Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p17680 Brassica napus HOM05D005883 ORTHO05D033605 1.9e-62 242.3 115 100.0
BraA04t17387Z Brassica rapa HOM05D005883 ORTHO05D033605 1.2e-61 239.6 115 99.1
C04p52440 Brassica napus HOM05D005883 ORTHO05D007682 7.1e-30 134.0 77 87.0
C04p52460 Brassica napus HOM05D005883 ORTHO05D033605 7.1e-30 134.0 77 87.0
C04p52420 Brassica napus HOM05D005883 ORTHO05D007682 6.0e-29 131.0 77 85.7
AT2G23093 Arabidopsis thaliana HOM05D005883 ORTHO05D007682 5.3e-25 117.9 75 80.0
CARHR114450 Cardamine hirsuta HOM05D005883 ORTHO05D007682 5.3e-25 117.9 75 78.7
AL4G12930 Arabidopsis lyrata HOM05D005883 ORTHO05D007682 6.9e-25 117.5 75 78.7
Carub.0004s0230 Capsella rubella HOM05D005883 ORTHO05D007682 9.0e-25 117.1 75 78.7
Sp4g02120 Schrenkiella parvula HOM05D005883 ORTHO05D007682 2.0e-24 115.9 75 78.7
Thhalv10000163m.g Eutrema salsugineum HOM05D005883 ORTHO05D007682 4.5e-24 114.8 75 77.3
BcaC07g41008 Brassica carinata HOM05D005883 ORTHO05D007682 1.0e-23 113.6 75 76.0
A09p57100 Brassica napus HOM05D005883 ORTHO05D007682 1.0e-23 113.6 75 76.0
BolC8t51582H Brassica oleracea HOM05D005883 ORTHO05D007682 1.0e-23 113.6 75 76.0
BraA09t41102Z Brassica rapa HOM05D005883 ORTHO05D007682 1.0e-23 113.6 75 76.0
Aa31LG7G13800 Aethionema arabicum HOM05D005883 ORTHO05D007682 2.9e-23 112.1 75 74.7
C08p40120 Brassica napus HOM05D005883 ORTHO05D007682 4.2e-22 108.2 75 73.3
THA.LOC104804202 Tarenaya hassleriana HOM05D005883 ORTHO05D007682 2.7e-21 105.5 86 62.8
THA.LOC104807620 Tarenaya hassleriana HOM05D005883 ORTHO05D007682 5.7e-19 97.8 75 66.7
Atru.chr3.169 Acer truncatum HOM05D005883 ORTHO05D007682 1.3e-18 96.7 75 64.0
Atru.chr3.198 Acer truncatum HOM05D005883 ORTHO05D007682 1.3e-18 96.7 75 64.0
FAN19G1709 Fragaria x ananassa HOM05D005883 ORTHO05D007682 1.3e-18 96.7 74 66.2
FAN23G0164 Fragaria x ananassa HOM05D005883 ORTHO05D007682 1.3e-18 96.7 74 66.2
RcHm_v2.0_Chr2g0107371 Rosa chinensis HOM05D005883 ORTHO05D007682 2.8e-18 95.5 74 64.9
FAN28G1490 Fragaria x ananassa HOM05D005883 ORTHO05D007682 3.7e-18 95.1 74 63.5
MD15G1293400 Malus domestica HOM05D005883 ORTHO05D007682 3.7e-18 95.1 74 66.2
MD02G1182200 Malus domestica HOM05D005883 ORTHO05D007682 8.2e-18 94.0 74 66.2
Potri.007G052700 Populus trichocarpa HOM05D005883 ORTHO05D007682 1.1e-17 93.6 75 58.7
TWI09G1323 Tripterygium wilfordii HOM05D005883 ORTHO05D007682 1.4e-17 93.2 75 62.7
CSS0036151 Camellia sinensis var. sinensis HOM05D005883 ORTHO05D007682 1.8e-17 92.8 75 61.3
