Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 7.5e-181 637.1 333 100.0
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 3.3e-176 621.7 333 98.5
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 2.1e-175 619.0 333 98.2
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 9.9e-157 557.0 334 88.9
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 9.2e-155 550.4 334 88.3
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 4.4e-149 531.6 336 86.9
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 8.4e-148 527.3 338 86.1
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 7.1e-147 524.2 336 86.0
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 3.3e-136 488.8 355 75.8
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 3.1e-134 482.3 348 79.6
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 6.9e-134 481.1 334 77.5
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 4.2e-123 445.3 331 73.1
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 1.1e-120 437.2 334 72.8
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.5e-120 436.0 335 71.9
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 1.3e-119 433.7 337 71.8
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.1e-118 430.6 325 72.0
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.4e-118 430.3 334 70.1
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.2e-117 427.2 293 76.1
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 2.6e-117 426.0 330 72.4
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 8.5e-116 421.0 323 70.3
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.1e-115 420.6 328 72.0
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 1.4e-115 420.2 324 71.3
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.4e-115 420.2 334 69.2
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 1.9e-115 419.9 261 82.4
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 2.5e-115 419.5 330 69.7
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 9.4e-115 417.5 295 75.3
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 1.2e-114 417.2 293 74.4
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 1.4e-113 413.7 322 69.3
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 2.3e-113 412.9 280 77.1
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 3.9e-113 412.1 321 68.8
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 5.1e-113 411.8 326 69.6
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 3.3e-112 409.1 288 73.6
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 7.4e-112 407.9 329 67.8
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 9.7e-112 407.5 316 69.6
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 9.7e-112 407.5 330 69.7
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.3e-111 407.1 291 73.2
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 2.2e-111 406.4 330 70.6
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 2.8e-111 406.0 297 73.7
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 2.8e-111 406.0 316 69.3
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.8e-111 406.0 330 69.4
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 6.3e-111 404.8 330 69.1
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 1.1e-110 404.1 326 68.7
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.4e-110 403.7 335 66.9
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.4e-110 402.9 333 65.5
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 3.1e-110 402.5 330 68.8
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 6.9e-110 401.4 331 67.4
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 2.0e-109 399.8 315 67.9
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 2.6e-109 399.4 339 64.9
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.6e-109 399.4 331 65.9
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 3.4e-109 399.1 334 66.2
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 3.4e-109 399.1 260 76.2
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 3.4e-109 399.1 328 67.4
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 1.7e-108 396.7 261 76.6
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 2.2e-108 396.4 323 65.3
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 3.8e-108 395.6 333 66.4
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 5.0e-108 395.2 259 78.4
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 5.0e-108 395.2 297 72.1
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.1e-107 394.0 271 74.5
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 1.1e-107 394.0 325 66.2
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 1.1e-107 394.0 327 65.4
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 2.5e-107 392.9 339 63.7
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 5.5e-107 391.7 324 65.1
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 2.7e-106 389.4 261 77.4
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.0e-105 387.5 249 79.1
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.4e-105 387.1 324 64.5
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 3.9e-105 385.6 333 64.6
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 3.9e-105 385.6 332 63.3
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 6.7e-105 384.8 250 80.4
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 2.0e-104 383.3 332 63.6
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 2.6e-104 382.9 322 66.8
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 3.3e-104 382.5 330 65.8
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 3.3e-104 382.5 345 62.9
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 4.4e-104 382.1 263 74.5
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 2.2e-103 379.8 320 65.9
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 2.2e-103 379.8 333 64.0
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 4.8e-103 378.6 296 67.6
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 1.1e-102 377.5 236 80.9
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 2.4e-102 376.3 333 62.5
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 5.3e-102 375.2 325 64.3
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.0e-101 373.2 348 61.5
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 2.0e-101 373.2 331 64.0
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 3.5e-101 372.5 331 65.0
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.1e-99 367.5 238 78.2
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 6.1e-98 361.7 337 61.4
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.1e-94 350.9 250 72.8
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 2.6e-93 346.3 259 68.0
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 3.5e-93 345.9 290 65.2
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.5e-91 339.7 234 72.6
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 5.5e-91 338.6 269 66.2
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 9.4e-91 337.8 329 58.4
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 5.2e-89 332.0 253 72.3
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.0e-88 330.1 221 73.3
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 4.8e-87 325.5 261 66.7
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 2.4e-86 323.2 235 70.2
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 3.1e-86 322.8 333 57.1
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 1.3e-79 300.8 216 65.7
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 1.4e-78 297.4 259 64.5
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.8e-78 297.0 219 72.1
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 1.1e-75 287.7 260 56.2
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.1e-74 283.5 188 78.2
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 6.1e-74 282.0 260 55.8
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 4.4e-72 275.8 264 53.4
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 7.8e-69 265.0 258 59.7
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.4e-64 249.2 251 52.6
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 6.4e-63 245.4 263 49.4
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 2.3e-60 236.9 280 48.6
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.3e-59 232.6 249 52.6
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 8.0e-58 228.4 253 49.0
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.5e-53 213.0 129 83.7
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.8e-49 200.7 251 42.6
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 1.0e-44 184.9 244 44.7
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 5.1e-44 182.6 170 64.7
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 1.2e-40 171.4 246 39.4
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 7.1e-38 162.2 125 68.8
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 6.9e-25 119.0 244 30.3
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 1.2e-21 108.2 288 34.0
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 6.7e-20 102.4 253 31.6
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 1.9e-06 57.8 32 93.8
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 9.3e-06 55.5 52 51.9


User provided reference genes

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