Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p17430 Brassica napus HOM05D001756 ORTHO05D001581 1.1e-40 169.5 86 100.0
BraA04t17366Z Brassica rapa HOM05D001756 ORTHO05D001581 1.1e-40 169.5 86 100.0
C04p52190 Brassica napus HOM05D001756 ORTHO05D001581 6.3e-39 163.7 86 96.5
BcaC02g08589 Brassica carinata HOM05D001756 ORTHO05D001581 2.4e-38 161.8 86 95.3
BolC4t26796H Brassica oleracea HOM05D001756 ORTHO05D001581 2.4e-38 161.8 86 95.3
BcaB06g27846 Brassica carinata HOM05D001756 ORTHO05D001581 7.0e-38 160.2 86 94.2
Sp4g01910 Schrenkiella parvula HOM05D001756 ORTHO05D001581 9.7e-32 139.8 88 80.7
Thhalv10000381m.g Eutrema salsugineum HOM05D001756 ORTHO05D001581 2.2e-28 128.6 87 80.5
AL4G12440 Arabidopsis lyrata HOM05D001756 ORTHO05D001581 3.8e-28 127.9 88 76.1
CARHR114180 Cardamine hirsuta HOM05D001756 ORTHO05D001581 7.2e-27 123.6 84 76.2
CARHR114170 Cardamine hirsuta HOM05D001756 ORTHO05D001581 1.6e-26 122.5 84 75.0
Carub.0004s0199 Capsella rubella HOM05D001756 ORTHO05D001581 2.7e-26 121.7 88 72.7
AT2G22860 Arabidopsis thaliana HOM05D001756 ORTHO05D001581 1.2e-24 116.3 86 73.3
THA.LOC104819883 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 1.1e-19 99.8 86 59.3
THA.LOC104804198 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 8.0e-18 93.6 84 53.6
CARHR246110 Cardamine hirsuta HOM05D012092 ORTHO05D001581 2.2e-15 85.5 83 60.2
AT4G37720 Arabidopsis thaliana HOM05D012092 ORTHO05D001581 1.4e-14 82.8 83 55.4
Prupe.6G217500 Prunus persica HOM05D001756 ORTHO05D001581 4.1e-14 81.3 81 53.1
Sp7g35370 Schrenkiella parvula HOM05D012092 ORTHO05D001581 4.1e-14 81.3 83 59.0
A08p22740 Brassica napus HOM05D012092 ORTHO05D001581 1.6e-13 79.3 83 59.0
BraA08t34243Z Brassica rapa HOM05D012092 ORTHO05D001581 1.6e-13 79.3 83 59.0
Cpa.g.c33491 Carica papaya HOM05D001756 ORTHO05D001581 2.7e-13 78.6 84 54.8
BcaB03g12333 Brassica carinata HOM05D012092 ORTHO05D001581 1.0e-12 76.6 87 54.0
Carub.0007s0253 Capsella rubella HOM05D012092 ORTHO05D001581 3.8e-12 74.7 85 55.3
Rhsim10G0094800 Rhododendron simsii HOM05D001756 ORTHO05D001581 6.6e-12 73.9 82 50.0
Hma1.2p1_1760F.1_g301210 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 8.6e-12 73.6 83 48.2
Hma1.2p1_2434F.1_g322120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 1.5e-11 72.8 83 48.2
Sp5g12310 Schrenkiella parvula HOM05D001756 ORTHO05D001581 3.3e-11 71.6 83 51.8
Lj7A111T6 Lonicera japonica HOM05D001756 ORTHO05D001581 7.2e-11 70.5 83 49.4
Actinidia16413 Actinidia chinensis HOM05D001756 ORTHO05D001581 1.2e-10 69.7 80 50.0
Actinidia28000 Actinidia chinensis HOM05D001756 ORTHO05D001581 1.2e-10 69.7 83 51.8
AL7G12960 Arabidopsis lyrata HOM05D012092 ORTHO05D001581 1.6e-10 69.3 65 55.4
BcaNung02085 Brassica carinata HOM05D012092 ORTHO05D001581 2.1e-10 68.9 81 51.9
C07p62600 Brassica napus HOM05D012092 ORTHO05D001581 2.1e-10 68.9 81 51.9
BolC7t46675H Brassica oleracea HOM05D012092 ORTHO05D001581 2.1e-10 68.9 81 51.9
A03p65500 Brassica napus HOM05D012092 ORTHO05D001581 2.8e-10 68.6 81 51.9
