 89 64.0
BraA03t11700Z Brassica rapa HOM05D000078 ORTHO05D000025 1.2e-18 96.3 68 69.1
AL4G44050 Arabidopsis lyrata HOM05D000078 ORTHO05D000025 1.3e-15 86.3 59 71.2
CARHR140180 Cardamine hirsuta HOM05D000078 ORTHO05D000025 8.2e-15 83.6 92 56.5
AT2G44940 Arabidopsis thaliana HOM05D000078 ORTHO05D000025 1.4e-14 82.8 58 69.0
Carub.0004s2755 Capsella rubella HOM05D000078 ORTHO05D000025 1.5e-13 79.3 56 69.6
THA.LOC104817200 Tarenaya hassleriana HOM05D000078 ORTHO05D000025 1.9e-11 72.4 78 53.8
Aa31LG1G26540 Aethionema arabicum HOM05D000078 ORTHO05D000025 1.8e-09 65.9 55 65.5
AL5G42760 Arabidopsis lyrata HOM05D000078 ORTHO05D000025 1.8e-09 65.9 79 53.2
THA.LOC104802483 Tarenaya hassleriana HOM05D000078 ORTHO05D000025 3.9e-09 64.7 61 59.0
BcaC07g42777 Brassica carinata HOM05D000078 ORTHO05D000025 6.7e-09 63.9 66 57.6
A09p52740 Brassica napus HOM05D000078 ORTHO05D000025 6.7e-09 63.9 66 56.1
C08p35480 Brassica napus HOM05D000078 ORTHO05D000025 6.7e-09 63.9 66 57.6
BolC8t51139H Brassica oleracea HOM05D000078 ORTHO05D000025 6.7e-09 63.9 66 57.6
Sp5g02730 Schrenkiella parvula HOM05D000078 ORTHO05D000025 8.8e-09 63.5 73 53.4
BcaC07g42774 Brassica carinata HOM05D000078 ORTHO05D000025 1.5e-08 62.8 70 60.0
Aa31LG10G14750 Aethionema arabicum HOM05D000078 ORTHO05D000025 2.5e-08 62.0 61 57.4
BraA09t40704Z Brassica rapa HOM05D000078 ORTHO05D000025 2.5e-08 62.0 66 54.5
Carub.0005s2722 Capsella rubella HOM05D000078 ORTHO05D000025 2.5e-08 62.0 74 54.1
CARHR170870 Cardamine hirsuta HOM05D000078 ORTHO05D000025 3.3e-08 61.6 66 56.1
AT3G60490 Arabidopsis thaliana HOM05D000078 ORTHO05D000025 7.4e-08 60.5 80 50.0
Thhalv10006200m.g Eutrema salsugineum HOM05D000078 ORTHO05D000025 1.3e-07 59.7 66 59.1
BcaB02g07415 Brassica carinata HOM05D000078 ORTHO05D000025 2.4e-06 55.5 62 53.2
BraA07t30150Z Brassica rapa HOM05D000078 ORTHO05D000025 2.4e-06 55.5 60 53.3
Prupe.2G123200 Prunus persica HOM05D000078 ORTHO05D000025 2.4e-06 55.5 62 46.8
BcaC08g45064 Brassica carinata HOM05D000078 ORTHO05D000025 3.1e-06 55.1 60 53.3
QL04p034616 Quercus lobata HOM05D000078 ORTHO05D000025 6.9e-06 53.9 65 40.0


User provided reference genes

Program Settings