Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p30110 Brassica napus HOM05D001930 ORTHO05D001345 4.1e-75 285.0 190 100.0
BcaB06g29123 Brassica carinata HOM05D001930 ORTHO05D001345 1.7e-28 130.2 171 70.2
Sp4g22360 Schrenkiella parvula HOM05D001930 ORTHO05D001345 7.9e-26 121.3 175 49.7
BcaB02g09056 Brassica carinata HOM05D001930 ORTHO05D001345 1.3e-23 114.0 179 46.9
Thhalv10016404m.g Eutrema salsugineum HOM05D001930 ORTHO05D001345 1.1e-22 110.9 139 49.6
AL4G37690 Arabidopsis lyrata HOM05D001930 ORTHO05D001345 3.4e-21 105.9 177 44.1
Carub.0004s2221 Capsella rubella HOM05D001930 ORTHO05D001345 1.7e-20 103.6 177 42.9
CARHR135010 Cardamine hirsuta HOM05D001930 ORTHO05D001345 3.8e-20 102.4 175 50.3
AT2G40070 Arabidopsis thaliana HOM05D001930 ORTHO05D001345 3.2e-19 99.4 178 43.8
BolC4t22362H Brassica oleracea HOM05D001930 ORTHO05D001345 3.2e-19 99.4 185 51.9
Aa31LG5G19550 Aethionema arabicum HOM05D001930 ORTHO05D001345 2.1e-18 96.7 75 69.3
THA.LOC104810417 Tarenaya hassleriana HOM05D001930 ORTHO05D001345 5.1e-17 92.0 173 39.9
A05p06400 Brassica napus HOM05D001930 ORTHO05D001345 5.7e-16 88.6 69 73.9
BraA05t19608Z Brassica rapa HOM05D001930 ORTHO05D001345 5.7e-16 88.6 69 73.9
THA.LOC104810086 Tarenaya hassleriana HOM05D001930 ORTHO05D001345 4.8e-15 85.5 75 62.7
C04p07410 Brassica napus HOM05D001930 ORTHO05D001345 6.9e-14 81.6 185 48.6
Cpa.g.sc19.190 Carica papaya HOM05D001930 ORTHO05D001345 2.0e-13 80.1 75 56.0
Rhsim03G0142000 Rhododendron simsii HOM05D001930 ORTHO05D001345 2.6e-13 79.7 75 56.0
CANSAT56G0325 Cannabis sativa HOM05D001930 ORTHO05D001345 5.9e-13 78.6 78 56.4
Dinv17980 Davidia involucrata HOM05D001930 ORTHO05D001345 1.0e-12 77.8 75 54.7
COL.COLO4_25689 Corchorus olitorius HOM05D001930 ORTHO05D001345 1.7e-12 77.0 78 53.8
ClCG11G006220 Citrullus lanatus HOM05D001930 ORTHO05D001345 2.2e-12 76.6 77 57.1
MELO3C008291.2 Cucumis melo HOM05D001930 ORTHO05D001345 2.2e-12 76.6 77 57.1
Hma1.2p1_0446F.1_g154590 Hydrangea macrophylla HOM05D001930 ORTHO05D001345 2.9e-12 76.3 73 57.5
Sed0016379 Sechium edule HOM05D001930 ORTHO05D001345 2.9e-12 76.3 77 55.8
TAR369G0785 Trochodendron aralioides HOM05D001930 ORTHO05D001345 5.0e-12 75.5 75 54.7
CSS0031125 Camellia sinensis var. sinensis HOM05D001930 ORTHO05D001345 6.5e-12 75.1 73 54.8
CsaV3_6G001770 Cucumis sativus L. HOM05D001930 ORTHO05D001345 6.5e-12 75.1 76 56.6
Gohir.D10G247300 Gossypium hirsutum HOM05D001930 ORTHO05D001345 6.5e-12 75.1 77 54.5
Gorai.011G285700 Gossypium raimondii HOM05D001930 ORTHO05D001345 6.5e-12 75.1 77 54.5
RcHm_v2.0_Chr1g0369981 Rosa chinensis HOM05D001930 ORTHO05D001345 6.5e-12 75.1 75 57.3
CANSAT56G4542 Cannabis sativa HOM05D001930 ORTHO05D001345 8.5e-12 74.7 77 55.8
Eucgr.G03055 Eucalyptus grandis HOM05D001930 ORTHO05D001345 8.5e-12 74.7 75 54.7