BraA03t15602Z Brassica rapa HOM05D012092 ORTHO05D001581 2.8e-10 68.6 81 51.9
Dinv09540 Davidia involucrata HOM05D001756 ORTHO05D001581 4.7e-10 67.8 85 49.4
Lj4A164T42 Lonicera japonica HOM05D001756 ORTHO05D001581 4.7e-10 67.8 83 44.6
Sabra07G0005100 Salix brachista HOM05D001756 ORTHO05D001581 4.7e-10 67.8 76 51.3
CARHR158860 Cardamine hirsuta HOM05D001756 ORTHO05D001581 6.1e-10 67.4 84 48.8
Thhalv10026843m.g Eutrema salsugineum HOM05D012092 ORTHO05D001581 6.1e-10 67.4 83 54.2
Potri.007G006800 Populus trichocarpa HOM05D001756 ORTHO05D001581 1.0e-09 66.6 76 48.7
THA.LOC104827714 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 1.0e-09 66.6 80 53.8
Actinidia04395 Actinidia chinensis HOM05D001756 ORTHO05D001581 1.4e-09 66.2 83 48.2
FAN23G1434 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.8e-09 65.9 78 48.7
AL5G29770 Arabidopsis lyrata HOM05D001756 ORTHO05D001581 3.0e-09 65.1 83 48.2
AT3G49780 Arabidopsis thaliana HOM05D001756 ORTHO05D001581 3.0e-09 65.1 83 47.0
C08p24800 Brassica napus HOM05D001756 ORTHO05D001581 3.0e-09 65.1 83 48.2
BolC8t50097H Brassica oleracea HOM05D001756 ORTHO05D001581 3.0e-09 65.1 83 48.2
CSS0039448 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 3.0e-09 65.1 76 48.7
Eucgr.H02325 Eucalyptus grandis HOM05D001756 ORTHO05D001581 3.0e-09 65.1 83 45.8
Hma1.2p1_0424F.1_g150520 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 3.0e-09 65.1 83 45.8
RcHm_v2.0_Chr2g0108571 Rosa chinensis HOM05D001756 ORTHO05D001581 3.0e-09 65.1 77 48.1
Hma1.2p1_1051F.1_g252120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 4.0e-09 64.7 84 47.6
Thecc.01G075600 Theobroma cacao HOM05D001756 ORTHO05D001581 4.0e-09 64.7 83 45.8
Actinidia34539 Actinidia chinensis HOM05D001756 ORTHO05D001581 5.2e-09 64.3 84 46.4
Actinidia11965 Actinidia chinensis HOM05D001756 ORTHO05D001581 6.8e-09 63.9 87 44.8
A09p42920 Brassica napus HOM05D001756 ORTHO05D001581 8.9e-09 63.5 83 48.2
BraA09t39759Z Brassica rapa HOM05D001756 ORTHO05D001581 8.9e-09 63.5 83 48.2
CSS0040959 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 8.9e-09 63.5 82 42.7
Carub.0005s1613 Capsella rubella HOM05D001756 ORTHO05D001581 8.9e-09 63.5 83 47.0
Thhalv10010875m.g Eutrema salsugineum HOM05D001756 ORTHO05D001581 8.9e-09 63.5 83 45.8
Dinv26955 Davidia involucrata HOM05D001756 ORTHO05D001581 1.2e-08 63.2 84 46.4
Duzib264G0169 Durio zibethinus HOM05D001756 ORTHO05D001581 1.2e-08 63.2 88 43.2
FAN26G2568 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.5e-08 62.8 78 44.9
CSS0000381 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 2.0e-08 62.4 82 42.7
RhsimUnG0041200 Rhododendron simsii HOM05D001756 ORTHO05D001581 2.0e-08 62.4 84 47.6
RhsimUnG0123200 Rhododendron simsii HOM05D001756 ORTHO05D001581 2.0e-08 62.4 84 47.6
vmacro01948 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 2.0e-08 62.4 82 47.6
COL.COLO4_11608 Corchorus olitorius HOM05D001756 ORTHO05D001581 2.6e-08 62.0 83 43.4
