Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p33420 Brassica napus HOM05D005488 ORTHO05D006568 6.3e-82 307.4 154 100.0
BraA04t18803Z Brassica rapa HOM05D005488 ORTHO05D006568 5.7e-67 257.7 140 92.9
BcaC02g07105 Brassica carinata HOM05D005488 ORTHO05D006568 5.4e-65 251.1 140 90.0
BolC4t28620H Brassica oleracea HOM05D005488 ORTHO05D006568 1.6e-64 249.6 140 90.0
BcaB02g08840 Brassica carinata HOM05D005488 ORTHO05D006568 3.5e-64 248.4 140 89.3
BcaC02g12287 Brassica carinata HOM05D005488 ORTHO05D006568 4.5e-64 248.1 140 88.6
C04p05600 Brassica napus HOM05D005488 ORTHO05D006568 4.5e-64 248.1 140 88.6
BolC4t22190H Brassica oleracea HOM05D005488 ORTHO05D006568 4.5e-64 248.1 140 88.6
BraA05t19455Z Brassica rapa HOM05D005488 ORTHO05D006568 1.0e-63 246.9 140 87.9
Sp4g26730 Schrenkiella parvula HOM05D005488 ORTHO05D006568 5.0e-63 244.6 138 88.4
A05p04790 Brassica napus HOM05D005488 ORTHO05D006568 6.6e-63 244.2 140 86.4
C04p71170 Brassica napus HOM05D005488 ORTHO05D006568 1.1e-62 243.4 146 86.3
Thhalv10001677m.g Eutrema salsugineum HOM05D005488 ORTHO05D006568 2.3e-60 235.7 139 86.3
AL4G43700 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 1.3e-58 229.9 138 81.9
BcaB06g29391 Brassica carinata HOM05D005488 ORTHO05D006568 9.2e-57 223.8 129 85.3
Carub.0004s2720 Capsella rubella HOM05D005488 ORTHO05D006568 9.2e-57 223.8 138 80.4
CARHR139860 Cardamine hirsuta HOM05D005488 ORTHO05D006568 1.7e-55 219.5 145 77.2
AT2G44650 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 2.9e-55 218.8 140 77.1
Aa31LG1G26190 Aethionema arabicum HOM05D005488 ORTHO05D006568 3.3e-54 215.3 142 76.8
THA.LOC104827584 Tarenaya hassleriana HOM05D005488 ORTHO05D006568 2.0e-48 196.1 139 71.9
Carub.0005s2695 Capsella rubella HOM05D005488 ORTHO05D006568 5.0e-47 191.4 138 68.1
AL5G42420 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 2.1e-45 186.0 138 65.9
AT3G60210 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 1.2e-43 180.3 139 64.7
Cfa011024 Carpinus fangiana HOM05D005488 ORTHO05D006568 3.2e-41 172.2 138 63.8
Haze_02901 Corylus avellana HOM05D005488 ORTHO05D006568 6.0e-40 167.9 135 63.0
Prupe.2G116500 Prunus persica HOM05D005488 ORTHO05D006568 3.9e-39 165.2 139 61.9
Ciclev10022799m.g Citrus clementina HOM05D005488 ORTHO05D006568 6.6e-39 164.5 138 60.1
CiPaw.13G022100 Carya illinoinensis HOM05D005488 ORTHO05D006568 8.6e-39 164.1 138 61.6
Gohir.D08G161700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 8.6e-39 164.1 138 61.6
TWI23G0236 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 1.5e-38 163.3 142 59.2
CiPaw.14G016900 Carya illinoinensis HOM05D005488 ORTHO05D006568 1.9e-38 162.9 139 61.2
CANSAT25G0013 Cannabis sativa HOM05D005488 ORTHO05D006568 3.3e-38 162.2 139 63.3
Thecc.01G402400 Theobroma cacao HOM05D005488 ORTHO05D006568 3.3e-38 162.2 138 59.4
Atru.chr5.75 Acer truncatum HOM05D005488 ORTHO05D006568 5.6e-38 161.4 138 60.9
MELO3C006268.2 Cucumis melo HOM05D005488 ORTHO05D006568 5.6e-38 161.4 145 59.3
Nitab4.5_0004088g0020 Nicotiana tabacum HOM05D005488 ORTHO05D006568 7.3e-38 161.0 138 60.9
Solyc01g088610.4 Solanum lycopersicum HOM05D005488 ORTHO05D006568 7.3e-38 161.0 144 59.7
