Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p24110 Brassica napus HOM05D006246 ORTHO05D007932 5.7e-29 131.0 108 100.0
BraA04t17931Z Brassica rapa HOM05D006246 ORTHO05D007932 5.7e-29 131.0 108 100.0
BcaB06g28525 Brassica carinata HOM05D006246 ORTHO05D007932 6.3e-28 127.5 108 94.4
C04p60820 Brassica napus HOM05D006246 ORTHO05D007932 6.3e-28 127.5 108 98.1
BolC4t27573H Brassica oleracea HOM05D006246 ORTHO05D007932 6.3e-28 127.5 108 94.4
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 1.1e-21 106.7 108 76.9
AT2G31305 Arabidopsis thaliana HOM05D006246 ORTHO05D007932 1.5e-21 106.3 110 87.3
BcaB06g28444 Brassica carinata HOM05D006246 ORTHO05D007932 3.3e-21 105.1 109 93.6
BraA05t20360Z Brassica rapa HOM05D006246 ORTHO05D007932 4.4e-21 104.8 108 90.7
AL4G26530 Arabidopsis lyrata HOM05D006246 ORTHO05D007932 3.7e-20 101.7 111 90.1
C04p19050 Brassica napus HOM05D006246 ORTHO05D007932 3.7e-20 101.7 112 85.7
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 6.3e-20 100.9 109 76.1
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 2.4e-19 99.0 112 75.0
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 2.4e-19 99.0 112 75.0
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 4.1e-19 98.2 111 73.9
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 1.5e-18 96.3 58 93.1
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 2.6e-18 95.5 115 73.9
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 1.0e-17 93.6 111 73.9
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 1.7e-17 92.8 58 89.7
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 6.5e-17 90.9 58 89.7
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 4.2e-16 88.2 58 86.2
AL2G35340 Arabidopsis lyrata HOM05D006246 ORTHO05D007932 3.3e-13 78.6 50 90.0
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 5.7e-13 77.8 58 79.3
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 5.9e-10 67.8 58 70.7
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 4.2e-08 61.6 53 62.3
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 5.5e-08 61.2 57 61.4
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 7.2e-08 60.8 57 63.2
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 9.4e-08 60.5 44 77.3
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 1.2e-07 60.1 57 63.2
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 2.1e-07 59.3 41 78.0
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 2.7e-07 58.9 56 62.5
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 3.6e-07 58.5 44 75.0
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 6.1e-07 57.8 60 58.3
TWI14G1413 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 1.8e-06 56.2 54 59.3
CARHR068770 Cardamine hirsuta HOM05D006246 ORTHO05D007932 3.0e-06 55.5 41 73.2
Potri.005G067400 Populus trichocarpa HOM05D006246 ORTHO05D007932 6.7e-06 54.3 40 72.5
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 8.8e-06 53.9 57 59.6


User provided reference genes

Program Settings