Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p21020 Brassica napus HOM05D003012 ORTHO05D002833 1.2e-79 299.7 139 100.0
BraA04t17670Z Brassica rapa HOM05D003012 ORTHO05D002833 1.2e-79 299.7 139 100.0
C04p56810 Brassica napus HOM05D003012 ORTHO05D002833 1.2e-76 289.7 139 96.4
BolC4t27213H Brassica oleracea HOM05D003012 ORTHO05D002833 1.2e-76 289.7 139 96.4
C09p67280 Brassica napus HOM05D003012 ORTHO05D002833 2.3e-75 285.4 139 94.2
Thhalv10017589m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 4.7e-44 181.4 139 66.9
CARHR084960 Cardamine hirsuta HOM05D003012 ORTHO05D002833 1.4e-40 169.9 133 62.4
AL3G21830 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 3.0e-38 162.2 137 58.4
Carub.0003s0968 Capsella rubella HOM05D003012 ORTHO05D002833 8.9e-35 150.6 139 59.7
Carub.0001s4073 Capsella rubella HOM05D003012 ORTHO05D002833 4.4e-34 148.3 140 57.9
Aa31LG3G3260 Aethionema arabicum HOM05D003012 ORTHO05D002833 1.4e-32 143.3 129 54.3
A04p25490 Brassica napus HOM05D003012 ORTHO05D002833 2.4e-32 142.5 135 53.3
BraA04t18052Z Brassica rapa HOM05D003012 ORTHO05D002833 2.4e-32 142.5 135 53.3
Thhalv10017540m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 5.4e-32 141.4 143 54.5
C04p62630 Brassica napus HOM05D003012 ORTHO05D002833 1.2e-31 140.2 135 53.3
A04p25530 Brassica napus HOM05D001040 ORTHO05D002311 2.1e-31 139.4 121 55.4
BraA04t18057Z Brassica rapa HOM05D001040 ORTHO05D002311 2.1e-31 139.4 121 55.4
C04p62680 Brassica napus HOM05D001040 ORTHO05D002311 3.5e-31 138.7 121 55.4
BolC4t27751H Brassica oleracea HOM05D001040 ORTHO05D002311 3.5e-31 138.7 121 55.4
Carub.0007s3117 Capsella rubella HOM05D003012 ORTHO05D002833 4.6e-31 138.3 141 53.2
Aa31LG3G3280 Aethionema arabicum HOM05D003012 ORTHO05D002833 3.0e-30 135.6 126 56.3
BraA04t18054Z Brassica rapa HOM05D003012 ORTHO05D002833 1.5e-29 133.3 137 51.8
Aa31LG3G3270 Aethionema arabicum HOM05D003012 ORTHO05D002833 3.3e-29 132.1 126 54.0
C04p62660 Brassica napus HOM05D003012 ORTHO05D002833 3.3e-29 132.1 137 51.1
BolC4t27747H Brassica oleracea HOM05D003012 ORTHO05D002833 3.3e-29 132.1 137 51.1
Aa31LG3G3290 Aethionema arabicum HOM05D003012 ORTHO05D002833 4.3e-29 131.7 126 54.0
A04p25510 Brassica napus HOM05D003012 ORTHO05D002833 9.5e-29 130.6 137 50.4
C04p62640 Brassica napus HOM05D003012 ORTHO05D002833 1.2e-28 130.2 139 51.8
A03p28810 Brassica napus HOM05D004904 ORTHO05D002833 1.4e-27 126.7 134 48.5
BolC4t27745H Brassica oleracea HOM05D003012 ORTHO05D002833 1.8e-27 126.3 140 52.1
A06p47670 Brassica napus HOM05D004904 ORTHO05D002833 1.2e-26 123.6 131 46.6
BraA06t27634Z Brassica rapa HOM05D004904 ORTHO05D002833 1.2e-26 123.6 131 46.6
BolC3t15792H Brassica oleracea HOM05D004904 ORTHO05D002833 2.6e-26 122.5 137 45.3
A03p28790 Brassica napus HOM05D004904 ORTHO05D002833 5.8e-26 121.3 134 48.5
BraA03t12076Z Brassica rapa HOM05D004904 ORTHO05D002833 5.8e-26 121.3 134 48.5
Aa31LG3G3090 Aethionema arabicum HOM05D004904 ORTHO05D002833 9.9e-26 120.6 136 47.8
C03p34800 Brassica napus HOM05D004904 ORTHO05D002833 9.9e-26 120.6 124 50.8
Thhalv10017951m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 1.7e-25 119.8 98 60.2
Aa31LG3G3060 Aethionema arabicum HOM05D004904 ORTHO05D002833 2.2e-25 119.4 126 48.4