Hma1.2p1_0281F.1_g113000 Hydrangea macrophylla HOM05D001930 ORTHO05D001345 1.1e-11 74.3 138 38.4
MD01G1132400 Malus domestica HOM05D001930 ORTHO05D001345 1.1e-11 74.3 77 55.8
MD07G1220200 Malus domestica HOM05D001930 ORTHO05D001345 1.1e-11 74.3 75 57.3
Nitab4.5_0000802g0030 Nicotiana tabacum HOM05D001930 ORTHO05D001345 1.1e-11 74.3 139 38.1
Ah.16g103400 Amaranthus hybridus HOM05D001930 ORTHO05D001345 1.4e-11 73.9 75 52.0
Aqoxy2G00919 Aquilegia oxysepala HOM05D001930 ORTHO05D001345 1.9e-11 73.6 75 53.3
Lj8C68G6 Lonicera japonica HOM05D001930 ORTHO05D001345 2.5e-11 73.2 75 54.7
Medtr3g070300 Medicago truncatula HOM05D001930 ORTHO05D001345 2.5e-11 73.2 140 39.3
Glyma.11G228400 Glycine max HOM05D001930 ORTHO05D001345 3.2e-11 72.8 113 45.1
SGA_v2.0_scaffold44G16687 Striga asiatica HOM05D001930 ORTHO05D001345 3.2e-11 72.8 72 56.9
C03p26660 Brassica napus HOM05D001930 ORTHO05D001345 4.2e-11 72.4 150 43.3
Ca_15267_v3 Cicer arietinum L. HOM05D001930 ORTHO05D001345 4.2e-11 72.4 140 38.6
Ciclev10030993m.g Citrus clementina HOM05D001930 ORTHO05D001345 4.2e-11 72.4 77 57.1
Manes.10G014000 Manihot esculenta HOM05D001930 ORTHO05D001345 5.5e-11 72.0 74 56.8
Gorai.012G076400 Gossypium raimondii HOM05D001930 ORTHO05D001345 7.2e-11 71.6 78 50.0
Nn2g11456 Nelumbo nucifera HOM05D001930 ORTHO05D001345 7.2e-11 71.6 76 53.9
BcaB01g03592 Brassica carinata HOM05D001930 ORTHO05D001345 9.4e-11 71.2 111 42.3
Cfa001331 Carpinus fangiana HOM05D001930 ORTHO05D001345 9.4e-11 71.2 79 51.9
AUR62022866 Chenopodium quinoa HOM05D001930 ORTHO05D001345 9.4e-11 71.2 76 52.6
Duzib114G0676 Durio zibethinus HOM05D001930 ORTHO05D001345 9.4e-11 71.2 78 50.0
Glyma.18G028700 Glycine max HOM05D001930 ORTHO05D001345 9.4e-11 71.2 113 44.2
Gohir.A10G234900 Gossypium hirsutum HOM05D001930 ORTHO05D001345 9.4e-11 71.2 77 53.2
Lj1A953G44 Lonicera japonica HOM05D001930 ORTHO05D001345 1.2e-10 70.9 75 50.7
Lj6g0015169 Lotus japonicus HOM05D001930 ORTHO05D001345 1.2e-10 70.9 115 43.5
LjContig00142g0017848 Lotus japonicus HOM05D001930 ORTHO05D001345 1.2e-10 70.9 115 43.5
Psat5g126440 Pisum sativum HOM05D001930 ORTHO05D001345 1.2e-10 70.9 140 38.6
DCAR_028566 Daucus carota HOM05D001930 ORTHO05D001345 2.1e-10 70.1 77 54.5
Nn2g13688 Nelumbo nucifera HOM05D001930 ORTHO05D001345 2.1e-10 70.1 76 53.9
Thecc.10G020700 Theobroma cacao HOM05D001930 ORTHO05D001345 2.1e-10 70.1 78 50.0
A03p22510 Brassica napus HOM05D001930 ORTHO05D001345 2.7e-10 69.7 112 42.9
BraA03t11477Z Brassica rapa HOM05D001930 ORTHO05D001345 2.7e-10 69.7 112 42.9
FvH4_7g24320 Fragaria vesca HOM05D001930 ORTHO05D001345 2.7e-10 69.7 76 52.6
FAN01G1543 Fragaria x ananassa HOM05D001930 ORTHO05D001345 2.7e-10 69.7 76 52.6
FAN10G2989 Fragaria x ananassa HOM05D001930 ORTHO05D001345 2.7e-10 69.7 76 52.6
