Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p25230 Brassica napus HOM05D009335 ORTHO05D012740 3.2e-23 112.8 67 100.0
BraA04t18024Z Brassica rapa HOM05D009335 ORTHO05D012740 7.1e-23 111.7 67 98.5
BcaC02g07893 Brassica carinata HOM05D009335 ORTHO05D012740 2.1e-22 110.2 67 97.0
BolC4t27702H Brassica oleracea HOM05D009335 ORTHO05D012740 2.1e-22 110.2 67 97.0
AT2G32690 Arabidopsis thaliana HOM05D009335 ORTHO05D012740 7.4e-20 101.7 65 93.8
BcaB02g10490 Brassica carinata HOM05D009335 ORTHO05D012740 7.4e-20 101.7 67 76.1
AL4G28130 Arabidopsis lyrata HOM05D009335 ORTHO05D012740 9.6e-20 101.3 65 93.8
BcaC02g11351 Brassica carinata HOM05D009335 ORTHO05D012740 1.3e-19 100.9 65 78.5
C04p16970 Brassica napus HOM05D009335 ORTHO05D012740 1.3e-19 100.9 65 78.5
CARHR126580 Cardamine hirsuta HOM05D009335 ORTHO05D012740 1.6e-19 100.5 65 92.3
A03p18250 Brassica napus HOM05D009335 ORTHO05D012740 3.8e-16 89.4 67 68.7
Carub.0004s1405 Capsella rubella HOM05D009335 ORTHO05D012740 6.5e-16 88.6 72 81.9
BraA03t11085Z Brassica rapa HOM05D009335 ORTHO05D012740 1.1e-15 87.8 67 67.2
BcaC01g05897 Brassica carinata HOM05D009335 ORTHO05D012740 1.9e-15 87.0 67 67.2
C03p21300 Brassica napus HOM05D009335 ORTHO05D012740 1.9e-15 87.0 67 67.2
BolC3t14512H Brassica oleracea HOM05D009335 ORTHO05D012740 1.9e-15 87.0 67 67.2
BcaB01g03966 Brassica carinata HOM05D009335 ORTHO05D012740 2.5e-15 86.7 67 67.2
Sp4g15030 Schrenkiella parvula HOM05D009335 ORTHO05D012740 1.5e-12 77.4 40 90.0
THA.LOC104801041 Tarenaya hassleriana HOM05D009335 ORTHO05D012740 5.7e-12 75.5 67 59.7
Aa31LG5G4340 Aethionema arabicum HOM05D009335 ORTHO05D012740 9.6e-12 74.7 68 60.3
CARHR004190 Cardamine hirsuta HOM05D009335 ORTHO05D015386 2.0e-09 67.0 67 53.7
A10p03230 Brassica napus HOM05D009335 ORTHO05D015386 1.4e-07 60.8 70 50.0
BcaB02g06901 Brassica carinata HOM05D009335 ORTHO05D015386 5.5e-07 58.9 70 51.4
BraA10t42597Z Brassica rapa HOM05D009335 ORTHO05D015386 7.2e-07 58.5 70 48.6
BcaC05g24439 Brassica carinata HOM05D009335 ORTHO05D015386 7.9e-06 55.1 71 47.9
C05p02980 Brassica napus HOM05D009335 ORTHO05D015386 7.9e-06 55.1 71 47.9
BolC5t29079H Brassica oleracea HOM05D009335 ORTHO05D015386 7.9e-06 55.1 71 47.9


User provided reference genes

Program Settings