Aa31LG3G3320 Aethionema arabicum HOM05D003012 ORTHO05D002833 2.2e-25 119.4 139 51.8
A03p28780 Brassica napus HOM05D004904 ORTHO05D002833 2.9e-25 119.0 134 47.8
C07p26380 Brassica napus HOM05D004904 ORTHO05D002833 6.4e-25 117.9 131 43.5
BolC7t43165H Brassica oleracea HOM05D004904 ORTHO05D002833 6.4e-25 117.9 131 43.5
BraA03t12077Z Brassica rapa HOM05D004904 ORTHO05D002833 1.4e-24 116.7 137 42.3
Thhalv10029361m.g Eutrema salsugineum HOM05D004904 ORTHO05D002833 3.2e-24 115.5 123 48.8
C03p34820 Brassica napus HOM05D000042 ORTHO05D000028 4.1e-24 115.2 121 46.3
A01p24640 Brassica napus HOM05D004904 ORTHO05D002833 7.1e-24 114.4 134 44.8
Sp6g07620 Schrenkiella parvula HOM05D004904 ORTHO05D002833 7.1e-24 114.4 125 48.0
BcaB01g02770 Brassica carinata HOM05D004904 ORTHO05D002833 9.2e-24 114.0 124 48.4
Aa31LG3G3310 Aethionema arabicum HOM05D003012 ORTHO05D002833 2.1e-23 112.8 101 56.4
BcaC01g04697 Brassica carinata HOM05D004904 ORTHO05D002833 2.1e-23 112.8 119 46.2
A03p28800 Brassica napus HOM05D000042 ORTHO05D000028 4.6e-23 111.7 121 43.8
Aa31LG3G3250 Aethionema arabicum HOM05D003012 ORTHO05D002833 3.3e-21 105.5 134 44.0
Aa31LG11G9250 Aethionema arabicum HOM05D004904 ORTHO05D002833 5.6e-21 104.8 123 41.5
Aa31LG3G3080 Aethionema arabicum HOM05D004904 ORTHO05D002833 1.6e-20 103.2 124 45.2
Aa31LG3G3070 Aethionema arabicum HOM05D004904 ORTHO05D002833 1.8e-19 99.8 113 46.0
Aa31LG3G3210 Aethionema arabicum HOM05D003012 ORTHO05D002833 3.8e-17 92.0 122 39.3
Carub.0004s0236 Capsella rubella HOM05D003012 ORTHO05D002833 4.9e-17 91.7 134 39.6
AT2G23148 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 6.4e-17 91.3 133 39.8
A09p07760 Brassica napus HOM05D004904 ORTHO05D010762 2.4e-16 89.4 134 40.3
BraA09t36424Z Brassica rapa HOM05D004904 ORTHO05D010762 2.4e-16 89.4 134 40.3
Carub.0003s2793 Capsella rubella HOM05D003012 ORTHO05D002833 4.2e-16 88.6 134 38.1
Carub.0007s3746 Capsella rubella HOM05D003012 ORTHO05D002833 1.6e-15 86.7 127 42.5
AL3G43730 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 2.1e-15 86.3 139 37.4
BcaC04g23406 Brassica carinata HOM05D004904 ORTHO05D010762 3.5e-15 85.5 134 38.8
C09p08660 Brassica napus HOM05D004904 ORTHO05D010762 3.5e-15 85.5 134 38.8
BolC9t53777H Brassica oleracea HOM05D004904 ORTHO05D010762 4.6e-15 85.1 134 38.8
AL4G12990 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 7.8e-15 84.3 134 38.1
A03p57360 Brassica napus HOM05D003012 ORTHO05D002833 7.8e-15 84.3 127 41.7
BraA03t14802Z Brassica rapa HOM05D003012 ORTHO05D002833 7.8e-15 84.3 127 41.7
Carub.0003s2720 Capsella rubella HOM05D003012 ORTHO05D002833 7.8e-15 84.3 106 42.5
BcaB08g36803 Brassica carinata HOM05D003012 ORTHO05D002833 1.3e-14 83.6 126 38.9
Thhalv10029508m.g Eutrema salsugineum HOM05D004904 ORTHO05D002833 3.0e-14 82.4 104 46.2
BcaB01g05799 Brassica carinata HOM05D003012 ORTHO05D002833 3.9e-14 82.0 137 40.1
C03p01630 Brassica napus HOM05D003012 ORTHO05D002833 3.9e-14 82.0 137 39.4
BolC2t12283H Brassica oleracea HOM05D004904 ORTHO05D010762 3.9e-14 82.0 137 35.8
Carub.0003s0967 Capsella rubella HOM05D004904 ORTHO05D021430 3.9e-14 82.0 131 42.7
AT2G06090 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 5.1e-14 81.6 132 37.1
