Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p18490 Brassica napus HOM05D003869 ORTHO05D004718 1.7e-156 555.8 262 100.0
BcaC02g08489 Brassica carinata HOM05D003869 ORTHO05D004718 1.5e-123 446.4 377 63.9
C04p53760 Brassica napus HOM05D003869 ORTHO05D004718 1.5e-123 446.4 377 63.9
BolC4t26931H Brassica oleracea HOM05D003869 ORTHO05D004718 8.1e-122 440.7 377 63.4
CARHR116870 Cardamine hirsuta HOM05D003869 ORTHO05D004718 7.2e-78 294.7 376 45.7
Thhalv10000166m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 5.2e-76 288.5 380 44.5
Carub.0004s0433 Capsella rubella HOM05D003869 ORTHO05D004718 4.4e-75 285.4 374 45.2
Thhalv10000198m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 4.4e-75 285.4 374 45.2
Sp4g03220 Schrenkiella parvula HOM05D003869 ORTHO05D004718 4.1e-73 278.9 362 45.0
Thhalv10000199m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 2.0e-72 276.6 376 43.4
AT1G64840 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 5.9e-72 275.0 375 43.5
BcaB06g28002 Brassica carinata HOM05D003869 ORTHO05D004718 5.9e-72 275.0 370 43.2
A04p19090 Brassica napus HOM05D003869 ORTHO05D004718 5.9e-72 275.0 372 41.1
Carub.0004s0426 Capsella rubella HOM05D003869 ORTHO05D004718 1.0e-71 274.2 370 43.2
AL4G14520 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.9e-71 272.7 363 45.7
AL4G15620 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 5.0e-71 271.9 380 44.5
Sp4g03230 Schrenkiella parvula HOM05D003869 ORTHO05D004718 5.0e-71 271.9 378 42.9
Carub.0004s0429 Capsella rubella HOM05D003869 ORTHO05D004718 8.5e-71 271.2 369 42.3
BcaB06g27998 Brassica carinata HOM05D003869 ORTHO05D004718 1.1e-70 270.8 367 42.0
Carub.0004s0353 Capsella rubella HOM05D003869 ORTHO05D004718 1.1e-70 270.8 375 43.5
AL4G18550 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 1.9e-70 270.0 377 43.0
AL4G18540 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 4.2e-70 268.9 379 42.7
Carub.0004s0432 Capsella rubella HOM05D003869 ORTHO05D004718 4.2e-70 268.9 376 42.0
AL4G18480 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 5.5e-70 268.5 372 41.4
AL4G15660 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 7.2e-70 268.1 372 42.2
AL4G18560 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 9.4e-70 267.7 374 40.9
BraA04t17507Z Brassica rapa HOM05D003869 ORTHO05D004718 2.1e-69 266.5 372 40.3
AL4G18510 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.7e-69 266.2 373 41.6
BcaC02g08420 Brassica carinata HOM05D003869 ORTHO05D004718 4.7e-69 265.4 342 46.2
Carub.0004s0427 Capsella rubella HOM05D003869 ORTHO05D004718 6.1e-69 265.0 382 41.6
AL4G15500 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 1.8e-68 263.5 383 42.0
C04p54430 Brassica napus HOM05D003869 ORTHO05D004718 2.3e-68 263.1 372 42.2
BolC4t26932H Brassica oleracea HOM05D003869 ORTHO05D004718 8.8e-68 261.2 380 42.1
BcaB06g28005 Brassica carinata HOM05D003869 ORTHO05D004718 1.5e-67 260.4 334 47.6
Carub.0004s0420 Capsella rubella HOM05D003869 ORTHO05D004718 1.5e-67 260.4 373 40.5
Carub.0004s0422 Capsella rubella HOM05D003869 ORTHO05D004718 1.5e-67 260.4 375 40.5
BolC4t26933H Brassica oleracea HOM05D003869 ORTHO05D004718 2.0e-67 260.0 381 43.0
CARHR117020 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.4e-65 253.1 380 40.5
A04p18510 Brassica napus HOM05D003869 ORTHO05D004718 3.1e-65 252.7 314 48.4
CARHR116990 Cardamine hirsuta HOM05D003869 ORTHO05D004718 3.1e-65 252.7 372 42.7
