Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 1.2e-101 373.2 198 100.0
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 3.1e-97 358.6 198 97.0
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 1.7e-95 352.8 198 95.5
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 1.7e-95 352.8 198 95.5
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 2.4e-89 332.4 197 90.9
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 4.4e-88 328.2 199 93.0
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 4.0e-81 305.1 201 87.6
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 9.0e-81 303.9 202 85.6
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 9.0e-81 303.9 202 85.6
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 3.5e-77 292.0 197 86.3
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 1.6e-74 283.1 208 80.3
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 1.4e-73 280.0 204 79.4
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 2.0e-72 276.2 202 80.7
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 4.5e-72 275.0 198 80.3
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 1.7e-71 273.1 204 79.4
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 2.1e-69 266.2 153 94.8
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 1.9e-67 259.6 194 77.8
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 7.9e-61 237.7 193 73.1
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 8.7e-60 234.2 197 71.6
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 2.1e-58 229.6 167 76.0
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 2.4e-57 226.1 199 67.8
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 2.4e-57 226.1 196 64.8
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 2.4e-57 226.1 194 67.5
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 3.1e-57 225.7 197 66.0
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 6.9e-57 224.6 167 74.9
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 6.9e-57 224.6 167 74.9
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 6.9e-57 224.6 199 68.3
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 6.9e-57 224.6 161 74.5
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 9.0e-57 224.2 192 67.7
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 1.0e-55 220.7 168 70.8
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.7e-55 219.9 199 64.3
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.7e-55 219.9 164 75.0
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 2.9e-55 219.2 197 66.5
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 2.9e-55 219.2 199 64.8
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 2.9e-55 219.2 153 75.8
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 3.8e-55 218.8 196 64.8
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 3.8e-55 218.8 185 68.6
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 5.0e-55 218.4 164 72.0
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 6.5e-55 218.0 200 64.5
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 6.5e-55 218.0 200 64.5
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 1.1e-54 217.2 173 69.4
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 1.4e-54 216.9 165 72.1
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.9e-54 216.5 175 70.3
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 1.9e-54 216.5 196 66.3
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 1.9e-54 216.5 167 73.1
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 2.5e-54 216.1 157 73.9
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 3.2e-54 215.7 164 72.6
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 3.2e-54 215.7 180 68.3
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 4.2e-54 215.3 199 65.3
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 4.2e-54 215.3 190 67.4
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 4.2e-54 215.3 199 64.3
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 5.5e-54 214.9 194 64.9
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 5.5e-54 214.9 162 74.7
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 7.2e-54 214.5 164 70.1
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 7.2e-54 214.5 157 73.2
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 9.3e-54 214.2 167 72.5
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 9.3e-54 214.2 167 72.5
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 9.3e-54 214.2 193 64.2
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 1.2e-53 213.8 161 72.0
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.6e-53 213.4 200 63.5
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.6e-53 213.4 167 71.3
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 2.1e-53 213.0 154 75.3
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 2.7e-53 212.6 190 64.2
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 2.7e-53 212.6 196 65.8
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 4.6e-53 211.8 180 68.3
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 4.6e-53 211.8 201 62.2
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 4.6e-53 211.8 191 64.4
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 4.6e-53 211.8 202 61.4
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 4.6e-53 211.8 198 63.6
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 4.6e-53 211.8 158 74.1
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 6.1e-53 211.5 150 76.0
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 7.9e-53 211.1 193 63.2
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 7.9e-53 211.1 199 61.3
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 7.9e-53 211.1 197 62.4
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 1.0e-52 210.7 196 63.3
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 1.0e-52 210.7 199 65.8
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 1.0e-52 210.7 182 66.5
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 1.0e-52 210.7 198 64.1
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.8e-52 209.9 200 64.5
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 1.8e-52 209.9 204 64.2
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 2.3e-52 209.5 196 62.8
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 5.1e-52 208.4 197 63.5
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 6.7e-52 208.0 196 62.2
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.1e-51 207.2 155 74.8
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.1e-51 207.2 197 64.5
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 1.9e-51 206.5 196 62.2
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 3.3e-51 205.7 198 61.6
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 4.3e-51 205.3 172 68.6
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 4.3e-51 205.3 202 61.9
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 7.4e-51 204.5 199 61.8
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 1.6e-50 203.4 172 68.0
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 2.2e-50 203.0 197 65.5
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 2.8e-50 202.6 149 75.8
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 3.7e-50 202.2 157 70.1
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 6.3e-50 201.4 132 80.3
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 8.2e-50 201.1 203 61.1
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 8.2e-50 201.1 162 67.9
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 8.2e-50 201.1 151 72.2
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 1.4e-49 200.3 151 71.5
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 4.1e-49 198.7 197 61.9
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 3.8e-47 192.2 165 65.5
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 3.8e-47 192.2 150 72.0
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 3.2e-46 189.1 161 67.1
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 3.6e-45 185.7 155 66.5
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 1.8e-44 183.3 137 70.8
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 2.3e-44 183.0 153 64.1
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 2.3e-44 183.0 198 58.6
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 1.1e-43 180.6 191 57.6
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 1.3e-42 177.2 153 62.7
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 1.1e-41 174.1 117 81.2
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 1.2e-40 170.6 132 69.7
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 1.2e-40 170.6 119 79.0
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.3e-39 167.2 125 72.8
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 3.8e-39 165.6 121 74.4
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 1.2e-37 160.6 185 51.4
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 3.3e-35 152.5 111 73.9
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 9.7e-35 151.0 141 62.4
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 2.8e-34 149.4 136 57.4
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 9.1e-33 144.4 141 53.9
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 2.6e-32 142.9 88 88.6
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.2e-29 134.0 87 81.6
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 3.6e-29 132.5 91 79.1
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 4.7e-29 132.1 87 80.5
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 4.0e-28 129.0 80 88.8
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 1.6e-24 117.1 92 70.7
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 3.0e-20 102.8 140 49.3
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 7.5e-19 98.2 99 55.6
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 4.1e-17 92.4 63 69.8
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 8.6e-07 58.2 105 35.2


User provided reference genes

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