A03p25200 Brassica napus HOM05D003012 ORTHO05D002833 5.1e-14 81.6 48 75.0
A10p22270 Brassica napus HOM05D003012 ORTHO05D002833 5.1e-14 81.6 127 38.6
BraA03t11720Z Brassica rapa HOM05D003012 ORTHO05D002833 5.1e-14 81.6 48 75.0
BraA10t44286Z Brassica rapa HOM05D003012 ORTHO05D002833 5.1e-14 81.6 127 38.6
THA.LOC104816435 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 5.1e-14 81.6 132 34.8
C05p59030 Brassica napus HOM05D003012 ORTHO05D002833 6.6e-14 81.3 126 38.9
BolC3t12715H Brassica oleracea HOM05D003012 ORTHO05D002833 6.6e-14 81.3 137 40.1
THA.LOC104816438 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 8.7e-14 80.9 132 35.6
AL4G15572 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 1.1e-13 80.5 133 36.8
Carub.0001s3274 Capsella rubella HOM05D003012 ORTHO05D002833 1.1e-13 80.5 127 42.5
Carub.0007s1290 Capsella rubella HOM05D003012 ORTHO05D002833 1.1e-13 80.5 135 40.7
AL1G49830 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 1.5e-13 80.1 129 39.5
C09p60090 Brassica napus HOM05D003012 ORTHO05D002833 2.5e-13 79.3 126 37.3
BolC9t58844H Brassica oleracea HOM05D003012 ORTHO05D002833 2.5e-13 79.3 126 37.3
Carub.0003s2722 Capsella rubella HOM05D003012 ORTHO05D002833 2.5e-13 79.3 106 39.6
Thhalv10005700m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 2.5e-13 79.3 135 37.0
A02p42370 Brassica napus HOM05D004904 ORTHO05D010762 3.3e-13 79.0 123 35.8
BraA02t09168Z Brassica rapa HOM05D004904 ORTHO05D010762 3.3e-13 79.0 123 35.8
A01p29940 Brassica napus HOM05D003012 ORTHO05D002833 4.3e-13 78.6 127 38.6
BraA01t03124Z Brassica rapa HOM05D003012 ORTHO05D002833 4.3e-13 78.6 127 38.6
Carub.0005s0810 Capsella rubella HOM05D003012 ORTHO05D002833 4.3e-13 78.6 138 39.9
A03p01280 Brassica napus HOM05D003012 ORTHO05D002833 5.6e-13 78.2 137 38.7
A04p29720 Brassica napus HOM05D003012 ORTHO05D002833 5.6e-13 78.2 134 39.6
BraA03t09509Z Brassica rapa HOM05D003012 ORTHO05D002833 5.6e-13 78.2 137 38.7
AL3G43740 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 7.3e-13 77.8 132 35.6
A03p01270 Brassica napus HOM05D003012 ORTHO05D002833 7.3e-13 77.8 138 39.9
BraA04t18436Z Brassica rapa HOM05D003012 ORTHO05D002833 7.3e-13 77.8 134 39.6
CARHR102930 Cardamine hirsuta HOM05D004904 ORTHO05D012993 1.3e-12 77.0 118 39.0
AT2G23142 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 1.6e-12 76.6 135 36.3
AT5G27238 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 1.6e-12 76.6 131 35.9
AT5G38435 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 1.6e-12 76.6 133 39.1
Thhalv10028054m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 1.6e-12 76.6 127 39.4
Aa31LG3G3300 Aethionema arabicum HOM05D003012 ORTHO05D002833 2.1e-12 76.3 58 60.3
Carub.0003s2723 Capsella rubella HOM05D003012 ORTHO05D002833 2.1e-12 76.3 134 37.3
Thhalv10005414m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 2.1e-12 76.3 135 40.7
C03p88180 Brassica napus HOM05D003012 ORTHO05D002833 2.8e-12 75.9 136 37.5
BolC3t21126H Brassica oleracea HOM05D003012 ORTHO05D002833 2.8e-12 75.9 136 37.5
BcaC06g31836 Brassica carinata HOM05D003012 ORTHO05D002833 3.6e-12 75.5 127 38.6
C01p37850 Brassica napus HOM05D003012 ORTHO05D002833 3.6e-12 75.5 127 37.8