CSS0047219 Camellia sinensis var. sinensis HOM05D005883 ORTHO05D007682 1.8e-17 92.8 75 61.3
Prupe.6G224200 Prunus persica HOM05D005883 ORTHO05D007682 1.8e-17 92.8 74 62.2
Dinv30066 Davidia involucrata HOM05D005883 ORTHO05D007682 2.4e-17 92.4 124 44.4
Actinidia11997 Actinidia chinensis HOM05D005883 ORTHO05D007682 4.1e-17 91.7 75 58.7
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 9.0e-17 90.5 79 62.0
Manes.12G111900 Manihot esculenta HOM05D005883 ORTHO05D007682 1.5e-16 89.7 75 61.3
CiPaw.01G007400 Carya illinoinensis HOM05D005883 ORTHO05D007682 2.0e-16 89.4 74 59.5
Lj2g0016940 Lotus japonicus HOM05D005883 ORTHO05D007682 2.0e-16 89.4 74 62.2
Rhsim10G0103900 Rhododendron simsii HOM05D005883 ORTHO05D007682 2.0e-16 89.4 75 60.0
Actinidia36443 Actinidia chinensis HOM05D005883 ORTHO05D007682 2.6e-16 89.0 75 58.7
Medtr5g016080 Medicago truncatula HOM05D005883 ORTHO05D007682 3.4e-16 88.6 100 51.0
Sabra07G0046300 Salix brachista HOM05D005883 ORTHO05D007682 3.4e-16 88.6 75 56.0
TPR.G20942 Trifolium pratense HOM05D005883 ORTHO05D007682 4.5e-16 88.2 74 59.5
Cpa.g.sc6.49 Carica papaya HOM05D005883 ORTHO05D007682 5.9e-16 87.8 78 59.0
Psat2g170240 Pisum sativum HOM05D005883 ORTHO05D007682 5.9e-16 87.8 74 60.8
HanXRQChr12g0376921 Helianthus annuus HOM05D005883 ORTHO05D007682 7.7e-16 87.4 75 58.7
Ciclev10025596m.g Citrus clementina HOM05D005883 ORTHO05D007682 1.0e-15 87.0 75 57.3
Haze_15313 Corylus avellana HOM05D005883 ORTHO05D007682 1.0e-15 87.0 74 59.5
MELO3C007612.2 Cucumis melo HOM05D005883 ORTHO05D007682 1.0e-15 87.0 74 59.5
Glyma.11G050300 Glycine max HOM05D005883 ORTHO05D007682 1.3e-15 86.7 74 59.5
Lalb_Chr09g0323471 Lupinus albus HOM05D005883 ORTHO05D007682 1.3e-15 86.7 74 58.1
AUR62040273 Chenopodium quinoa HOM05D005883 ORTHO05D007682 1.7e-15 86.3 74 55.4
vmacro05385 Vaccinium macrocarpon HOM05D005883 ORTHO05D007682 1.7e-15 86.3 75 57.3
VMungo1215G0629 Vigna mungo HOM05D005883 ORTHO05D007682 1.7e-15 86.3 74 59.5
Cfa004098 Carpinus fangiana HOM05D005883 ORTHO05D007682 2.2e-15 85.9 74 58.1
Glyma.01G191800 Glycine max HOM05D005883 ORTHO05D007682 2.2e-15 85.9 74 59.5
Lalb_Chr16g0378771 Lupinus albus HOM05D005883 ORTHO05D007682 2.9e-15 85.5 74 58.1
CsaV3_6G043870 Cucumis sativus L. HOM05D005883 ORTHO05D007682 3.8e-15 85.1 74 56.8
Nn1g04621 Nelumbo nucifera HOM05D005883 ORTHO05D007682 5.0e-15 84.7 75 56.0
Nitab4.5_0009137g0020 Nicotiana tabacum HOM05D005883 ORTHO05D007682 5.0e-15 84.7 74 58.1
ClCG01G017340 Citrullus lanatus HOM05D005883 ORTHO05D007682 6.5e-15 84.3 74 55.4