Sc26g0001760 Simmondsia chinensis HOM05D005488 ORTHO05D006568 9.5e-38 160.6 140 59.3
MD02G1223400 Malus domestica HOM05D005488 ORTHO05D006568 1.2e-37 160.2 138 61.6
Atru.chr5.44 Acer truncatum HOM05D005488 ORTHO05D006568 1.6e-37 159.8 138 60.1
COL.COLO4_12353 Corchorus olitorius HOM05D005488 ORTHO05D006568 1.6e-37 159.8 139 59.7
PGSC0003DMG400001718 Solanum tuberosum HOM05D005488 ORTHO05D006568 1.6e-37 159.8 138 60.9
TWI14G1396 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 1.6e-37 159.8 138 58.0
Nitab4.5_0005064g0040 Nicotiana tabacum HOM05D005488 ORTHO05D006568 2.1e-37 159.5 138 60.1
Sopen01g035460 Solanum pennellii HOM05D005488 ORTHO05D006568 2.1e-37 159.5 138 60.9
Oeu012019.1 Olea europaea HOM05D002442 ORTHO05D006568 2.8e-37 159.1 142 61.3
GSVIVG01018352001 Vitis vinifera HOM05D005488 ORTHO05D006568 3.6e-37 158.7 138 58.0
CSS0036750 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 4.7e-37 158.3 140 57.9
Duzib138G1174 Durio zibethinus HOM05D005488 ORTHO05D006568 4.7e-37 158.3 138 59.4
Manes.05G058400 Manihot esculenta HOM05D005488 ORTHO05D006568 4.7e-37 158.3 138 60.9
AUR62013788 Chenopodium quinoa HOM05D005488 ORTHO05D006568 8.1e-37 157.5 139 59.0
Gohir.A08G140700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 8.1e-37 157.5 138 60.1
Hund17125 Selenicereus undatus HOM05D005488 ORTHO05D006568 8.1e-37 157.5 143 55.9
Psat0s4427g0080 Pisum sativum HOM05D005488 ORTHO05D006568 1.1e-36 157.1 138 58.7
Gorai.004G168100 Gossypium raimondii HOM05D005488 ORTHO05D006568 1.4e-36 156.8 139 61.2
CsaV3_3G010440 Cucumis sativus L. HOM05D005488 ORTHO05D006568 1.8e-36 156.4 145 58.6
Potri.014G044300 Populus trichocarpa HOM05D005488 ORTHO05D006568 1.8e-36 156.4 140 59.3
CAN.G756.18 Capsicum annuum HOM05D005488 ORTHO05D006568 2.3e-36 156.0 138 59.4
EL10Ac1g00715 Beta vulgaris HOM05D005488 ORTHO05D006568 4.0e-36 155.2 141 59.6
Lj3g0015162 Lotus japonicus HOM05D005488 ORTHO05D006568 4.0e-36 155.2 140 59.3
RcHm_v2.0_Chr1g0344251 Rosa chinensis HOM05D005488 ORTHO05D006568 4.0e-36 155.2 139 61.9
MD07G1091300 Malus domestica HOM05D005488 ORTHO05D006568 8.9e-36 154.1 138 60.1
ClCG05G002900 Citrullus lanatus HOM05D005488 ORTHO05D006568 1.2e-35 153.7 144 59.0
Peaxi162Scf00745g00015 Petunia axillaris HOM05D005488 ORTHO05D006568 1.5e-35 153.3 142 60.6
AUR62023368 Chenopodium quinoa HOM05D005488 ORTHO05D006568 2.6e-35 152.5 139 56.8
Nn6g33696 Nelumbo nucifera HOM05D005488 ORTHO05D006568 3.4e-35 152.1 138 55.8
Lsat_1_v5_gn_4_38520 Lactuca sativa HOM05D005488 ORTHO05D006568 4.4e-35 151.8 141 56.7
Ca_23141_v3 Cicer arietinum L. HOM05D005488 ORTHO05D006568 7.6e-35 151.0 138 55.8
Eucgr.D01184 Eucalyptus grandis HOM05D005488 ORTHO05D006568 7.6e-35 151.0 138 55.8
FvH4_7g08830 Fragaria vesca HOM05D005488 ORTHO05D006568 7.6e-35 151.0 139 60.4
FAN06G3564 Fragaria x ananassa HOM05D005488 ORTHO05D006568 7.6e-35 151.0 139 60.4
Phvul.010G041700 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 7.6e-35 151.0 138 55.8
FAN10G0732 Fragaria x ananassa HOM05D005488 ORTHO05D006568 2.9e-34 149.1 139 59.0
PSO063G2958 Papaver somniferum HOM05D005488 ORTHO05D006568 4.9e-34 148.3 138 55.8
Aqoxy3G02564 Aquilegia oxysepala HOM05D005488 ORTHO05D006568 6.4e-34 147.9 142 54.9