BolC1t03746H Brassica oleracea HOM05D003012 ORTHO05D002833 3.6e-12 75.5 127 37.8
Thhalv10005113m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 3.6e-12 75.5 135 37.8
THA.LOC104816681 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 3.6e-12 75.5 129 34.9
AL3G21820 Arabidopsis lyrata HOM05D004904 ORTHO05D021430 4.8e-12 75.1 127 40.2
BcaNung01392 Brassica carinata HOM05D004904 ORTHO05D010762 4.8e-12 75.1 119 37.8
CARHR291870 Cardamine hirsuta HOM05D003012 ORTHO05D002833 4.8e-12 75.1 130 41.5
THA.LOC104816675 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 4.8e-12 75.1 131 36.6
AT5G38440 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 6.2e-12 74.7 129 37.2
BcaB01g05798 Brassica carinata HOM05D003012 ORTHO05D002833 6.2e-12 74.7 137 38.0
CARHR216060 Cardamine hirsuta HOM05D004904 ORTHO05D010762 6.2e-12 74.7 134 35.1
BolC3t12716H Brassica oleracea HOM05D003012 ORTHO05D002833 8.1e-12 74.3 137 38.0
Carub.0007s3224 Capsella rubella HOM05D004904 ORTHO05D010762 8.1e-12 74.3 121 36.4
Thhalv10029254m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 1.1e-11 73.9 133 36.1
Carub.0001s3273 Capsella rubella HOM05D003012 ORTHO05D002833 1.4e-11 73.6 136 41.2
AL7G45630 Arabidopsis lyrata HOM05D002460 ORTHO05D002716 1.8e-11 73.2 117 35.9
AL4G13000 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 3.1e-11 72.4 125 36.8
A10p22280 Brassica napus HOM05D003012 ORTHO05D002833 3.1e-11 72.4 129 38.0
CARHR057800 Cardamine hirsuta HOM05D004904 ORTHO05D010762 3.1e-11 72.4 135 37.0
Carub.0007s3747 Capsella rubella HOM05D003012 ORTHO05D002833 5.3e-11 71.6 128 39.1
AT3G10455 Arabidopsis thaliana HOM05D004904 ORTHO05D021430 6.9e-11 71.2 131 38.2
Carub.0007s3750 Capsella rubella HOM05D003012 ORTHO05D002833 6.9e-11 71.2 111 38.7
CARHR216110 Cardamine hirsuta HOM05D004904 ORTHO05D010762 6.9e-11 71.2 135 34.8
BcaB03g12743 Brassica carinata HOM05D003012 ORTHO05D002833 1.2e-10 70.5 133 36.1
BcaB06g25859 Brassica carinata HOM05D004904 ORTHO05D010762 1.2e-10 70.5 121 34.7
CARHR220080 Cardamine hirsuta HOM05D004904 ORTHO05D012458 1.2e-10 70.5 132 35.6
THA.LOC104816680 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 1.2e-10 70.5 129 34.1
BcaC04g18834 Brassica carinata HOM05D003012 ORTHO05D002833 1.5e-10 70.1 127 36.2
C09p60100 Brassica napus HOM05D003012 ORTHO05D002833 1.5e-10 70.1 127 36.2
BolC9t58845H Brassica oleracea HOM05D003012 ORTHO05D002833 1.5e-10 70.1 127 36.2
CARHR112870 Cardamine hirsuta HOM05D004904 ORTHO05D010762 1.5e-10 70.1 122 36.9
BraA10t44287Z Brassica rapa HOM05D003012 ORTHO05D002833 2.0e-10 69.7 127 36.2
BraA08t33773Z Brassica rapa HOM05D003012 ORTHO05D002833 2.6e-10 69.3 127 36.2
BcaC02g12915 Brassica carinata HOM05D003012 ORTHO05D002833 4.4e-10 68.6 134 38.1
CARHR274150 Cardamine hirsuta HOM05D004904 ORTHO05D012993 5.8e-10 68.2 115 33.9
Carub.0003s2721 Capsella rubella HOM05D003012 ORTHO05D002833 7.6e-10 67.8 128 38.3
BolC3t15789H Brassica oleracea HOM05D004904 ORTHO05D002833 1.3e-09 67.0 74 51.4
Carub.0006s0330 Capsella rubella HOM05D003012 ORTHO05D002833 1.7e-09 66.6 123 37.4
BolC7t43818H Brassica oleracea HOM05D012418 ORTHO05D012993 2.2e-09 66.2 122 36.1
BraA03t09507Z Brassica rapa HOM05D003012 ORTHO05D002833 3.8e-09 65.5 143 36.4
