Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 2.3e-53 211.8 98 100.0
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 2.3e-53 211.8 98 100.0
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 1.6e-46 189.1 98 91.8
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 6.1e-22 107.5 91 60.4
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 2.0e-20 102.4 91 58.2
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-14 83.2 91 48.4
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 1.4e-13 79.7 88 48.9
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 1.4e-13 79.7 88 48.9
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 2.3e-13 79.0 91 49.5
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 2.3e-13 79.0 91 50.5
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 2.3e-13 79.0 91 50.5
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 2.3e-13 79.0 91 50.5
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 4.0e-13 78.2 88 47.7
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 4.0e-13 78.2 92 47.8
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 6.8e-13 77.4 90 52.2
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 6.8e-13 77.4 91 48.4
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 8.8e-13 77.0 94 50.0
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-12 76.6 91 48.4
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.0e-12 75.9 88 52.3
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 2.6e-12 75.5 89 53.9
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 2.6e-12 75.5 89 53.9
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 3.4e-12 75.1 91 50.5
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 4.4e-12 74.7 89 53.9
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 9.8e-12 73.6 88 47.7
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 9.8e-12 73.6 90 48.9
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 1.3e-11 73.2 90 48.9
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 1.3e-11 73.2 90 48.9
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.7e-11 72.8 91 49.5
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.7e-11 72.8 93 48.4
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.7e-11 72.8 91 49.5
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 1.7e-11 72.8 90 47.8
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 1.7e-11 72.8 92 48.9
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 2.8e-11 72.0 89 51.7
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.8e-11 72.0 89 47.2
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 3.7e-11 71.6 93 47.3
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 4.8e-11 71.2 89 50.6
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 4.8e-11 71.2 89 50.6
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.1e-10 70.1 92 47.8
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 1.1e-10 70.1 93 46.2
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 1.4e-10 69.7 90 47.8
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 1.4e-10 69.7 93 45.2
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 1.4e-10 69.7 93 45.2
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 1.4e-10 69.7 90 47.8
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 2.4e-10 68.9 94 50.0
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.4e-10 68.9 91 48.4
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 3.1e-10 68.6 90 46.7
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 3.1e-10 68.6 90 46.7
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 3.1e-10 68.6 90 46.7
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 4.1e-10 68.2 94 45.7
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 4.1e-10 68.2 93 45.2
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.6e-09 66.2 90 44.4
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.0e-09 65.9 90 45.6
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.0e-09 65.9 89 46.1
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 2.0e-09 65.9 72 48.6
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.7e-09 65.5 92 45.7
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.7e-09 65.5 101 43.6
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 2.7e-09 65.5 92 44.6
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 7.7e-09 63.9 92 43.5
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 1.0e-08 63.5 89 44.9
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 1.7e-08 62.8 90 45.6
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 2.9e-08 62.0 87 44.8
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 6.5e-08 60.8 88 43.2
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 4.2e-07 58.2 90 44.4
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 7.2e-07 57.4 89 40.4
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.2e-06 56.6 70 45.7
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 2.7e-06 55.5 87 39.1
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 2.7e-06 55.5 87 39.1
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 2.7e-06 55.5 87 40.2
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 2.7e-06 55.5 94 38.3
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 3.6e-06 55.1 66 48.5
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 4.7e-06 54.7 66 48.5


User provided reference genes

Program Settings