BraA04t17463Z Brassica rapa HOM05D003869 ORTHO05D004718 4.1e-65 252.3 379 42.2
AL4G14510 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 4.5e-64 248.8 367 41.1
BcaC02g08487 Brassica carinata HOM05D003869 ORTHO05D004718 7.7e-64 248.1 309 47.2
C04p53780 Brassica napus HOM05D003869 ORTHO05D004718 1.0e-63 247.7 381 41.7
Carub.0004s0423 Capsella rubella HOM05D003869 ORTHO05D004718 1.7e-63 246.9 382 41.1
BolC4t26993H Brassica oleracea HOM05D003869 ORTHO05D004718 3.8e-63 245.7 391 40.9
A04p18540 Brassica napus HOM05D003869 ORTHO05D004718 1.5e-62 243.8 382 40.3
BraA04t17462Z Brassica rapa HOM05D003869 ORTHO05D004718 1.5e-62 243.8 382 40.3
BcaC02g08486 Brassica carinata HOM05D003869 ORTHO05D004718 3.2e-62 242.7 382 41.6
AT2G24250 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 5.5e-62 241.9 369 41.7
CARHR118620 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.8e-60 236.9 351 40.2
BcaB06g28007 Brassica carinata HOM05D003869 ORTHO05D004718 4.0e-60 235.7 378 38.4
C04p54420 Brassica napus HOM05D003869 ORTHO05D004718 6.8e-60 235.0 272 47.1
BcaC02g08419 Brassica carinata HOM05D003869 ORTHO05D004718 3.4e-59 232.6 283 46.6
BolC4t26992H Brassica oleracea HOM05D003869 ORTHO05D004718 3.4e-59 232.6 283 46.6
CARHR116940 Cardamine hirsuta HOM05D003869 ORTHO05D004718 3.4e-59 232.6 334 44.3
BcaC02g08418 Brassica carinata HOM05D003869 ORTHO05D004718 1.3e-58 230.7 369 41.2
A04p19110 Brassica napus HOM05D003869 ORTHO05D004718 1.3e-58 230.7 369 41.2
C04p54480 Brassica napus HOM05D003869 ORTHO05D004718 1.3e-58 230.7 345 42.3
BraA04t17509Z Brassica rapa HOM05D003869 ORTHO05D004718 1.3e-58 230.7 369 41.2
A04p19130 Brassica napus HOM05D003869 ORTHO05D004718 4.8e-58 228.8 388 38.9
Carub.0004s0430 Capsella rubella HOM05D003869 ORTHO05D004718 1.1e-57 227.6 368 40.5
A04p19140 Brassica napus HOM05D003869 ORTHO05D004718 2.4e-57 226.5 388 38.9
BcaB06g28006 Brassica carinata HOM05D003869 ORTHO05D004718 4.1e-57 225.7 371 39.9
A04p19120 Brassica napus HOM05D003869 ORTHO05D004718 4.1e-57 225.7 358 39.7
C04p54520 Brassica napus HOM05D003869 ORTHO05D004718 5.4e-57 225.3 385 37.9
BraA04t17514Z Brassica rapa HOM05D003869 ORTHO05D004718 9.1e-57 224.6 388 38.7
BcaC02g08414 Brassica carinata HOM05D003869 ORTHO05D004718 1.7e-55 220.3 385 38.2
BolC4t26995H Brassica oleracea HOM05D003869 ORTHO05D004718 1.7e-55 220.3 385 38.2
Thhalv10000460m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 1.9e-54 216.9 334 41.9
AL4G15555 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.3e-54 216.1 307 41.7
BcaB01g02713 Brassica carinata HOM05D003869 ORTHO05D004718 3.3e-54 216.1 376 37.0
BraA04t17506Z Brassica rapa HOM05D003869 ORTHO05D004718 4.7e-53 212.2 363 36.4
AL4G18500 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 6.1e-53 211.8 275 45.5
A04p19070 Brassica napus HOM05D003869 ORTHO05D004718 8.0e-53 211.5 363 36.1
BolC4t26987H Brassica oleracea HOM05D003869 ORTHO05D004718 4.0e-52 209.1 366 36.9
BcaC02g08422 Brassica carinata HOM05D003869 ORTHO05D004718 5.2e-52 208.8 366 37.2
C04p54410 Brassica napus HOM05D003869 ORTHO05D004718 5.2e-52 208.8 366 37.2
Thhalv10000613m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 1.2e-51 207.6 362 34.0
AL4G15530 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 5.7e-51 205.3 262 45.0
BcaC02g08416 Brassica carinata HOM05D003869 ORTHO05D004718 2.8e-50 203.0 376 37.5
