Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p27750 Brassica napus HOM05D003139 ORTHO05D003540 2.7e-80 302.0 155 100.0
BraA04t18268Z Brassica rapa HOM05D003139 ORTHO05D003540 8.6e-79 297.0 155 98.7
BolC4t28004H Brassica oleracea HOM05D003139 ORTHO05D003540 9.5e-78 293.5 155 97.4
BcaC02g07620 Brassica carinata HOM05D003139 ORTHO05D003540 8.9e-76 287.0 155 95.5
BcaB06g28923 Brassica carinata HOM05D003139 ORTHO05D003540 2.3e-55 219.2 150 83.3
Sp4g18440 Schrenkiella parvula HOM05D003139 ORTHO05D003540 1.6e-53 213.0 149 79.9
Thhalv10017798m.g Eutrema salsugineum HOM05D003139 ORTHO05D003540 1.9e-46 189.5 149 73.8
BraA05t19916Z Brassica rapa HOM05D003139 ORTHO05D003540 1.4e-44 183.3 150 73.3
A05p09620 Brassica napus HOM05D003139 ORTHO05D003540 5.3e-44 181.4 150 72.7
BcaC02g11724 Brassica carinata HOM05D003139 ORTHO05D003540 2.6e-43 179.1 150 72.0
C04p11930 Brassica napus HOM05D003139 ORTHO05D003540 2.6e-43 179.1 150 72.0
BolC4t22840H Brassica oleracea HOM05D003139 ORTHO05D003540 2.6e-43 179.1 150 72.0
BcaB02g09375 Brassica carinata HOM05D003139 ORTHO05D003540 2.9e-42 175.6 150 70.7
AT2G36220 Arabidopsis thaliana HOM05D003139 ORTHO05D003540 1.2e-40 170.2 156 67.9
AL4G32320 Arabidopsis lyrata HOM05D003139 ORTHO05D003540 6.6e-39 164.5 156 66.7
CARHR130460 Cardamine hirsuta HOM05D003139 ORTHO05D003540 7.3e-38 161.0 160 62.5
Thhalv10011162m.g Eutrema salsugineum HOM05D003139 ORTHO05D003540 2.4e-33 146.0 179 55.3
C04p65250 Brassica napus HOM05D003139 ORTHO05D003540 2.1e-32 142.9 92 80.4
THA.LOC104827508 Tarenaya hassleriana HOM05D003139 ORTHO05D003540 4.6e-32 141.7 162 56.8
Carub.0005s1916 Capsella rubella HOM05D003139 ORTHO05D003540 7.9e-32 141.0 188 54.3
CARHR162580 Cardamine hirsuta HOM05D003139 ORTHO05D003540 1.3e-31 140.2 179 54.2
AL5G33470 Arabidopsis lyrata HOM05D003139 ORTHO05D003540 2.5e-30 136.0 181 51.9
THA.LOC104804904 Tarenaya hassleriana HOM05D003139 ORTHO05D003540 1.6e-29 133.3 175 53.1
AT3G52710 Arabidopsis thaliana HOM05D003139 ORTHO05D003540 8.1e-29 131.0 180 50.6
Sp5g09630 Schrenkiella parvula HOM05D003139 ORTHO05D003540 8.1e-29 131.0 179 52.0
BcaC07g39636 Brassica carinata HOM05D003139 ORTHO05D003540 1.4e-28 130.2 175 49.7
C08p27990 Brassica napus HOM05D003139 ORTHO05D003540 1.4e-28 130.2 175 49.7
BolC8t50411H Brassica oleracea HOM05D003139 ORTHO05D003540 1.4e-28 130.2 175 49.7
Aa31LG10G7720 Aethionema arabicum HOM05D003139 ORTHO05D003540 4.0e-28 128.6 179 50.3
A09p45800 Brassica napus HOM05D003139 ORTHO05D003540 3.4e-27 125.6 175 48.6
BraA09t40041Z Brassica rapa HOM05D003139 ORTHO05D003540 3.4e-27 125.6 175 48.6
Carub.0004s1798 Capsella rubella HOM05D003139 ORTHO05D003540 6.5e-26 121.3 155 56.8
BcaB01g00349 Brassica carinata HOM05D003139 ORTHO05D003540 1.1e-25 120.6 168 50.6
Aa31LG5G21340 Aethionema arabicum HOM05D003139 ORTHO05D003540 1.9e-25 119.8 151 57.6
BcaC02g09232 Brassica carinata HOM05D003139 ORTHO05D003540 3.7e-21 105.5 175 45.7
C04p40300 Brassica napus HOM05D003139 ORTHO05D003540 1.1e-20 104.0 177 45.2
TWI53G0306 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 6.1e-16 88.2 184 42.9
PGR142G1499 Punica granatum HOM05D003139 ORTHO05D003540 1.8e-15 86.7 177 40.7
Cpa.g.sc5.12 Carica papaya HOM05D003139 ORTHO05D003540 3.0e-15 85.9 180 41.1
Duzib128G1370 Durio zibethinus HOM05D003139 ORTHO05D003540 3.9e-15 85.5 168 45.8
