Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p16590 Brassica napus HOM05D007759 ORTHO05D008318 1.2e-106 389.8 190 100.0
A07p25500 Brassica napus HOM05D007759 ORTHO05D008318 3.2e-104 381.7 190 98.4
A05p26180 Brassica napus HOM05D007759 ORTHO05D008318 1.8e-102 375.9 190 96.3
A07p18500 Brassica napus HOM05D007759 ORTHO05D008318 2.8e-87 325.5 190 82.1
BcaC08g46655 Brassica carinata HOM05D007759 ORTHO05D008318 1.2e-85 320.1 190 82.6
BcaC03g17946 Brassica carinata HOM05D007759 ORTHO05D008318 1.7e-84 316.2 190 81.1
A09p15820 Brassica napus HOM05D007759 ORTHO05D008318 1.4e-83 313.2 190 81.1
BcaC05g25628 Brassica carinata HOM05D007011 ORTHO05D008837 3.5e-82 308.5 190 78.9
BolSC21t60227H Brassica oleracea HOM05D007759 ORTHO05D008318 1.1e-72 276.9 171 79.5
BcaC01g02224 Brassica carinata HOM05D007759 ORTHO05D008318 4.3e-72 275.0 171 78.9
C03p67680 Brassica napus HOM05D007759 ORTHO05D008318 4.3e-72 275.0 171 78.9
A09p16180 Brassica napus HOM05D000305 ORTHO05D000065 1.2e-71 273.5 167 79.6
BraA09t37253Z Brassica rapa HOM05D000305 ORTHO05D000065 2.1e-71 272.7 167 79.6
BolC6t39668H Brassica oleracea HOM05D000305 ORTHO05D000065 1.1e-70 270.4 167 79.6
C02p60070 Brassica napus HOM05D000305 ORTHO05D000065 5.2e-70 268.1 167 77.8
BcaB04g19215 Brassica carinata HOM05D007759 ORTHO05D008318 6.9e-54 214.5 174 60.9
BcaNung02441 Brassica carinata HOM05D007759 ORTHO05D008318 1.7e-49 199.9 175 57.7
A07p09660 Brassica napus HOM05D007759 ORTHO05D008318 1.5e-48 196.8 181 54.7
A03p64890 Brassica napus HOM05D007759 ORTHO05D008318 4.3e-48 195.3 181 54.1
A05p25410 Brassica napus HOM05D007759 ORTHO05D008318 5.6e-48 194.9 181 53.6
BcaC05g28733 Brassica carinata HOM05D007759 ORTHO05D008318 7.3e-48 194.5 163 58.3
A09p61940 Brassica napus HOM05D007759 ORTHO05D008318 7.3e-48 194.5 181 54.1
BolC5t33570H Brassica oleracea HOM05D007759 ORTHO05D008318 7.3e-48 194.5 163 58.3
BcaC02g11605 Brassica carinata HOM05D007759 ORTHO05D008318 1.6e-47 193.4 163 58.9
A05p45000 Brassica napus HOM05D007759 ORTHO05D008318 1.6e-47 193.4 181 53.6
C04p13390 Brassica napus HOM05D007759 ORTHO05D008318 1.6e-47 193.4 163 58.9
C01p19090 Brassica napus HOM05D007759 ORTHO05D008318 3.6e-47 192.2 163 58.3
A09p35430 Brassica napus HOM05D007759 ORTHO05D008318 1.2e-45 187.2 163 57.7
BcaC04g21104 Brassica carinata HOM05D007759 ORTHO05D008318 2.0e-45 186.4 181 54.1
BolC6t36449H Brassica oleracea HOM05D007759 ORTHO05D008318 2.0e-45 186.4 163 57.7
BraA08t32106Z Brassica rapa HOM05D007759 ORTHO05D008318 7.6e-45 184.5 163 57.1
BraA02t06461Z Brassica rapa HOM05D007759 ORTHO05D008318 4.9e-44 181.8 163 55.8
BcaC02g10745 Brassica carinata HOM05D007759 ORTHO05D008318 1.9e-43 179.9 145 62.1
C04p25470 Brassica napus HOM05D007759 ORTHO05D008318 1.9e-43 179.9 145 62.1