Glyma.14G060100 Glycine max HOM05D001930 ORTHO05D001345 2.7e-10 69.7 140 35.7
arahy.Tifrunner.gnm1.ann1.1VS4ZL Arachis hypogaea HOM05D001930 ORTHO05D001345 3.6e-10 69.3 79 53.2
arahy.Tifrunner.gnm1.ann1.P8UNKF Arachis hypogaea HOM05D001930 ORTHO05D001345 3.6e-10 69.3 79 53.2
Glyma.02G256600 Glycine max HOM05D001930 ORTHO05D001345 3.6e-10 69.3 140 36.4
EL10Ac2g04813 Beta vulgaris HOM05D001930 ORTHO05D001345 4.7e-10 68.9 76 50.0
CiPaw.01G297400 Carya illinoinensis HOM05D001930 ORTHO05D001345 4.7e-10 68.9 76 55.3
PGR142G0208 Punica granatum HOM05D001930 ORTHO05D001345 4.7e-10 68.9 75 50.7
Gohir.D04G067400 Gossypium hirsutum HOM05D001930 ORTHO05D001345 6.1e-10 68.6 78 48.7
Oeu048249.1 Olea europaea HOM05D001930 ORTHO05D001345 6.1e-10 68.6 83 50.6
AUR62012234 Chenopodium quinoa HOM05D001930 ORTHO05D001345 7.9e-10 68.2 76 51.3
GSVIVG01032844001 Vitis vinifera HOM05D001930 ORTHO05D001345 7.9e-10 68.2 76 52.6
Ah.10g036510 Amaranthus hybridus HOM05D001930 ORTHO05D001345 1.0e-09 67.8 76 50.0
Lsat_1_v5_gn_8_12340 Lactuca sativa HOM05D001930 ORTHO05D001345 1.0e-09 67.8 72 51.4
VMungo0647G2500 Vigna mungo HOM05D001930 ORTHO05D001345 1.0e-09 67.8 140 36.4
arahy.Tifrunner.gnm1.ann1.G8RZTB Arachis hypogaea HOM05D001930 ORTHO05D001345 1.4e-09 67.4 77 53.2
arahy.Tifrunner.gnm1.ann1.I8BS46 Arachis hypogaea HOM05D001930 ORTHO05D001345 1.4e-09 67.4 77 53.2
Duzib128G0280 Durio zibethinus HOM05D001930 ORTHO05D001345 1.4e-09 67.4 78 47.4
TPR.G2544 Trifolium pratense HOM05D001930 ORTHO05D001345 1.4e-09 67.4 76 51.3
VMungo1383G0091 Vigna mungo HOM05D001930 ORTHO05D001345 1.4e-09 67.4 113 42.5
Actinidia13930 Actinidia chinensis HOM05D001930 ORTHO05D001345 1.8e-09 67.0 73 50.7
ATR0618G241 Amborella trichopoda HOM05D001930 ORTHO05D001345 1.8e-09 67.0 75 46.7
BcaC01g05440 Brassica carinata HOM05D001930 ORTHO05D001345 2.3e-09 66.6 112 42.0
BolC3t15051H Brassica oleracea HOM05D001930 ORTHO05D001345 2.3e-09 66.6 112 42.0
FAN03G2510 Fragaria x ananassa HOM05D001930 ORTHO05D001345 2.3e-09 66.6 76 51.3
DCAR_024834 Daucus carota HOM05D001930 ORTHO05D001345 3.0e-09 66.2 77 49.4
Lsat_1_v5_gn_2_122761 Lactuca sativa HOM05D001930 ORTHO05D001345 3.9e-09 65.9 76 52.6
HanXRQChr08g0222141 Helianthus annuus HOM05D001930 ORTHO05D001345 6.7e-09 65.1 66 53.0
Atru.chr12.18 Acer truncatum HOM05D001930 ORTHO05D001345 8.8e-09 64.7 80 51.2
MBI05_g34494_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 8.8e-09 64.7 76 48.7
PSO339G3119 Papaver somniferum HOM05D001930 ORTHO05D001345 8.8e-09 64.7 76 48.7
Phvul.001G241800 Phaseolus vulgaris HOM05D001930 ORTHO05D001345 8.8e-09 64.7 113 41.6
Phvul.008G224800 Phaseolus vulgaris HOM05D001930 ORTHO05D001345 8.8e-09 64.7 140 35.0
Lalb_Chr15g0084191 Lupinus albus HOM05D001930 ORTHO05D001345 1.1e-08 64.3 76 51.3