Duzib147G1196 Durio zibethinus HOM05D001756 ORTHO05D001581 2.6e-08 62.0 89 44.9
Eucgr.H02324 Eucalyptus grandis HOM05D001756 ORTHO05D001581 2.6e-08 62.0 81 45.7
MD02G1189200 Malus domestica HOM05D001756 ORTHO05D001581 2.6e-08 62.0 77 50.6
Sabra14G0006400 Salix brachista HOM05D001756 ORTHO05D001581 2.6e-08 62.0 80 48.8
Rhsim08G0091500 Rhododendron simsii HOM05D001756 ORTHO05D001581 4.4e-08 61.2 75 49.3
RhsimUnG0122800 Rhododendron simsii HOM05D001756 ORTHO05D001581 4.4e-08 61.2 74 50.0
vmacro01947 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 4.4e-08 61.2 83 47.0
Atru.chr3.1054 Acer truncatum HOM05D001756 ORTHO05D001581 5.7e-08 60.8 79 45.6
Rhsim08G0091000 Rhododendron simsii HOM05D001756 ORTHO05D001581 5.7e-08 60.8 80 48.8
Gohir.A12G078300 Gossypium hirsutum HOM05D001756 ORTHO05D001581 7.5e-08 60.5 92 42.4
Rhsim08G0091400 Rhododendron simsii HOM05D001756 ORTHO05D001581 7.5e-08 60.5 75 49.3
C01p30590 Brassica napus HOM05D001756 ORTHO05D001581 9.8e-08 60.1 84 46.4
BolC1t02995H Brassica oleracea HOM05D001756 ORTHO05D001581 9.8e-08 60.1 84 46.4
CAN.G1343.2 Capsicum annuum HOM05D001756 ORTHO05D001581 9.8e-08 60.1 78 44.9
CDE04G0180 Ceratophyllum demersum HOM05D001756 ORTHO05D001581 9.8e-08 60.1 82 42.7
RcHm_v2.0_Chr6g0309921 Rosa chinensis HOM05D001756 ORTHO05D001581 9.8e-08 60.1 88 44.3
BcaC07g39442 Brassica carinata HOM05D001756 ORTHO05D001581 1.3e-07 59.7 74 50.0
CiPaw.06G164100 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.3e-07 59.7 84 44.0
AUR62004029 Chenopodium quinoa HOM05D001756 ORTHO05D001581 1.3e-07 59.7 82 46.3
Dinv16070 Davidia involucrata HOM05D001756 ORTHO05D001581 1.3e-07 59.7 85 45.9
FvH4_2g32750 Fragaria vesca HOM05D001756 ORTHO05D001581 1.3e-07 59.7 86 46.5
FAN24G1728 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.3e-07 59.7 86 46.5
Gorai.008G085100 Gossypium raimondii HOM05D001756 ORTHO05D001581 1.3e-07 59.7 92 43.5
MD15G1300000 Malus domestica HOM05D001756 ORTHO05D001581 1.3e-07 59.7 82 45.1
SalBow6G1126 Salvia bowleyana HOM05D001756 ORTHO05D001581 1.3e-07 59.7 85 51.8
TAR628G0014 Trochodendron aralioides HOM05D001756 ORTHO05D001581 1.3e-07 59.7 80 42.5
AUR62007537 Chenopodium quinoa HOM05D001756 ORTHO05D001581 1.7e-07 59.3 83 49.4
Gohir.D12G076500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.7e-07 59.3 92 43.5
Lj5g0025862 Lotus japonicus HOM05D001756 ORTHO05D001581 1.7e-07 59.3 81 48.1
Potri.002G116300 Populus trichocarpa HOM05D001756 ORTHO05D001581 1.7e-07 59.3 84 42.9
A01p24530 Brassica napus HOM05D001756 ORTHO05D001581 2.2e-07 58.9 84 45.2
BraA01t02363Z Brassica rapa HOM05D001756 ORTHO05D001581 2.2e-07 58.9 84 45.2
CSS0048145 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 2.2e-07 58.9 86 41.9
Dinv44936 Davidia involucrata HOM05D001756 ORTHO05D001581 2.2e-07 58.9 82 46.3
TAR376G0419 Trochodendron aralioides HOM05D001756 ORTHO05D001581 2.2e-07 58.9 82 42.7
Actinidia00357 Actinidia chinensis HOM05D001756 ORTHO05D001581 2.8e-07 58.5 72 48.6