arahy.Tifrunner.gnm1.ann1.L23YUH Arachis hypogaea HOM05D005488 ORTHO05D006568 6.4e-34 147.9 139 56.1
arahy.Tifrunner.gnm1.ann1.LT98XL Arachis hypogaea HOM05D005488 ORTHO05D006568 6.4e-34 147.9 139 56.1
FAN03G1834 Fragaria x ananassa HOM05D005488 ORTHO05D006568 6.4e-34 147.9 139 59.0
Glyma.03G103600 Glycine max HOM05D005488 ORTHO05D006568 6.4e-34 147.9 138 55.8
FAN01G0908 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.1e-33 147.1 139 57.6
Oeu034855.1 Olea europaea HOM05D005488 ORTHO05D006568 1.1e-33 147.1 138 55.8
PSO782G2409 Papaver somniferum HOM05D005488 ORTHO05D006568 1.1e-33 147.1 138 55.1
FAN10G4236 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.4e-33 146.7 139 58.3
Actinidia21613 Actinidia chinensis HOM05D005488 ORTHO05D006568 3.2e-33 145.6 141 55.3
Sed0025787 Sechium edule HOM05D005488 ORTHO05D006568 5.4e-33 144.8 145 53.1
ATR0665G403 Amborella trichopoda HOM05D005488 ORTHO05D006568 9.2e-33 144.1 140 55.7
Migut.N01716 Erythranthe guttata HOM05D005488 ORTHO05D006568 1.2e-32 143.7 143 56.6
MSTRG.17108 Avicennia marina HOM05D005488 ORTHO05D006568 2.7e-32 142.5 152 53.3
SalBow5G2779 Salvia bowleyana HOM05D005488 ORTHO05D006568 2.7e-32 142.5 142 55.6
Cc02_g25610 Coffea canephora HOM05D005488 ORTHO05D006568 3.5e-32 142.1 140 56.4
Cpa.g.sc52.71 Carica papaya HOM05D005488 ORTHO05D006568 6.0e-32 141.4 119 62.2
Lalb_Chr19g0126481 Lupinus albus HOM05D005488 ORTHO05D006568 7.8e-32 141.0 141 53.9
PGR042G2970 Punica granatum HOM05D005488 ORTHO05D006568 7.8e-32 141.0 139 54.0
SGA_v2.0_scaffold52G19266 Striga asiatica HOM05D005488 ORTHO05D006568 7.8e-32 141.0 138 55.1
Medtr8g009280 Medicago truncatula HOM05D005488 ORTHO05D006568 1.0e-31 140.6 138 53.6
HanXRQChr16g0522961 Helianthus annuus HOM05D005488 ORTHO05D006568 1.3e-31 140.2 144 54.9
VMungo0331G0633 Vigna mungo HOM05D005488 ORTHO05D006568 1.7e-31 139.8 130 55.4
CSS0010758 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 2.3e-31 139.4 138 53.6
DCAR_025027 Daucus carota HOM05D005488 ORTHO05D006568 1.1e-30 137.1 138 52.9
Lalb_Chr03g0040501 Lupinus albus HOM05D005488 ORTHO05D006568 1.5e-30 136.7 141 51.8
ClCG06G000860 Citrullus lanatus HOM05D005488 ORTHO05D006568 2.5e-30 136.0 138 52.9
Sed0000336 Sechium edule HOM05D005488 ORTHO05D006568 2.5e-30 136.0 140 52.9
Migut.B01488 Erythranthe guttata HOM05D005488 ORTHO05D006568 4.3e-30 135.2 139 53.2
vmacro21078 Vaccinium macrocarpon HOM05D005488 ORTHO05D006568 4.3e-30 135.2 170 46.5
ECA234G4156 Erigeron canadensis HOM05D005488 ORTHO05D006568 5.6e-30 134.8 145 53.1
unitig_26.g8858 Utricularia gibba HOM05D005488 ORTHO05D006568 5.6e-30 134.8 138 50.0
CSS0012976 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 2.1e-29 132.9 140 52.9
TPR.G17350 Trifolium pratense HOM05D005488 ORTHO05D006568 8.1e-29 131.0 107 61.7
CDE12G0168 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 2.6e-27 125.9 143 47.6
MELO3C022455.2 Cucumis melo HOM05D005488 ORTHO05D006568 2.6e-27 125.9 157 48.4
CDE04G3246 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 7.6e-27 124.4 143 48.3
Rhsim01G0143400 Rhododendron simsii HOM05D005488 ORTHO05D006568 7.6e-27 124.4 126 55.6
