Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p23960 Brassica napus HOM05D047153 ORTHO05D041738 9.6e-95 350.1 175 100.0
BraA04t17920Z Brassica rapa HOM05D047153 ORTHO05D041738 9.6e-95 350.1 175 100.0
BcaB02g06815 Brassica carinata HOM05D003989 ORTHO05D004626 2.0e-07 60.1 35 77.1
BcaB03g13432 Brassica carinata HOM05D003989 ORTHO05D004626 4.4e-07 58.9 35 77.1
BolC5t29223H Brassica oleracea HOM05D003989 ORTHO05D004626 5.8e-07 58.5 35 74.3
CARHR005730 Cardamine hirsuta HOM05D003989 ORTHO05D004626 5.8e-07 58.5 35 74.3
Thhalv10008791m.g Eutrema salsugineum HOM05D003989 ORTHO05D004626 5.8e-07 58.5 35 74.3
Sp1g05010 Schrenkiella parvula HOM05D003989 ORTHO05D004626 5.8e-07 58.5 35 74.3
AL4G26330 Arabidopsis lyrata HOM05D003989 ORTHO05D004626 7.6e-07 58.2 32 81.2
C05p04520 Brassica napus HOM05D003989 ORTHO05D004626 7.6e-07 58.2 32 81.2
CARHR124740 Cardamine hirsuta HOM05D003989 ORTHO05D004626 7.6e-07 58.2 32 78.1
BcaC05g24296 Brassica carinata HOM05D003989 ORTHO05D004626 9.9e-07 57.8 32 78.1
BraA03t11012Z Brassica rapa HOM05D003989 ORTHO05D004626 9.9e-07 57.8 32 84.4
BraA10t42752Z Brassica rapa HOM05D003989 ORTHO05D004626 9.9e-07 57.8 32 84.4
AL1G16180 Arabidopsis lyrata HOM05D003989 ORTHO05D004626 1.3e-06 57.4 35 71.4
AT1G06200 Arabidopsis thaliana HOM05D003989 ORTHO05D004626 1.3e-06 57.4 35 71.4
Thhalv10017243m.g Eutrema salsugineum HOM05D003989 ORTHO05D004626 1.3e-06 57.4 32 78.1
THA.LOC104800868 Tarenaya hassleriana HOM05D003989 ORTHO05D004626 1.3e-06 57.4 35 71.4
Sp4g13620 Schrenkiella parvula HOM05D003989 ORTHO05D004626 2.2e-06 56.6 32 78.1
Aa31LG5G5780 Aethionema arabicum HOM05D003989 ORTHO05D004626 2.9e-06 56.2 35 71.4
AT2G31140 Arabidopsis thaliana HOM05D003989 ORTHO05D004626 2.9e-06 56.2 32 78.1
BcaB01g04061 Brassica carinata HOM05D003989 ORTHO05D004626 2.9e-06 56.2 32 81.2
BcaC01g05976 Brassica carinata HOM05D003989 ORTHO05D004626 2.9e-06 56.2 32 81.2
C03p20540 Brassica napus HOM05D003989 ORTHO05D004626 2.9e-06 56.2 32 81.2
BolC3t14434H Brassica oleracea HOM05D003989 ORTHO05D004626 2.9e-06 56.2 32 81.2
Carub.0004s1243 Capsella rubella HOM05D003989 ORTHO05D004626 2.9e-06 56.2 32 75.0
C08p02410 Brassica napus HOM05D003989 ORTHO05D004626 3.8e-06 55.8 35 68.6
Carub.0001s0556 Capsella rubella HOM05D003989 ORTHO05D004626 3.8e-06 55.8 35 68.6
A04p23940 Brassica napus HOM05D003989 ORTHO05D004626 4.9e-06 55.5 33 78.8
BraA04t17918Z Brassica rapa HOM05D003989 ORTHO05D004626 4.9e-06 55.5 33 78.8
PGR044G1132 Punica granatum HOM05D003989 ORTHO05D004626 4.9e-06 55.5 77 36.4
A08p36100 Brassica napus HOM05D003989 ORTHO05D004626 6.4e-06 55.1 35 65.7
BraA08t35517Z Brassica rapa HOM05D003989 ORTHO05D004626 6.4e-06 55.1 35 65.7


User provided reference genes

Program Settings