Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p22450 Brassica napus HOM05D000075 ORTHO05D014840 8.6e-111 403.7 205 100.0
BcaC02g08085 Brassica carinata HOM05D000075 ORTHO05D014840 4.5e-75 285.0 177 81.4
BolC4t27377H Brassica oleracea HOM05D000075 ORTHO05D014840 4.8e-53 211.8 139 78.4
A05p24100 Brassica napus HOM05D000075 ORTHO05D014840 5.3e-52 208.4 190 63.2
BraA05t21290Z Brassica rapa HOM05D000075 ORTHO05D014840 5.9e-51 204.9 190 62.6
C04p58590 Brassica napus HOM05D000075 ORTHO05D014840 1.0e-50 204.1 121 80.2
BcaB06g28307 Brassica carinata HOM05D000075 ORTHO05D014840 1.4e-41 173.7 119 72.3
AL5G13790 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 5.4e-20 102.1 160 38.8
AL4G19150 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 2.9e-18 96.3 161 39.1
AL9U11090 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 4.2e-17 92.4 154 39.0
C07p13270 Brassica napus HOM05D023794 ORTHO05D028264 1.1e-12 77.8 207 30.4
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 3.1e-12 76.3 164 32.3
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 3.1e-12 76.3 166 31.3
BcaC03g12964 Brassica carinata HOM05D007309 ORTHO05D010099 4.1e-12 75.9 166 31.9
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 4.1e-12 75.9 166 31.9
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 7.0e-12 75.1 166 30.7
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 9.2e-12 74.7 166 31.9
AL4G34290 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.2e-11 74.3 165 29.7
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.2e-11 74.3 165 29.7
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 1.2e-11 74.3 166 31.9
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 1.6e-11 73.9 166 31.9
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 5.9e-11 72.0 160 33.1
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 5.9e-11 72.0 160 33.1
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 5.9e-11 72.0 160 33.1
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 7.8e-11 71.6 162 32.1
BolC7t41820H Brassica oleracea HOM05D023794 ORTHO05D028264 7.8e-11 71.6 164 32.9
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 2.9e-10 69.7 178 28.7
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 2.9e-10 69.7 178 28.7
BolC2t07109H Brassica oleracea HOM05D007309 ORTHO05D040036 1.1e-09 67.8 117 35.9
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 1.9e-09 67.0 138 32.6
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 4.3e-09 65.9 166 28.9
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 4.3e-09 65.9 166 28.9
AL4G33400 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 5.6e-09 65.5 150 30.7
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 1.6e-08 63.9 159 33.3
Thhalv10014870m.g Eutrema salsugineum HOM05D007309 ORTHO05D014840 1.6e-08 63.9 160 29.4
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 2.1e-08 63.5 164 32.3
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 4.7e-08 62.4 135 30.4
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 1.4e-07 60.8 156 31.4
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 4.0e-07 59.3 155 29.7
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 4.0e-07 59.3 162 27.2
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 5.2e-07 58.9 154 31.2
C02p01680 Brassica napus HOM05D007309 ORTHO05D014840 5.2e-07 58.9 165 29.7
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 5.2e-07 58.9 154 31.2
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 5.2e-07 58.9 164 29.9
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 5.2e-07 58.9 164 29.9
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 6.8e-07 58.5 155 29.0
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 2.0e-06 57.0 155 29.0
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 2.6e-06 56.6 180 27.2
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 5.7e-06 55.5 117 31.6
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 5.7e-06 55.5 155 28.4


User provided reference genes

Program Settings