Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 1.7e-88 329.3 167 100.0
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 4.6e-86 321.2 167 97.6
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 4.6e-86 321.2 167 97.6
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 1.7e-85 319.3 167 97.6
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 1.5e-84 316.2 167 95.8
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 1.5e-81 306.2 167 94.0
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 4.6e-78 294.7 167 88.6
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 1.2e-73 280.0 167 85.0
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 3.4e-65 251.9 167 77.8
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 4.5e-65 251.5 167 79.6
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 4.5e-65 251.5 167 79.6
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 9.9e-65 250.4 167 77.2
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 6.4e-64 247.7 167 76.6
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 4.5e-57 224.9 167 68.9
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 6.3e-43 177.9 178 57.3
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 6.3e-43 177.9 112 78.6
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 1.1e-42 177.2 173 58.4
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 5.3e-42 174.9 115 76.5
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 2.2e-40 169.5 109 77.1
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 2.9e-40 169.1 118 72.9
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 1.4e-39 166.8 116 72.4
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 1.9e-39 166.4 119 69.7
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 1.2e-38 163.7 121 70.2
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 2.1e-38 162.9 109 75.2
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 3.6e-38 162.2 130 65.4
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.0e-37 160.6 129 62.0
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.4e-37 160.2 166 53.0
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 3.0e-37 159.1 120 67.5
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 6.7e-37 157.9 107 72.9
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 6.7e-37 157.9 93 80.6
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 6.7e-37 157.9 173 54.3
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 6.7e-37 157.9 96 80.2
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 1.5e-36 156.8 109 70.6
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.5e-36 156.8 97 78.4
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 1.9e-36 156.4 96 79.2
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 1.9e-36 156.4 93 79.6
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 1.9e-36 156.4 166 54.8
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 2.5e-36 156.0 112 72.3
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 4.3e-36 155.2 96 78.1
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 5.7e-36 154.8 92 81.5
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 7.4e-36 154.5 155 54.2
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 7.4e-36 154.5 112 70.5
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 9.7e-36 154.1 129 59.7
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 9.7e-36 154.1 94 77.7
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 9.7e-36 154.1 96 77.1
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 9.7e-36 154.1 96 77.1
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 9.7e-36 154.1 96 77.1
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.3e-35 153.7 157 54.8
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 1.3e-35 153.7 117 65.0
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 2.2e-35 152.9 96 77.1
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 2.2e-35 152.9 93 79.6
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.2e-35 152.9 93 78.5
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.2e-35 152.9 93 78.5
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 2.2e-35 152.9 104 71.2
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 2.8e-35 152.5 93 79.6
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 2.8e-35 152.5 113 68.1
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 2.8e-35 152.5 118 65.3
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 3.7e-35 152.1 96 75.0
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 3.7e-35 152.1 94 76.6
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 4.8e-35 151.8 93 77.4
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.8e-35 151.8 93 77.4
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.8e-35 151.8 93 77.4
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 4.8e-35 151.8 93 75.3
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 4.8e-35 151.8 93 75.3
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 6.3e-35 151.4 159 54.1
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 8.2e-35 151.0 132 58.3
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 8.2e-35 151.0 96 75.0
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 8.2e-35 151.0 96 75.0
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 1.8e-34 149.8 135 61.5
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 2.4e-34 149.4 105 71.4
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 3.1e-34 149.1 96 76.0
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 3.1e-34 149.1 161 49.7
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 6.9e-34 147.9 142 56.3
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.5e-33 146.7 114 64.9
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 1.5e-33 146.7 111 67.6
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 1.5e-33 146.7 118 65.3
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 2.6e-33 146.0 114 64.9
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.7e-32 143.3 100 71.0
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.7e-32 143.3 100 71.0
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 6.5e-32 141.4 100 67.0
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 6.5e-32 141.4 105 71.4
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 8.5e-32 141.0 93 72.0
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 4.2e-31 138.7 95 70.5
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 7.2e-31 137.9 100 67.0
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 4.7e-30 135.2 128 57.8
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 7.9e-30 134.4 93 69.9
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 5.7e-28 128.3 79 79.7
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 7.4e-28 127.9 71 83.1
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 9.1e-26 120.9 93 65.6
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.0e-24 117.5 96 64.6
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 2.9e-24 115.9 89 61.8
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 5.0e-24 115.2 106 54.7
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 9.4e-23 110.9 76 71.1
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.2e-22 110.5 62 80.6
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 4.7e-22 108.6 64 76.6
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 8.0e-22 107.8 63 79.4
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 5.2e-21 105.1 110 52.7
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 6.3e-19 98.2 62 71.0
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.8e-18 96.7 63 68.3
Gohir.A10G120700 Gossypium hirsutum HOM05D007635 ORTHO05D009612 5.7e-12 75.1 51 72.5
Gohir.D10G145600 Gossypium hirsutum HOM05D007635 ORTHO05D009612 2.8e-11 72.8 51 70.6
Thecc.04G214500 Theobroma cacao HOM05D007635 ORTHO05D009612 6.3e-11 71.6 50 72.0


User provided reference genes

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