Dinv26902 Davidia involucrata HOM05D005883 ORTHO05D007682 8.5e-15 84.0 75 53.3
Sed0006936 Sechium edule HOM05D005883 ORTHO05D007682 8.5e-15 84.0 74 55.4
Lsat_1_v5_gn_3_88140 Lactuca sativa HOM05D005883 ORTHO05D007682 1.1e-14 83.6 74 54.1
Phvul.002G013100 Phaseolus vulgaris HOM05D005883 ORTHO05D007682 1.4e-14 83.2 74 56.8
CSS0008300 Camellia sinensis var. sinensis HOM05D005883 ORTHO05D007682 1.9e-14 82.8 75 54.7
Oeu040596.1 Olea europaea HOM05D005883 ORTHO05D007682 1.9e-14 82.8 74 55.4
Sc18g0004330 Simmondsia chinensis HOM05D005883 ORTHO05D007682 1.9e-14 82.8 74 58.1
CSS0038059 Camellia sinensis var. sinensis HOM05D005883 ORTHO05D007682 2.5e-14 82.4 75 54.7
Lj7A87T53 Lonicera japonica HOM05D005883 ORTHO05D007682 2.5e-14 82.4 74 56.8
Peaxi162Scf01526g00016 Petunia axillaris HOM05D005883 ORTHO05D007682 2.5e-14 82.4 74 56.8
AUR62003972 Chenopodium quinoa HOM05D005883 ORTHO05D007682 3.2e-14 82.0 74 51.4
Ah.02g125640 Amaranthus hybridus HOM05D005883 ORTHO05D007682 5.5e-14 81.3 75 52.0
arahy.Tifrunner.gnm1.ann1.L7VX2V Arachis hypogaea HOM05D005883 ORTHO05D007682 5.5e-14 81.3 74 56.8
COL.COLO4_11536 Corchorus olitorius HOM05D005883 ORTHO05D007682 5.5e-14 81.3 74 56.8
Hund16381 Selenicereus undatus HOM05D005883 ORTHO05D007682 5.5e-14 81.3 92 46.7
DCAR_025777 Daucus carota HOM05D005883 ORTHO05D007682 9.4e-14 80.5 75 53.3
ECA246G3130 Erigeron canadensis HOM05D005883 ORTHO05D007682 9.4e-14 80.5 75 53.3
MSTRG.2834 Avicennia marina HOM05D005883 ORTHO05D007682 2.1e-13 79.3 74 52.7
Cc07_g06800 Coffea canephora HOM05D005883 ORTHO05D007682 2.1e-13 79.3 73 53.4
Nn5g30515 Nelumbo nucifera HOM05D005883 ORTHO05D007682 3.6e-13 78.6 75 53.3
Eucgr.E01100 Eucalyptus grandis HOM05D005883 ORTHO05D007682 1.0e-12 77.0 74 50.0
Migut.L00197 Erythranthe guttata HOM05D005883 ORTHO05D007682 1.4e-12 76.6 74 50.0
EL10Ac6g15655 Beta vulgaris HOM05D005883 ORTHO05D007682 2.3e-12 75.9 74 54.1
Eucgr.I00721 Eucalyptus grandis HOM05D005883 ORTHO05D007682 2.3e-12 75.9 74 50.0
Nitab4.5_0010920g0010 Nicotiana tabacum HOM05D005883 ORTHO05D007682 2.3e-12 75.9 74 54.1
Thecc.01G068700 Theobroma cacao HOM05D005883 ORTHO05D007682 2.3e-12 75.9 92 48.9
Aqoxy6G02739 Aquilegia oxysepala HOM05D005883 ORTHO05D007682 3.0e-12 75.5 74 48.6
PSO675G6665 Papaver somniferum HOM05D005883 ORTHO05D007682 3.0e-12 75.5 75 53.3
TAR625G0402 Trochodendron aralioides HOM05D005883 ORTHO05D007682 3.0e-12 75.5 74 48.6
Duzib187G0578 Durio zibethinus HOM05D005883 ORTHO05D007682 3.9e-12 75.1 74 54.1
GSVIVG01000152001 Vitis vinifera HOM05D005883 ORTHO05D007682 3.9e-12 75.1 74 54.1