BolC2t11434H Brassica oleracea HOM05D012418 ORTHO05D012993 6.4e-09 64.7 130 30.8
AL2G29420 Arabidopsis lyrata HOM05D004904 ORTHO05D012993 8.4e-09 64.3 148 30.4
BraA02t08507Z Brassica rapa HOM05D012418 ORTHO05D012993 1.1e-08 63.9 129 31.0
AL6G26180 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 1.4e-08 63.5 127 34.6
AT1G09245 Arabidopsis thaliana HOM05D004904 ORTHO05D015396 1.9e-08 63.2 137 35.0
BcaB01g02776 Brassica carinata HOM05D004904 ORTHO05D002833 1.9e-08 63.2 95 35.8
BraA06t27252Z Brassica rapa HOM05D012418 ORTHO05D012993 3.2e-08 62.4 122 33.6
Prupe.1G043900 Prunus persica HOM05D000256 ORTHO05D000119 3.2e-08 62.4 146 33.6
Thhalv10015914m.g Eutrema salsugineum HOM05D003012 ORTHO05D000119 4.2e-08 62.0 116 34.5
THA.LOC104816678 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 4.2e-08 62.0 92 38.0
C04p67000 Brassica napus HOM05D003012 ORTHO05D002833 5.4e-08 61.6 93 39.8
AT5G04350 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 7.1e-08 61.2 128 35.2
PSO421G0627 Papaver somniferum HOM05D000256 ORTHO05D000119 7.1e-08 61.2 131 28.2
Aa31LG11G5250 Aethionema arabicum HOM05D013273 ORTHO05D002833 1.2e-07 60.5 94 37.2
Thhalv10027484m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 1.6e-07 60.1 127 30.7
AL6G13970 Arabidopsis lyrata HOM05D013273 ORTHO05D015812 2.1e-07 59.7 113 32.7
AL6G13980 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 2.7e-07 59.3 119 34.5
A09p64370 Brassica napus HOM05D003012 ORTHO05D002833 2.7e-07 59.3 98 37.8
BraA09t41781Z Brassica rapa HOM05D003012 ORTHO05D002833 2.7e-07 59.3 98 37.8
Carub.0006s0248 Capsella rubella HOM05D003012 ORTHO05D002833 3.5e-07 58.9 139 32.4
Carub.0007s2993 Capsella rubella HOM05D004904 ORTHO05D012993 3.5e-07 58.9 139 36.0
Carub.0007s2995 Capsella rubella HOM05D004904 ORTHO05D012993 3.5e-07 58.9 139 36.0
PSO384G3084 Papaver somniferum HOM05D000256 ORTHO05D000119 4.6e-07 58.5 131 28.2
PSO384G5031 Papaver somniferum HOM05D000256 ORTHO05D000119 4.6e-07 58.5 131 28.2
SalBow4G0147 Salvia bowleyana HOM05D000256 ORTHO05D000119 4.6e-07 58.5 124 34.7
unitig_899.g15052 Utricularia gibba HOM05D000256 ORTHO05D000119 4.6e-07 58.5 141 33.3
BraA09t41444Z Brassica rapa HOM05D004904 ORTHO05D012458 6.0e-07 58.2 115 32.2
Thhalv10002162m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 6.0e-07 58.2 99 38.4
CAN.G884.2 Capsicum annuum HOM05D000256 ORTHO05D000119 1.0e-06 57.4 122 30.3
Thhalv10023144m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 1.0e-06 57.4 112 33.9
CANSAT35G0230 Cannabis sativa HOM05D000256 ORTHO05D000119 1.3e-06 57.0 114 33.3
AL1G59050 Arabidopsis lyrata HOM05D004904 ORTHO05D012458 1.7e-06 56.6 117 34.2
Sopen03g037590 Solanum pennellii HOM05D000256 ORTHO05D000119 5.1e-06 55.1 120 29.2
BcaC07g41762 Brassica carinata HOM05D003012 ORTHO05D002833 6.6e-06 54.7 98 36.7
C08p48000 Brassica napus HOM05D003012 ORTHO05D002833 6.6e-06 54.7 98 36.7
BolC8t52338H Brassica oleracea HOM05D003012 ORTHO05D002833 6.6e-06 54.7 98 36.7
CARHR084970 Cardamine hirsuta HOM05D003012 ORTHO05D002833 6.6e-06 54.7 108 32.4
unitig_899.g15053 Utricularia gibba HOM05D000256 ORTHO05D000119 6.6e-06 54.7 139 29.5


User provided reference genes

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