Duzib093G1338 Durio zibethinus HOM05D003139 ORTHO05D003540 1.5e-14 83.6 165 42.4
MD12G1024700 Malus domestica HOM05D003139 ORTHO05D003540 1.9e-14 83.2 176 43.2
Manes.08G025900 Manihot esculenta HOM05D003139 ORTHO05D003540 1.9e-14 83.2 149 45.6
Prupe.7G109200 Prunus persica HOM05D003139 ORTHO05D003540 5.7e-14 81.6 177 42.4
COL.COLO4_29723 Corchorus olitorius HOM05D003139 ORTHO05D003540 9.7e-14 80.9 169 40.2
Potri.006G212800 Populus trichocarpa HOM05D003139 ORTHO05D003540 9.7e-14 80.9 183 38.8
ClCG10G018920 Citrullus lanatus HOM05D003139 ORTHO05D003540 1.3e-13 80.5 162 43.2
Gohir.A01G206000 Gossypium hirsutum HOM05D003139 ORTHO05D003540 2.2e-13 79.7 166 43.4
TWI74G1218 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 2.8e-13 79.3 188 38.8
CsaV3_3G037330 Cucumis sativus L. HOM05D003139 ORTHO05D003540 3.7e-13 79.0 162 43.2
Duzib106G1991 Durio zibethinus HOM05D003139 ORTHO05D003540 3.7e-13 79.0 165 41.2
QL07p038927 Quercus lobata HOM05D003139 ORTHO05D003540 3.7e-13 79.0 162 41.4
Sed0002377 Sechium edule HOM05D003139 ORTHO05D003540 4.8e-13 78.6 152 43.4
CANSAT64G2974 Cannabis sativa HOM05D003139 ORTHO05D003540 6.3e-13 78.2 170 40.6
Gohir.D01G195400 Gossypium hirsutum HOM05D003139 ORTHO05D003540 8.2e-13 77.8 166 42.8
Gorai.002G239600 Gossypium raimondii HOM05D003139 ORTHO05D003540 8.2e-13 77.8 166 42.8
Thecc.05G090100 Theobroma cacao HOM05D003139 ORTHO05D003540 8.2e-13 77.8 169 43.2
Haze_19619 Corylus avellana HOM05D003139 ORTHO05D003540 1.1e-12 77.4 170 41.8
MD14G1023600 Malus domestica HOM05D003139 ORTHO05D003540 1.1e-12 77.4 177 41.2
Cfa016615 Carpinus fangiana HOM05D003139 ORTHO05D003540 2.4e-12 76.3 170 42.4
Gohir.A04G062300 Gossypium hirsutum HOM05D003139 ORTHO05D003540 2.4e-12 76.3 161 42.2
Gohir.D04G099100 Gossypium hirsutum HOM05D003139 ORTHO05D003540 2.4e-12 76.3 161 42.2
Gorai.009G401500 Gossypium raimondii HOM05D003139 ORTHO05D003540 2.4e-12 76.3 161 42.2
Sabra06G0163800 Salix brachista HOM05D003139 ORTHO05D003540 2.4e-12 76.3 185 36.2
Sed0022451 Sechium edule HOM05D003139 ORTHO05D003540 2.4e-12 76.3 165 40.0
CiPaw.09G014800 Carya illinoinensis HOM05D003139 ORTHO05D003540 4.1e-12 75.5 174 41.4
CiPaw.10G010300 Carya illinoinensis HOM05D003139 ORTHO05D003540 1.5e-11 73.6 174 39.7
FvH4_6g18850 Fragaria vesca HOM05D003139 ORTHO05D003540 2.0e-11 73.2 165 39.4
FAN02G0223 Fragaria x ananassa HOM05D003139 ORTHO05D003540 2.6e-11 72.8 165 39.4
FAN05G0400 Fragaria x ananassa HOM05D003139 ORTHO05D003540 2.6e-11 72.8 165 39.4
FAN05G1773 Fragaria x ananassa HOM05D003139 ORTHO05D003540 2.6e-11 72.8 165 39.4
Gohir.D09G135100 Gossypium hirsutum HOM05D003139 ORTHO05D003540 2.6e-11 72.8 162 40.1
Glyma.03G196500 Glycine max HOM05D003139 ORTHO05D003540 3.4e-11 72.4 176 38.6
FAN09G1837 Fragaria x ananassa HOM05D003139 ORTHO05D003540 4.5e-11 72.0 160 38.8
FAN14G1758 Fragaria x ananassa HOM05D003139 ORTHO05D003540 4.5e-11 72.0 165 39.4
PSO384G0491 Papaver somniferum HOM05D003139 ORTHO05D003540 5.9e-11 71.6 165 35.8
Glyma.19G194957 Glycine max HOM05D003139 ORTHO05D003540 1.0e-10 70.9 177 39.5
Gorai.006G155000 Gossypium raimondii HOM05D003139 ORTHO05D003540 1.0e-10 70.9 162 38.9
Gohir.A09G139500 Gossypium hirsutum HOM05D003139 ORTHO05D003540 1.3e-10 70.5 162 40.1
Sed0010191 Sechium edule HOM05D003139 ORTHO05D003540 1.3e-10 70.5 158 41.1
