Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 3.0e-143 511.9 274 100.0
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 5.1e-143 511.1 274 99.6
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 8.7e-143 510.4 274 99.6
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 9.6e-142 506.9 274 98.9
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 9.6e-142 506.9 274 98.9
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 7.9e-136 487.3 274 95.6
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 2.5e-134 482.3 274 94.5
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 6.3e-133 477.6 274 93.1
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 8.2e-133 477.2 274 92.7
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 1.1e-132 476.9 274 93.1
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 2.4e-132 475.7 273 93.8
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 4.1e-132 474.9 271 93.0
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 4.1e-132 474.9 271 93.0
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 7.7e-131 470.7 273 93.8
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 8.5e-130 467.2 273 91.6
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 3.2e-129 465.3 273 91.2
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 3.6e-128 461.8 274 89.4
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 1.2e-123 446.8 252 95.6
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 1.1e-118 430.3 260 84.6
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 1.5e-118 429.9 273 82.1
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 4.4e-118 428.3 262 85.5
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 4.4e-118 428.3 273 81.7
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 3.7e-117 425.2 273 81.0
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 6.3e-117 424.5 259 84.6
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.1e-116 423.7 251 88.8
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 1.8e-116 422.9 260 83.8
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.4e-116 422.5 273 82.8
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 3.1e-116 422.2 262 83.2
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 5.3e-116 421.4 259 84.6
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 5.3e-116 421.4 262 83.6
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 7.0e-116 421.0 260 83.1
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 1.6e-115 419.9 259 84.2
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 1.6e-115 419.9 258 84.5
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 1.6e-115 419.9 286 78.3
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 2.6e-115 419.1 260 83.1
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 2.6e-115 419.1 260 83.8
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 3.5e-115 418.7 260 82.3
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 7.7e-115 417.5 260 82.7
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 7.7e-115 417.5 259 83.4
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 7.7e-115 417.5 260 83.1
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 1.0e-114 417.2 259 82.2
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 1.0e-114 417.2 260 84.6
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 2.2e-114 416.0 259 83.8
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.9e-114 415.6 259 83.0
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 2.9e-114 415.6 260 83.1
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.8e-114 415.2 259 83.4
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 8.5e-114 414.1 260 83.1
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 8.5e-114 414.1 260 82.7
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 8.5e-114 414.1 260 83.1
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 8.5e-114 414.1 259 83.4
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 1.1e-113 413.7 260 83.1
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.5e-113 413.3 273 78.0
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.5e-113 413.3 259 82.6
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 1.5e-113 413.3 260 81.9
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 1.5e-113 413.3 267 81.3
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.5e-113 412.5 259 82.2
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 3.2e-113 412.1 259 82.2
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 4.2e-113 411.8 260 82.3
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 4.2e-113 411.8 271 78.2
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 5.5e-113 411.4 259 82.6
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 7.2e-113 411.0 271 79.3
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 9.4e-113 410.6 260 81.9
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.6e-112 409.8 260 81.5
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 1.6e-112 409.8 275 77.8
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.6e-112 409.8 273 79.5
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 4.7e-112 408.3 273 78.0
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 6.1e-112 407.9 253 83.8
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 6.1e-112 407.9 274 78.8
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 8.0e-112 407.5 258 82.2
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 1.0e-111 407.1 253 83.4
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 1.4e-111 406.8 260 79.6
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 2.3e-111 406.0 260 80.8
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 2.3e-111 406.0 271 78.2
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 2.3e-111 406.0 251 84.1
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 4.0e-111 405.2 261 80.8
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 4.0e-111 405.2 260 79.2
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 5.2e-111 404.8 260 79.6
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 8.8e-111 404.1 259 80.7
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 1.5e-110 403.3 258 79.8
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 2.6e-110 402.5 273 76.6
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 2.6e-110 402.5 259 80.3
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 5.7e-110 401.4 259 80.3
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 7.5e-110 401.0 259 79.9
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 1.3e-109 400.2 255 80.4
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 2.8e-109 399.1 258 79.5
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 3.7e-109 398.7 250 82.4
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 1.1e-108 397.1 262 79.0
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 1.1e-108 397.1 239 85.4
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 1.1e-108 397.1 262 79.8
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 1.8e-108 396.4 276 74.3
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 2.0e-107 392.9 252 81.3
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 2.2e-106 389.4 260 77.3
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 6.5e-106 387.9 260 76.9
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 1.1e-105 387.1 260 76.9
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 7.2e-105 384.4 258 74.8
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 7.2e-105 384.4 259 75.3
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 9.4e-105 384.0 257 76.3
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 2.7e-104 382.5 294 71.8
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 1.0e-103 380.6 282 73.4
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 2.3e-103 379.4 257 75.1
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 1.5e-102 376.7 223 87.0
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 3.4e-102 375.6 223 86.1
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 4.4e-102 375.2 255 75.7
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 4.8e-101 371.7 259 74.1
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 6.3e-101 371.3 248 79.4
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 5.4e-100 368.2 255 76.1
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 5.4e-100 368.2 272 69.9
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 7.2e-97 357.8 260 70.8
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 2.8e-96 355.9 257 71.2
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 1.3e-93 347.1 255 70.6
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 1.4e-92 343.6 259 72.2
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.0e-91 339.7 252 68.3
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 1.0e-87 327.4 260 69.6
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.0e-87 327.4 253 66.0
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 7.0e-84 314.7 210 78.6
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 2.0e-83 313.2 252 66.7
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.0e-66 256.1 177 74.6
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-65 252.7 272 50.4
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.1e-63 247.7 171 76.6
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.7e-61 240.4 259 56.4
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.9e-60 236.9 152 80.3
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.3e-57 226.1 152 79.6
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 7.1e-52 208.4 243 45.7
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 4.0e-47 192.6 259 48.6
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 4.0e-47 192.6 254 41.7
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.1e-39 166.4 233 41.6
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 7.9e-35 151.8 98 75.5
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 6.7e-34 148.7 96 81.2
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 7.4e-33 145.2 239 36.8
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.5e-28 130.2 75 85.3
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 4.2e-28 129.4 119 61.3
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.1e-25 121.3 73 80.8
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 5.7e-25 119.0 236 34.7
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 5.9e-22 109.0 98 59.2
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 2.8e-08 63.5 42 73.8


User provided reference genes

Program Settings