Duzib147G0265 Durio zibethinus HOM05D005883 ORTHO05D007682 5.1e-12 74.7 74 52.7
SGA_v2.0_scaffold13G06475 Striga asiatica HOM05D005883 ORTHO05D007682 5.1e-12 74.7 74 50.0
PSO541G2663 Papaver somniferum HOM05D005883 ORTHO05D007682 6.7e-12 74.3 75 52.0
Peaxi162Scf00264g00325 Petunia axillaris HOM05D005883 ORTHO05D007682 6.7e-12 74.3 74 54.1
CANSAT01G1476 Cannabis sativa HOM05D005883 ORTHO05D007682 8.8e-12 73.9 74 52.7
TAR381G0554 Trochodendron aralioides HOM05D005883 ORTHO05D007682 8.8e-12 73.9 70 51.4
Gohir.D11G206200 Gossypium hirsutum HOM05D005883 ORTHO05D007682 1.5e-11 73.2 78 50.0
ATR0810G056 Amborella trichopoda HOM05D005883 ORTHO05D007682 2.0e-11 72.8 74 45.9
Gohir.A12G074700 Gossypium hirsutum HOM05D005883 ORTHO05D007682 2.0e-11 72.8 74 52.7
Gorai.007G221400 Gossypium raimondii HOM05D005883 ORTHO05D007682 2.0e-11 72.8 78 50.0
Nitab4.5_0001119g0030 Nicotiana tabacum HOM05D005883 ORTHO05D007682 2.5e-11 72.4 74 51.4
CAN.G1075.14 Capsicum annuum HOM05D005883 ORTHO05D007682 4.3e-11 71.6 74 51.4
Gohir.D12G072900 Gossypium hirsutum HOM05D005883 ORTHO05D007682 7.4e-11 70.9 74 51.4
SalBow5G5022 Salvia bowleyana HOM05D005883 ORTHO05D007682 7.4e-11 70.9 74 50.0
unitig_46.g18307 Utricularia gibba HOM05D005883 ORTHO05D007682 9.7e-11 70.5 74 48.6
Gorai.008G080200 Gossypium raimondii HOM05D005883 ORTHO05D007682 2.2e-10 69.3 74 50.0
PGSC0003DMG400024940 Solanum tuberosum HOM05D005883 ORTHO05D007682 2.2e-10 69.3 74 51.4
Gohir.A11G217100 Gossypium hirsutum HOM05D005883 ORTHO05D007682 2.8e-10 68.9 74 48.6
Sopen02g037210 Solanum pennellii HOM05D005883 ORTHO05D007682 2.8e-10 68.9 74 51.4
HPP92_001545 Vanilla planifolia HOM05D005883 ORTHO05D007682 2.8e-10 68.9 77 53.2
Solyc02g092660.3 Solanum lycopersicum HOM05D005883 ORTHO05D007682 3.7e-10 68.6 74 50.0
arahy.Tifrunner.gnm1.ann1.07YYGV Arachis hypogaea HOM05D005883 ORTHO05D007682 4.8e-10 68.2 56 62.5
arahy.Tifrunner.gnm1.ann1.R8KG7J Arachis hypogaea HOM05D005883 ORTHO05D007682 8.2e-10 67.4 56 60.7
arahy.Tifrunner.gnm1.ann1.6C4QPH Arachis hypogaea HOM05D005883 ORTHO05D007682 1.8e-09 66.2 57 59.6
Os08g0113800 Oryza sativa ssp. japonica HOM05D005883 ORTHO05D007682 1.2e-08 63.5 74 44.6
Zm00001eb173940 Zea mays HOM05D005883 ORTHO05D007682 2.2e-07 59.3 74 43.2
SEGI_20032 Sequoiadendron giganteum HOM05D005883 ORTHO05D007682 5.0e-07 58.2 74 40.5
HPP92_020944 Vanilla planifolia HOM05D005883 ORTHO05D007682 8.5e-07 57.4 77 44.2


User provided reference genes

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