Atru.chr8.1495 Acer truncatum HOM05D003139 ORTHO05D003540 1.7e-10 70.1 172 41.3
VMungo1383G1679 Vigna mungo HOM05D003139 ORTHO05D003540 2.9e-10 69.3 170 40.0
Ciclev10012256m.g Citrus clementina HOM05D003139 ORTHO05D003540 3.8e-10 68.9 158 41.1
Manes.09G054800 Manihot esculenta HOM05D003139 ORTHO05D003540 5.0e-10 68.6 158 39.2
CsaV3_6G040710 Cucumis sativus L. HOM05D003139 ORTHO05D003540 6.5e-10 68.2 165 41.2
PSO339G1651 Papaver somniferum HOM05D003139 ORTHO05D003540 8.5e-10 67.8 168 33.9
ECA247G2190 Erigeron canadensis HOM05D003139 ORTHO05D003540 2.5e-09 66.2 129 39.5
Sc20g0006320 Simmondsia chinensis HOM05D003139 ORTHO05D003540 2.5e-09 66.2 168 36.9
Sabra16G0085400 Salix brachista HOM05D003139 ORTHO05D003540 7.2e-09 64.7 190 34.2
Nn6g34887 Nelumbo nucifera HOM05D003139 ORTHO05D003540 9.4e-09 64.3 161 32.3
Phvul.001G190700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 1.2e-08 63.9 168 39.9
Potri.016G079500 Populus trichocarpa HOM05D003139 ORTHO05D003540 1.6e-08 63.5 180 36.1
Lj1g0000022 Lotus japonicus HOM05D003139 ORTHO05D003540 2.1e-08 63.2 162 39.5
Psat6g080520 Pisum sativum HOM05D003139 ORTHO05D003540 3.6e-08 62.4 159 38.4
TAR633G0951 Trochodendron aralioides HOM05D003139 ORTHO05D003540 3.6e-08 62.4 154 36.4
Dinv21200 Davidia involucrata HOM05D003139 ORTHO05D003540 4.6e-08 62.0 137 41.6
Eucgr.K02030 Eucalyptus grandis HOM05D003139 ORTHO05D003540 4.6e-08 62.0 161 37.3
Oeu047203.1 Olea europaea HOM05D003139 ORTHO05D003540 4.6e-08 62.0 147 40.8
Psat3g032560 Pisum sativum HOM05D003139 ORTHO05D003540 6.1e-08 61.6 166 38.0
Lalb_Chr25g0288311 Lupinus albus HOM05D003139 ORTHO05D003540 7.9e-08 61.2 168 36.9
Ca_08987_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 1.0e-07 60.8 169 38.5
DCAR_009168 Daucus carota HOM05D003139 ORTHO05D003540 1.0e-07 60.8 104 39.4
Lj5g0002620 Lotus japonicus HOM05D003139 ORTHO05D003540 1.8e-07 60.1 176 39.8
AUR62006190 Chenopodium quinoa HOM05D003139 ORTHO05D003540 3.9e-07 58.9 133 35.3
ECA248G2961 Erigeron canadensis HOM05D003139 ORTHO05D003540 6.7e-07 58.2 129 41.9
HanXRQChr01g0010381 Helianthus annuus HOM05D003139 ORTHO05D003540 6.7e-07 58.2 143 37.1
Ca_00900_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 1.1e-06 57.4 176 36.9
Lalb_Chr20g0111681 Lupinus albus HOM05D003139 ORTHO05D003540 1.1e-06 57.4 154 35.1
Nitab4.5_0000692g0050 Nicotiana tabacum HOM05D003139 ORTHO05D003540 1.1e-06 57.4 129 39.5
ClCG04G010080 Citrullus lanatus HOM05D003139 ORTHO05D003540 1.5e-06 57.0 168 35.7
Ah.15g090850 Amaranthus hybridus HOM05D003139 ORTHO05D003540 2.5e-06 56.2 137 36.5
TPR.G23344 Trifolium pratense HOM05D003139 ORTHO05D003540 2.5e-06 56.2 146 37.7
Eucgr.A02660 Eucalyptus grandis HOM05D003139 ORTHO05D003540 3.3e-06 55.8 134 38.8
Lsat_1_v5_gn_8_77361 Lactuca sativa HOM05D003139 ORTHO05D003540 4.3e-06 55.5 139 36.7
Oeu047862.1 Olea europaea HOM05D003139 ORTHO05D003540 4.3e-06 55.5 139 39.6
PGR004G2661 Punica granatum HOM05D003139 ORTHO05D003540 4.3e-06 55.5 163 32.5
Rhsim04G0132000 Rhododendron simsii HOM05D003139 ORTHO05D003540 4.3e-06 55.5 123 39.8
HanXRQChr04g0109341 Helianthus annuus HOM05D003139 ORTHO05D003540 7.4e-06 54.7 127 38.6
Aqoxy4G02769 Aquilegia oxysepala HOM05D003139 ORTHO05D003540 9.7e-06 54.3 164 32.9


User provided reference genes

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