Carub.0004s0354 Capsella rubella HOM05D003869 ORTHO05D004718 9.2e-49 198.0 364 36.8
Sp4g03710 Schrenkiella parvula HOM05D003869 ORTHO05D004718 1.7e-47 193.7 330 35.8
CARHR117030 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.9e-47 193.0 319 37.0
C03p32370 Brassica napus HOM05D003869 ORTHO05D004718 4.3e-46 189.1 360 34.2
Thhalv10000175m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 5.6e-46 188.7 364 33.8
BraA03t11909Z Brassica rapa HOM05D003869 ORTHO05D004718 2.8e-45 186.4 360 33.1
A03p26980 Brassica napus HOM05D003869 ORTHO05D004718 4.7e-45 185.7 360 33.3
AL4G15600 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 8.0e-45 184.9 199 52.3
A06p40890 Brassica napus HOM05D003869 ORTHO05D004718 2.3e-44 183.3 359 34.3
BraA06t27011Z Brassica rapa HOM05D003869 ORTHO05D004718 2.3e-44 183.3 359 34.3
C04p54500 Brassica napus HOM05D003869 ORTHO05D004718 7.5e-43 178.3 253 43.1
C07p36960 Brassica napus HOM05D003869 ORTHO05D004718 7.5e-43 178.3 359 33.7
BolC7t44209H Brassica oleracea HOM05D003869 ORTHO05D004718 7.5e-43 178.3 359 33.7
A04p19100 Brassica napus HOM05D003869 ORTHO05D004718 9.8e-43 177.9 260 42.7
C04p53770 Brassica napus HOM05D003869 ORTHO05D004718 9.8e-43 177.9 296 39.5
Thhalv10019678m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 3.2e-41 172.9 367 34.3
BcaB01g02998 Brassica carinata HOM05D003869 ORTHO05D004718 4.1e-41 172.6 363 32.2
CARHR116880 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.7e-39 167.2 311 35.0
Thhalv10000675m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 1.7e-39 167.2 218 41.7
BcaC06g33784 Brassica carinata HOM05D003869 ORTHO05D004718 4.3e-38 162.5 324 34.3
BcaB06g28001 Brassica carinata HOM05D003869 ORTHO05D004718 9.5e-38 161.4 211 42.7
BraA04t17464Z Brassica rapa HOM05D003869 ORTHO05D004718 1.2e-37 161.0 258 39.5
BraA04t17513Z Brassica rapa HOM05D003869 ORTHO05D004718 1.2e-37 161.0 253 40.3
Carub.0004s0352 Capsella rubella HOM05D003869 ORTHO05D004718 1.6e-37 160.6 247 40.9
CARHR117230 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.4e-36 157.5 309 34.3
AL4G19670 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 2.3e-36 156.8 99 74.7
Thhalv10000192m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 2.2e-34 150.2 385 31.4
BcaC02g08421 Brassica carinata HOM05D003869 ORTHO05D004718 1.1e-33 147.9 209 40.7
AL4G18570 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.2e-33 146.4 209 44.0
BolC4t26990H Brassica oleracea HOM05D003869 ORTHO05D004718 4.1e-33 146.0 210 40.0
C04p54490 Brassica napus HOM05D003869 ORTHO05D004718 5.4e-33 145.6 206 43.7
CARHR116720 Cardamine hirsuta HOM05D003869 ORTHO05D004718 8.6e-31 138.3 121 56.2
AL4G14530 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 4.3e-30 136.0 211 39.3
AL4G18490 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 7.3e-30 135.2 203 43.3
A04p18500 Brassica napus HOM05D003869 ORTHO05D004718 9.5e-30 134.8 210 41.4
CARHR117220 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.4e-28 131.0 177 43.5
CARHR116700 Cardamine hirsuta HOM05D003869 ORTHO05D004718 3.4e-27 126.3 95 64.2
CARHR117860 Cardamine hirsuta HOM05D003869 ORTHO05D004718 4.4e-27 125.9 226 35.8
BraA04t17508Z Brassica rapa HOM05D003869 ORTHO05D004718 3.7e-26 122.9 210 38.1
BcaC02g08488 Brassica carinata HOM05D003869 ORTHO05D004718 1.2e-24 117.9 141 46.1
AL4G14540 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.0e-23 113.2 239 33.9
