Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p22140 Brassica napus HOM05D003551 ORTHO05D103594 7.8e-38 159.8 74 100.0
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 4.6e-14 80.9 44 81.8
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 4.6e-14 80.9 44 81.8
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 4.6e-14 80.9 44 81.8
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 4.6e-14 80.9 44 81.8
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 4.6e-14 80.9 44 81.8
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 3.0e-13 78.2 44 79.5
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 3.9e-13 77.8 44 79.5
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 8.7e-13 76.6 44 77.3
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 8.7e-13 76.6 44 77.3
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 9.6e-12 73.2 44 72.7
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 1.3e-11 72.8 45 71.1
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 4.8e-11 70.9 44 70.5
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 4.8e-11 70.9 44 70.5
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 1.4e-10 69.3 42 71.4
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 1.4e-10 69.3 43 69.8
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.1e-07 59.7 45 57.8
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.1e-07 59.7 45 57.8
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 1.9e-07 58.9 45 57.8
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 1.9e-07 58.9 45 57.8
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 3.2e-07 58.2 45 57.8
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 3.2e-07 58.2 45 57.8
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 4.2e-07 57.8 44 59.1
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 4.2e-07 57.8 45 55.6
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 4.2e-07 57.8 45 55.6
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 4.2e-07 57.8 45 55.6
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 5.5e-07 57.4 48 56.2
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 7.1e-07 57.0 44 59.1
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 7.1e-07 57.0 45 55.6
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 7.1e-07 57.0 45 55.6
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 7.1e-07 57.0 45 55.6
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 7.1e-07 57.0 45 57.8
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 7.1e-07 57.0 45 55.6
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 9.3e-07 56.6 45 55.6
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 9.3e-07 56.6 44 59.1
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 9.3e-07 56.6 44 59.1
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 9.3e-07 56.6 45 55.6
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 9.3e-07 56.6 48 56.2
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 1.2e-06 56.2 45 55.6
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 1.2e-06 56.2 45 55.6
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 1.2e-06 56.2 44 59.1
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 1.6e-06 55.8 44 56.8
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 1.6e-06 55.8 45 53.3
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 1.6e-06 55.8 45 53.3
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 1.6e-06 55.8 45 53.3
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 2.1e-06 55.5 45 55.6
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 2.1e-06 55.5 43 55.8
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 2.1e-06 55.5 45 53.3
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 2.1e-06 55.5 44 54.5
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 2.1e-06 55.5 44 54.5
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 2.1e-06 55.5 45 53.3
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 2.1e-06 55.5 45 53.3
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 2.1e-06 55.5 45 55.6
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 2.7e-06 55.1 43 58.1
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 2.7e-06 55.1 45 51.1
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 3.5e-06 54.7 43 55.8
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 3.5e-06 54.7 45 55.6
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 3.5e-06 54.7 45 53.3
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.6e-06 54.3 45 55.6
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.6e-06 54.3 45 55.6
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 6.0e-06 53.9 45 53.3
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 6.0e-06 53.9 45 53.3
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 6.0e-06 53.9 45 55.6
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 6.0e-06 53.9 45 53.3
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 7.9e-06 53.5 45 53.3
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 7.9e-06 53.5 48 52.1
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 7.9e-06 53.5 48 52.1
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 7.9e-06 53.5 45 53.3


User provided reference genes

Program Settings