BcaB01g00674 Brassica carinata HOM05D001756 ORTHO05D001581 2.8e-07 58.5 74 50.0
BcaB05g23153 Brassica carinata HOM05D001756 ORTHO05D001581 2.8e-07 58.5 74 48.6
Eucgr.I00676 Eucalyptus grandis HOM05D001756 ORTHO05D001581 2.8e-07 58.5 76 46.1
Glyma.14G089063 Glycine max HOM05D001756 ORTHO05D001581 2.8e-07 58.5 82 40.2
QL12p038416 Quercus lobata HOM05D001756 ORTHO05D001581 2.8e-07 58.5 82 42.7
FAN27G1437 Fragaria x ananassa HOM05D001756 ORTHO05D001581 3.7e-07 58.2 87 46.0
Oeu025312.1 Olea europaea HOM05D001756 ORTHO05D001581 3.7e-07 58.2 84 38.1
Potri.014G006900 Populus trichocarpa HOM05D001756 ORTHO05D001581 3.7e-07 58.2 78 46.2
Prupe.1G420000 Prunus persica HOM05D001756 ORTHO05D001581 3.7e-07 58.2 79 45.6
TWI77G0501 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 3.7e-07 58.2 72 45.8
BcaC09g49971 Brassica carinata HOM05D001756 ORTHO05D001581 4.9e-07 57.8 75 49.3
CiPaw.02G001200 Carya illinoinensis HOM05D001756 ORTHO05D001581 4.9e-07 57.8 81 42.0
GSVIVG01004437001 Vitis vinifera HOM05D001756 ORTHO05D001581 4.9e-07 57.8 74 43.2
Atru.chr5.2299 Acer truncatum HOM05D001756 ORTHO05D001581 6.3e-07 57.4 78 46.2
Manes.12G117100 Manihot esculenta HOM05D001756 ORTHO05D001581 6.3e-07 57.4 77 49.4
CiPaw.01G002400 Carya illinoinensis HOM05D001756 ORTHO05D001581 8.3e-07 57.0 81 46.9
Glyma.17G233400 Glycine max HOM05D001756 ORTHO05D001581 8.3e-07 57.0 83 38.6
Nitab4.5_0000142g0340 Nicotiana tabacum HOM05D001756 ORTHO05D001581 8.3e-07 57.0 76 48.7
PGR004G0933 Punica granatum HOM05D001756 ORTHO05D001581 8.3e-07 57.0 81 48.1
EL10Ac6g15597 Beta vulgaris HOM05D001756 ORTHO05D001581 1.1e-06 56.6 85 45.9
Gohir.D11G210700 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.1e-06 56.6 95 41.1
Gorai.007G226000 Gossypium raimondii HOM05D001756 ORTHO05D001581 1.1e-06 56.6 95 41.1
Psat2g172320 Pisum sativum HOM05D001756 ORTHO05D001581 1.1e-06 56.6 80 41.2
vmacro18016 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 1.1e-06 56.6 81 45.7
CSS0048277 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 1.4e-06 56.2 80 45.0
CSS0049317 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 1.4e-06 56.2 80 45.0
Cfa004702 Carpinus fangiana HOM05D001756 ORTHO05D001581 1.4e-06 56.2 83 45.8
Haze_10304 Corylus avellana HOM05D001756 ORTHO05D001581 1.4e-06 56.2 80 46.2
Rhsim06G0064100 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.4e-06 56.2 84 45.2
TWI23G1082 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 1.4e-06 56.2 80 46.2
GSVIVG01009309001 Vitis vinifera HOM05D001756 ORTHO05D001581 1.4e-06 56.2 83 45.8
CAN.G1343.3 Capsicum annuum HOM05D001756 ORTHO05D001581 1.8e-06 55.8 77 40.3
Cfa004383 Carpinus fangiana HOM05D001756 ORTHO05D001581 1.8e-06 55.8 82 45.1
CsaV3_6G044290 Cucumis sativus L. HOM05D001756 ORTHO05D001581 1.8e-06 55.8 81 42.0
Duzib187G0009 Durio zibethinus HOM05D001756 ORTHO05D001581 1.8e-06 55.8 83 43.4
FAN15G0430 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.8e-06 55.8 87 43.7