Os10g0566700 Oryza sativa ssp. japonica HOM05D005488 ORTHO05D006568 6.4e-26 121.3 102 56.9
CsaV3_6G006710 Cucumis sativus L. HOM05D005488 ORTHO05D001261 8.4e-26 120.9 128 50.8
Duzib133G1397 Durio zibethinus HOM05D005488 ORTHO05D006568 8.4e-26 120.9 106 63.2
Sabra02G0105500 Salix brachista HOM05D005488 ORTHO05D006568 1.4e-25 120.2 210 39.0
Zm00001eb024030 Zea mays HOM05D005488 ORTHO05D006568 7.1e-25 117.9 145 49.7
Zm00001eb390720 Zea mays HOM05D005488 ORTHO05D006568 9.3e-25 117.5 108 55.6
Potri.002G135700 Populus trichocarpa HOM05D005488 ORTHO05D006568 2.1e-24 116.3 121 50.4
unitig_750.g28406 Utricularia gibba HOM05D005488 ORTHO05D006568 4.6e-24 115.2 138 44.9
Dinv44023 Davidia involucrata HOM05D005488 ORTHO05D006568 6.0e-24 114.8 91 64.8
SEGI_24977 Sequoiadendron giganteum HOM05D005488 ORTHO05D006568 6.0e-24 114.8 121 52.9
Dinv43589 Davidia involucrata HOM05D005488 ORTHO05D006568 4.3e-22 108.6 89 61.8
AagrBONN_evm.TU.Sc2ySwM_117.3656 Anthoceros agrestis HOM05D005488 ORTHO05D006568 2.1e-21 106.3 107 50.5
HPP92_025708 Vanilla planifolia HOM05D005488 ORTHO05D006568 2.1e-21 106.3 90 58.9
Mapoly0181s0002 Marchantia polymorpha HOM05D005488 ORTHO05D006568 1.4e-20 103.6 91 57.1
SMO244G0054 Selaginella moellendorffii HOM05D005488 ORTHO05D006568 2.4e-20 102.8 90 57.8
Pp3c2_19170 Physcomitrium patens HOM05D005488 ORTHO05D006568 5.3e-20 101.7 141 42.6
Glyma.07G120400 Glycine max HOM05D005488 ORTHO05D006568 3.4e-19 99.0 88 59.1
Sabra14G0032200 Salix brachista HOM05D005488 ORTHO05D006568 7.6e-19 97.8 145 43.4
Pp3c1_20880 Physcomitrium patens HOM05D005488 ORTHO05D006568 3.2e-17 92.4 90 48.9
QL04p026246 Quercus lobata HOM05D005488 ORTHO05D006568 4.2e-17 92.0 70 62.9
MD13G1240800 Malus domestica HOM05D005488 ORTHO05D006568 5.4e-17 91.7 88 58.0
Phvul.006G055900 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 4.6e-16 88.6 88 53.4
Zm00001eb071630 Zea mays HOM05D005488 ORTHO05D006568 3.0e-15 85.9 145 42.1
Gohir.D07G176200 Gossypium hirsutum HOM05D005488 ORTHO05D006568 8.1e-13 77.8 75 56.0
QL04p026254 Quercus lobata HOM05D005488 ORTHO05D006568 2.0e-11 73.2 71 57.7
Gorai.007G266500 Gossypium raimondii HOM05D005488 ORTHO05D006568 1.3e-10 70.5 66 57.6
Rhsim03G0098500 Rhododendron simsii HOM05D005488 ORTHO05D006568 3.5e-08 62.4 40 75.0
SGA_v2.0_scaffold296G47568 Striga asiatica HOM05D002686 ORTHO05D003222 6.0e-08 61.6 136 32.4
EL10Ac8g19011 Beta vulgaris HOM05D002686 ORTHO05D003222 1.5e-06 57.0 97 33.0
Cre16.g673729 Chlamydomonas reinhardtii HOM05D002686 ORTHO05D006568 1.9e-06 56.6 110 35.5
Ah.14g084810 Amaranthus hybridus HOM05D002686 ORTHO05D003222 3.3e-06 55.8 105 36.2
SGA_v2.0_scaffold31G12679 Striga asiatica HOM05D002686 ORTHO05D003222 3.3e-06 55.8 129 31.0
AUR62025283 Chenopodium quinoa HOM05D002686 ORTHO05D003222 5.6e-06 55.1 105 33.3
AUR62028287 Chenopodium quinoa HOM05D002686 ORTHO05D003222 5.6e-06 55.1 105 33.3
SEGI_38857 Sequoiadendron giganteum HOM05D002686 ORTHO05D003222 7.4e-06 54.7 116 33.6
PRCOL_00004840 Prasinoderma coloniale HOM05D002686 ORTHO05D003222 9.6e-06 54.3 107 32.7
Hund08835 Selenicereus undatus HOM05D002686 ORTHO05D003222 9.6e-06 54.3 97 33.0


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