SGA_v2.0_scaffold60G20991 Striga asiatica HOM05D001930 ORTHO05D001345 1.1e-08 64.3 73 53.4
Duzib106G1667 Durio zibethinus HOM05D001930 ORTHO05D001345 1.5e-08 63.9 78 46.2
Nitab4.5_0003138g0040 Nicotiana tabacum HOM05D001930 ORTHO05D001345 1.5e-08 63.9 70 50.0
Nitab4.5_0008493g0010 Nicotiana tabacum HOM05D001930 ORTHO05D001345 1.5e-08 63.9 151 34.4
Actinidia00941 Actinidia chinensis HOM05D001930 ORTHO05D001345 2.0e-08 63.5 73 47.9
Nitab4.5_0002100g0020 Nicotiana tabacum HOM05D001930 ORTHO05D001345 2.0e-08 63.5 76 52.6
MSTRG.27324 Avicennia marina HOM05D001930 ORTHO05D001345 2.6e-08 63.2 73 53.4
Lalb_Chr10g0105111 Lupinus albus HOM05D001930 ORTHO05D001345 2.6e-08 63.2 76 51.3
SalBow6G0604 Salvia bowleyana HOM05D001930 ORTHO05D001345 9.7e-08 61.2 75 52.0
Hund13841 Selenicereus undatus HOM05D001930 ORTHO05D001345 1.3e-07 60.8 76 46.1
Solyc05g052715.1 Solanum lycopersicum HOM05D001930 ORTHO05D001345 1.3e-07 60.8 74 52.7
ECA238G2369 Erigeron canadensis HOM05D001930 ORTHO05D001345 1.7e-07 60.5 77 53.2
PSO801G0843 Papaver somniferum HOM05D001930 ORTHO05D001345 1.7e-07 60.5 74 47.3
SHI03472 Sapria himalayana HOM05D001930 ORTHO05D001345 1.7e-07 60.5 109 36.7
Lalb_Chr18g0052641 Lupinus albus HOM05D001930 ORTHO05D001345 2.2e-07 60.1 72 45.8
MBI14_g28262_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 2.2e-07 60.1 76 48.7
unitig_46.g18737 Utricularia gibba HOM05D001930 ORTHO05D001345 2.2e-07 60.1 74 45.9
Migut.F00675 Erythranthe guttata HOM05D001930 ORTHO05D001345 2.8e-07 59.7 75 49.3
HanXRQChr12g0370531 Helianthus annuus HOM05D001930 ORTHO05D001345 3.7e-07 59.3 71 49.3
Lalb_Chr17g0346731 Lupinus albus HOM05D001930 ORTHO05D001345 3.7e-07 59.3 73 52.1
Oeu025644.2 Olea europaea HOM05D001930 ORTHO05D001345 8.2e-07 58.2 75 48.0
BcaC02g07348 Brassica carinata HOM05D001930 ORTHO05D001345 1.1e-06 57.8 32 87.5
MSTRG.8950 Avicennia marina HOM05D001930 ORTHO05D001345 1.8e-06 57.0 75 50.7
HanXRQChr14g0459861 Helianthus annuus HOM05D001930 ORTHO05D001345 1.8e-06 57.0 74 50.0
BcaB06g29126 Brassica carinata HOM05D001930 ORTHO05D001345 3.1e-06 56.2 58 53.4
DCAR_011804 Daucus carota HOM05D001930 ORTHO05D001345 3.1e-06 56.2 75 45.3
Oeu064385.2 Olea europaea HOM05D001930 ORTHO05D001345 3.1e-06 56.2 75 49.3
Hund13843 Selenicereus undatus HOM05D001930 ORTHO05D001345 3.1e-06 56.2 80 45.0
MBI03_g07299_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 7.0e-06 55.1 75 44.0
Potri.008G066900 Populus trichocarpa HOM05D001930 ORTHO05D001345 7.0e-06 55.1 58 50.0
CAN.G301.5 Capsicum annuum HOM05D001930 ORTHO05D001345 9.1e-06 54.7 71 49.3
Peaxi162Scf01208g00017 Petunia axillaris HOM05D001930 ORTHO05D001345 9.1e-06 54.7 71 47.9


User provided reference genes

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