Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p25560 Brassica napus HOM05D004244 ORTHO05D004964 1.4e-196 689.5 378 100.0
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 4.9e-128 461.8 289 86.5
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 1.6e-126 456.8 289 85.8
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 2.6e-121 439.5 298 84.2
BcaC02g07847 Brassica carinata HOM05D004244 ORTHO05D004964 1.2e-118 430.6 278 86.7
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 2.3e-101 373.2 282 81.2
Sp4g15550 Schrenkiella parvula HOM05D004244 ORTHO05D004964 2.6e-89 333.2 293 70.6
Thhalv10017015m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 1.6e-86 323.9 288 68.4
Carub.0004s1471 Capsella rubella HOM05D004244 ORTHO05D004964 2.6e-81 306.6 291 66.7
AL4G28880 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 3.6e-78 296.2 292 61.3
AT2G33250 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 6.1e-78 295.4 293 64.5
CARHR127250 Cardamine hirsuta HOM05D004244 ORTHO05D004964 3.7e-75 286.2 292 63.7
Aa31LG5G4140 Aethionema arabicum HOM05D004244 ORTHO05D004964 7.2e-63 245.4 305 54.4
BcaC02g07850 Brassica carinata HOM05D004244 ORTHO05D004964 2.7e-62 243.4 163 86.5
THA.LOC104826102 Tarenaya hassleriana HOM05D004244 ORTHO05D004964 4.9e-27 126.3 180 44.4
Cpa.g.sc59.37 Carica papaya HOM05D004244 ORTHO05D004964 1.3e-19 101.7 176 39.2
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 3.2e-18 97.1 173 38.2
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 3.2e-18 97.1 173 38.2
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 5.4e-18 96.3 175 36.0
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 7.1e-18 95.9 181 38.1
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 7.1e-18 95.9 262 35.5
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 1.6e-17 94.7 175 36.0
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 1.6e-17 94.7 173 37.6
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 1.7e-16 91.3 176 37.5
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 3.9e-16 90.1 172 35.5
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 5.1e-16 89.7 175 38.9
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 6.6e-16 89.4 172 35.5
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 6.6e-16 89.4 172 37.8
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 8.7e-16 89.0 174 37.4
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 1.5e-15 88.2 175 36.6
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 5.6e-15 86.3 174 36.8
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 7.3e-15 85.9 168 34.5
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 7.3e-15 85.9 180 33.9
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.2e-14 85.1 283 31.8
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 1.6e-14 84.7 168 35.7
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.6e-14 84.7 256 34.4
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 2.8e-14 84.0 170 37.6
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 6.2e-14 82.8 179 33.5
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 6.2e-14 82.8 316 30.7
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 6.2e-14 82.8 176 36.9
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 1.1e-13 82.0 170 37.1
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 1.1e-13 82.0 221 33.0
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 1.1e-13 82.0 172 34.3
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 1.8e-13 81.3 170 35.9
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 2.4e-13 80.9 174 34.5
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 3.1e-13 80.5 296 28.0
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 3.1e-13 80.5 176 34.7
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 5.2e-13 79.7 180 35.0
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 5.2e-13 79.7 179 36.9
Atru.chr4.1873 Acer truncatum HOM05D004244 ORTHO05D004964 6.9e-13 79.3 173 37.0
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 9.0e-13 79.0 174 33.3
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 9.0e-13 79.0 179 33.0
Hund24865 Selenicereus undatus HOM05D004244 ORTHO05D004964 1.2e-12 78.6 134 36.6
ECA238G3737 Erigeron canadensis HOM05D004244 ORTHO05D004964 1.5e-12 78.2 141 36.2
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 1.5e-12 78.2 169 33.1
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 2.0e-12 77.8 126 38.9
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 2.6e-12 77.4 298 29.2
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 5.8e-12 76.3 191 30.9
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 7.6e-12 75.9 180 33.3
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 7.6e-12 75.9 275 28.7
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 7.6e-12 75.9 182 31.9
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 1.3e-11 75.1 187 32.1
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 1.7e-11 74.7 285 29.8
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 1.7e-11 74.7 180 32.8
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.9e-11 73.9 174 33.9
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.9e-11 73.9 174 33.9
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 3.8e-11 73.6 180 31.1
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 6.4e-11 72.8 184 31.0
Duzib151G0660 Durio zibethinus HOM05D004244 ORTHO05D004964 1.4e-10 71.6 60 55.0
Actinidia39939 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.9e-10 71.2 179 34.6
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 1.9e-10 71.2 164 28.7
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 3.2e-10 70.5 59 52.5
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 3.2e-10 70.5 179 31.8
Sed0027895 Sechium edule HOM05D004244 ORTHO05D004964 4.2e-10 70.1 143 32.9
Sabra10G0043500 Salix brachista HOM05D004244 ORTHO05D004964 7.1e-10 69.3 177 32.8
unitig_26.g9547 Utricularia gibba HOM05D004244 ORTHO05D004964 9.3e-10 68.9 182 31.9
Duzib266G0003 Durio zibethinus HOM05D004244 ORTHO05D004964 1.2e-09 68.6 67 47.8
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 3.5e-09 67.0 184 31.0
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 3.5e-09 67.0 181 34.3
Sc19g0005660 Simmondsia chinensis HOM05D004244 ORTHO05D004964 4.6e-09 66.6 246 28.9
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.0e-08 65.5 184 27.7
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 1.0e-08 65.5 184 27.7
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 1.3e-08 65.1 120 30.8
Migut.N00322 Erythranthe guttata HOM05D004244 ORTHO05D004964 1.7e-08 64.7 196 27.0
SGA_v2.0_scaffold398G50771 Striga asiatica HOM05D004244 ORTHO05D004964 1.7e-08 64.7 127 34.6
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 2.3e-08 64.3 145 32.4
Solyc09g091010.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 2.3e-08 64.3 172 32.6
MSTRG.24646 Avicennia marina HOM05D004244 ORTHO05D004964 3.0e-08 63.9 271 25.1
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 3.0e-08 63.9 181 27.6
Sopen09g033990 Solanum pennellii HOM05D004244 ORTHO05D004964 3.0e-08 63.9 172 31.4
COL.COLO4_15535 Corchorus olitorius HOM05D004244 ORTHO05D004964 3.9e-08 63.5 172 27.3
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 6.6e-08 62.8 183 30.6
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 1.1e-07 62.0 160 32.5
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 1.9e-07 61.2 158 31.6
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 4.3e-07 60.1 176 33.0
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 5.6e-07 59.7 179 25.7
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 9.6e-07 58.9 187 28.3
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 9.6e-07 58.9 185 28.6
Ciclev10005346m.g Citrus clementina HOM05D004244 ORTHO05D004964 9.6e-07 58.9 132 34.1
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 1.3e-06 58.5 175 31.4
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 1.6e-06 58.2 177 29.9
Medtr4g088590 Medicago truncatula HOM05D004244 ORTHO05D004964 2.1e-06 57.8 49 57.1
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 2.1e-06 57.8 178 30.3
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 3.6e-06 57.0 175 28.6


User provided reference genes

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