Carub.0004s0356 Capsella rubella HOM05D003869 ORTHO05D004718 3.0e-23 113.2 101 56.4
Carub.0004s0424 Capsella rubella HOM05D003869 ORTHO05D004718 1.9e-22 110.5 208 34.6
Carub.0004s0357 Capsella rubella HOM05D003869 ORTHO05D004718 1.2e-21 107.8 207 36.7
AT2G24255 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 1.6e-21 107.5 311 30.5
AL4G15560 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.4e-17 93.6 64 68.8
CARHR116980 Cardamine hirsuta HOM05D003869 ORTHO05D004718 4.6e-16 89.4 74 59.5
CARHR116960 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.3e-15 87.0 187 32.1
CARHR117880 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.5e-14 83.6 68 63.2
BraA04t17461Z Brassica rapa HOM05D003869 ORTHO05D004718 7.3e-14 82.0 35 97.1
BcaC04g23024 Brassica carinata HOM05D003869 ORTHO05D004718 8.1e-13 78.6 300 25.7
CARHR117870 Cardamine hirsuta HOM05D003869 ORTHO05D004718 8.1e-13 78.6 86 51.2
Sp3g29510 Schrenkiella parvula HOM05D003869 ORTHO05D004718 1.4e-12 77.8 288 28.5
Carub.0006s2176 Capsella rubella HOM05D000151 ORTHO05D011749 2.4e-12 77.0 360 24.4
CARHR117890 Cardamine hirsuta HOM05D003869 ORTHO05D004718 3.1e-12 76.6 65 56.9
Sp3g29520 Schrenkiella parvula HOM05D003869 ORTHO05D004718 5.3e-12 75.9 328 25.0
CARHR116910 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.2e-11 74.7 71 52.1
AT5G24040 Arabidopsis thaliana HOM05D000151 ORTHO05D011749 5.8e-11 72.4 331 24.2
THA.LOC104821381 Tarenaya hassleriana HOM05D000151 ORTHO05D011749 5.8e-11 72.4 332 24.1
A09p10960 Brassica napus HOM05D003869 ORTHO05D004718 7.6e-11 72.0 213 28.6
C09p12940 Brassica napus HOM05D003869 ORTHO05D004718 9.9e-11 71.6 319 24.8
BolC9t54185H Brassica oleracea HOM05D003869 ORTHO05D004718 9.9e-11 71.6 319 24.8
AL6G35370 Arabidopsis lyrata HOM05D000151 ORTHO05D011749 1.3e-10 71.2 377 23.3
CARHR053970 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.3e-10 71.2 331 24.8
Eucgr.I01470 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.7e-10 70.9 332 23.2
Thhalv10023062m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 2.2e-10 70.5 208 29.8
BcaB07g31773 Brassica carinata HOM05D003869 ORTHO05D004718 2.9e-10 70.1 330 24.2
BraA09t36735Z Brassica rapa HOM05D003869 ORTHO05D004718 3.8e-10 69.7 192 29.2
BcaC04g23026 Brassica carinata HOM05D003869 ORTHO05D004718 1.4e-09 67.8 214 28.5
C09p12950 Brassica napus HOM05D003869 ORTHO05D004718 1.4e-09 67.8 216 27.8
BolC9t54184H Brassica oleracea HOM05D003869 ORTHO05D004718 1.4e-09 67.8 214 28.5
BolC9t54186H Brassica oleracea HOM05D003869 ORTHO05D004718 1.4e-09 67.8 216 27.8
C09p12930 Brassica napus HOM05D003869 ORTHO05D004718 1.9e-09 67.4 214 28.5
Carub.0006s2177 Capsella rubella HOM05D000151 ORTHO05D011749 7.1e-09 65.5 328 23.5
CARHR116710 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.7e-08 63.5 43 62.8
CARHR116970 Cardamine hirsuta HOM05D003869 ORTHO05D004718 4.6e-08 62.8 48 60.4
BcaC04g23023 Brassica carinata HOM05D003869 ORTHO05D004718 7.8e-08 62.0 211 27.5
BolC4t26989H Brassica oleracea HOM05D003869 ORTHO05D004718 7.8e-08 62.0 40 60.0
Eucgr.I01468 Eucalyptus grandis HOM05D000151 ORTHO05D000074 7.8e-08 62.0 329 23.1
A09p10950 Brassica napus HOM05D003869 ORTHO05D004718 1.0e-07 61.6 210 28.1
BraA04t17512Z Brassica rapa HOM05D003869 ORTHO05D004718 1.7e-07 60.8 40 67.5
Sp2g23270 Schrenkiella parvula HOM05D000151 ORTHO05D011749 3.9e-07 59.7 341 24.6


User provided reference genes

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