Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p20110 Brassica napus HOM05D016272 ORTHO05D014853 1.5e-39 165.6 76 100.0
C04p55800 Brassica napus HOM05D016272 ORTHO05D014853 7.5e-36 153.3 76 92.1
A04p20120 Brassica napus HOM05D016272 ORTHO05D014853 4.1e-34 147.5 76 88.2
BolC4t27108H Brassica oleracea HOM05D016272 ORTHO05D014853 5.4e-34 147.1 76 88.2
BolC4t27109H Brassica oleracea HOM05D016272 ORTHO05D014853 5.4e-34 147.1 75 88.0
C04p55820 Brassica napus HOM05D016272 ORTHO05D014853 4.6e-33 144.1 75 86.7
BcaB06g29617 Brassica carinata HOM05D016272 ORTHO05D014853 1.2e-28 129.4 76 77.6
BraA04t17593Z Brassica rapa HOM05D016272 ORTHO05D014853 4.4e-28 127.5 59 100.0
AL5G43440 Arabidopsis lyrata HOM05D007747 ORTHO05D014853 1.2e-12 76.3 74 54.1
Thhalv10017941m.g Eutrema salsugineum HOM05D007747 ORTHO05D014853 5.8e-12 73.9 73 47.9
Carub.0005s2785 Capsella rubella HOM05D007747 ORTHO05D014853 4.9e-11 70.9 73 47.9
Thhalv10029330m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 8.4e-11 70.1 76 42.1
AT3G61182 Arabidopsis thaliana HOM05D007747 ORTHO05D014853 1.9e-10 68.9 77 46.8
BcaB06g28203 Brassica carinata HOM05D007747 ORTHO05D024130 9.2e-10 66.6 76 46.1
Thhalv10003401m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 1.6e-09 65.9 73 46.6
Sp5g02207 Schrenkiella parvula HOM05D007747 ORTHO05D009997 2.7e-09 65.1 76 43.4
Thhalv10006351m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 3.5e-09 64.7 74 40.5
BolC4t24705H Brassica oleracea HOM05D007747 ORTHO05D009997 4.6e-09 64.3 73 39.7
BolC4t23792H Brassica oleracea HOM05D007747 ORTHO05D024130 6.0e-09 63.9 84 42.9
A07p18970 Brassica napus HOM05D007747 ORTHO05D024130 1.3e-08 62.8 84 41.7
BraA07t29602Z Brassica rapa HOM05D007747 ORTHO05D024130 1.3e-08 62.8 84 41.7
C04p22980 Brassica napus HOM05D007747 ORTHO05D024130 1.7e-08 62.4 84 42.9
A04p01250 Brassica napus HOM05D007747 ORTHO05D009997 3.9e-08 61.2 73 38.4
BraA04t15844Z Brassica rapa HOM05D007747 ORTHO05D009997 3.9e-08 61.2 73 38.4
AL5G43420 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 6.6e-08 60.5 74 39.2
BcaB03g15568 Brassica carinata HOM05D007747 ORTHO05D009997 8.7e-08 60.1 74 39.2
AT3G61177 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 1.5e-07 59.3 74 37.8
C08p36030 Brassica napus HOM05D007747 ORTHO05D009997 1.9e-07 58.9 74 44.6
AT3G61175 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 2.5e-07 58.5 76 39.5
CARHR121310 Cardamine hirsuta HOM05D007747 ORTHO05D009997 2.5e-07 58.5 78 41.0
AL5G21430 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 5.6e-07 57.4 74 41.9
BcaC07g40620 Brassica carinata HOM05D007747 ORTHO05D009997 5.6e-07 57.4 74 43.2
AL5G21440 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 9.6e-07 56.6 77 39.0
AL8G18250 Arabidopsis lyrata HOM05D007747 ORTHO05D023629 9.6e-07 56.6 83 41.0
AL8G18260 Arabidopsis lyrata HOM05D007747 ORTHO05D023629 9.6e-07 56.6 83 41.0
CARHR096880 Cardamine hirsuta HOM05D007747 ORTHO05D009997 9.6e-07 56.6 77 36.4
THA.LOC104815826 Tarenaya hassleriana HOM05D013401 ORTHO05D009997 1.2e-06 56.2 71 38.0
A07p30920 Brassica napus HOM05D007747 ORTHO05D009997 1.6e-06 55.8 74 41.9
CARHR101820 Cardamine hirsuta HOM05D007747 ORTHO05D009997 2.1e-06 55.5 74 36.5
AT3G43505 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 3.6e-06 54.7 75 40.0
AL807U10010 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 6.2e-06 53.9 73 39.7
AT3G61172 Arabidopsis thaliana HOM05D009342 ORTHO05D009997 6.2e-06 53.9 68 39.7
Aa31LG10G15250 Aethionema arabicum HOM05D009342 ORTHO05D009997 8.1e-06 53.5 78 39.7
C06p35910 Brassica napus HOM05D007747 ORTHO05D009997 8.1e-06 53.5 75 40.0
Carub.0005s2783 Capsella rubella HOM05D009342 ORTHO05D009997 8.1e-06 53.5 71 39.4
Sp5g02203 Schrenkiella parvula HOM05D009342 ORTHO05D009997 8.1e-06 53.5 75 41.3


User provided reference genes

Program Settings