Manes.07G057300 Manihot esculenta HOM05D001756 ORTHO05D001581 1.8e-06 55.8 76 42.1
Ca_24672_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 2.4e-06 55.5 79 41.8
Ca_30012_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 2.4e-06 55.5 79 41.8
Glyma.17G233500 Glycine max HOM05D001756 ORTHO05D001581 2.4e-06 55.5 82 37.8
Gohir.A11G212500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 2.4e-06 55.5 92 42.4
HanXRQChr12g0376281 Helianthus annuus HOM05D001756 ORTHO05D001581 2.4e-06 55.5 75 48.0
Solyc02g092110.3 Solanum lycopersicum HOM05D001756 ORTHO05D001581 2.4e-06 55.5 75 48.0
arahy.Tifrunner.gnm1.ann1.200WTN Arachis hypogaea HOM05D001756 ORTHO05D001581 3.1e-06 55.1 86 37.2
Ciclev10029689m.g Citrus clementina HOM05D001756 ORTHO05D001581 3.1e-06 55.1 61 42.6
ECA238G4790 Erigeron canadensis HOM05D001756 ORTHO05D001581 3.1e-06 55.1 76 44.7
Nitab4.5_0002525g0020 Nicotiana tabacum HOM05D001756 ORTHO05D001581 3.1e-06 55.1 81 39.5
Oeu028918.1 Olea europaea HOM05D001756 ORTHO05D001581 3.1e-06 55.1 84 38.1
PGSC0003DMG400021406 Solanum tuberosum HOM05D001756 ORTHO05D001581 3.1e-06 55.1 75 48.0
arahy.Tifrunner.gnm1.ann1.APU27B Arachis hypogaea HOM05D001756 ORTHO05D001581 4.1e-06 54.7 86 36.0
ClCG01G017770 Citrullus lanatus HOM05D001756 ORTHO05D001581 4.1e-06 54.7 83 42.2
Cc07_g07320 Coffea canephora HOM05D001756 ORTHO05D001581 4.1e-06 54.7 83 39.8
COL.COLO4_28472 Corchorus olitorius HOM05D001756 ORTHO05D001581 4.1e-06 54.7 84 44.0
PGR042G3192 Punica granatum HOM05D001756 ORTHO05D001581 4.1e-06 54.7 77 48.1
PGSC0003DMG400021407 Solanum tuberosum HOM05D001756 ORTHO05D001581 4.1e-06 54.7 74 41.9
BcaC06g33373 Brassica carinata HOM05D012092 ORTHO05D001581 5.4e-06 54.3 70 47.1
Dinv23040 Davidia involucrata HOM05D001756 ORTHO05D001581 5.4e-06 54.3 85 44.7
Migut.B00462 Erythranthe guttata HOM05D001756 ORTHO05D001581 5.4e-06 54.3 78 41.0
Manes.13G109600 Manihot esculenta HOM05D001756 ORTHO05D001581 5.4e-06 54.3 85 45.9
CiPaw.05G020600 Carya illinoinensis HOM05D001756 ORTHO05D001581 7.0e-06 53.9 77 44.2
Ciclev10026870m.g Citrus clementina HOM05D001756 ORTHO05D001581 7.0e-06 53.9 79 41.8
Sopen02g036700 Solanum pennellii HOM05D001756 ORTHO05D001581 7.0e-06 53.9 75 46.7
Thecc.02G119700 Theobroma cacao HOM05D001756 ORTHO05D001581 7.0e-06 53.9 82 45.1
GSVIVG01037055001 Vitis vinifera HOM05D001756 ORTHO05D001581 7.0e-06 53.9 85 45.9
ECA246G3808 Erigeron canadensis HOM05D001756 ORTHO05D001581 9.2e-06 53.5 75 42.7
Hma1.2p1_0210F.1_g089330 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 9.2e-06 53.5 80 45.0
Medtr5g015140 Medicago truncatula HOM05D001756 ORTHO05D001581 9.2e-06 53.5 80 41.2
Phvul.007G047000 Phaseolus vulgaris HOM05D001756 ORTHO05D001581 9.2e-06 53.5 39 69.2
Sabra02G0091600 Salix brachista HOM05D001756 ORTHO05D001581 9.2e-06 53.5 78 44.9
THA.LOC104825794 Tarenaya hassleriana HOM05D001756 ORTHO05D015390 9.2e-06 53.5 80 40.0


User provided reference genes

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