C08p12830 Brassica napus HOM05D007759 ORTHO05D008318 1.9e-43 179.9 153 64.1
BolC4t24065H Brassica oleracea HOM05D007759 ORTHO05D008318 1.9e-43 179.9 145 62.1
A05p10430 Brassica napus HOM05D007759 ORTHO05D008318 4.2e-43 178.7 91 98.9
BcaC05g27963 Brassica carinata HOM05D007759 ORTHO05D008318 1.2e-42 177.2 163 55.8
C01p11620 Brassica napus HOM05D007759 ORTHO05D008318 6.0e-42 174.9 175 52.6
BcaC02g10768 Brassica carinata HOM05D007759 ORTHO05D008318 2.3e-41 172.9 141 60.3
C04p25320 Brassica napus HOM05D007759 ORTHO05D008318 2.3e-41 172.9 141 60.3
BraA03t13280Z Brassica rapa HOM05D007759 ORTHO05D008318 6.2e-39 164.9 145 54.5
A08p07380 Brassica napus HOM05D000305 ORTHO05D008318 2.4e-38 162.9 177 46.9
BraA05t20148Z Brassica rapa HOM05D007759 ORTHO05D008318 4.0e-38 162.2 145 54.5
BcaC04g19163 Brassica carinata HOM05D007759 ORTHO05D008318 6.9e-38 161.4 142 59.9
BraA08t32755Z Brassica rapa HOM05D007759 ORTHO05D008318 9.0e-38 161.0 175 46.9
BcaB02g07732 Brassica carinata HOM05D007759 ORTHO05D008318 4.5e-37 158.7 185 43.8
BcaB01g03487 Brassica carinata HOM05D007759 ORTHO05D008318 2.2e-36 156.4 144 58.3
C06p12950 Brassica napus HOM05D007759 ORTHO05D008318 2.2e-36 156.4 137 57.7
BraA05t23159Z Brassica rapa HOM05D007759 ORTHO05D008318 3.8e-36 155.6 141 51.8
C09p35650 Brassica napus HOM05D007759 ORTHO05D008318 4.9e-36 155.2 138 57.2
BcaB03g12128 Brassica carinata HOM05D007759 ORTHO05D008318 6.5e-36 154.8 144 57.6
BcaC09g51523 Brassica carinata HOM05D007759 ORTHO05D008318 6.5e-36 154.8 185 43.2
BcaC09g50938 Brassica carinata HOM05D007759 ORTHO05D008318 1.4e-35 153.7 163 52.1
C05p36840 Brassica napus HOM05D000305 ORTHO05D008318 1.6e-34 150.2 185 42.2
BcaC05g27701 Brassica carinata HOM05D007759 ORTHO05D008318 3.5e-34 149.1 185 42.2
C09p64240 Brassica napus HOM05D007759 ORTHO05D008318 1.0e-33 147.5 124 62.1
BolC9t59261H Brassica oleracea HOM05D007759 ORTHO05D008318 1.0e-33 147.5 124 62.1
BcaC01g00595 Brassica carinata HOM05D007759 ORTHO05D008318 3.9e-33 145.6 145 51.7
BolC6t39089H Brassica oleracea HOM05D007759 ORTHO05D008318 5.1e-33 145.2 125 59.2
BcaC08g43908 Brassica carinata HOM05D007759 ORTHO05D008318 1.1e-32 144.1 125 58.4
C01p16160 Brassica napus HOM05D007759 ORTHO05D008318 1.1e-32 144.1 122 61.5
BcaB06g27974 Brassica carinata HOM05D000305 ORTHO05D000065 5.7e-32 141.7 124 59.7
BolC5t32424H Brassica oleracea HOM05D000305 ORTHO05D008318 5.7e-32 141.7 187 41.2
BolC9t56401H Brassica oleracea HOM05D007759 ORTHO05D008318 3.7e-31 139.0 120 58.3
BraA06t24735Z Brassica rapa HOM05D007759 ORTHO05D008318 8.2e-31 137.9 125 56.8
BraA03t15551Z Brassica rapa HOM05D007759 ORTHO05D008318 1.1e-30 137.5 125 56.8
A09p55860 Brassica napus HOM05D007759 ORTHO05D008318 1.3e-28 130.6 124 55.6
BraA09t40989Z Brassica rapa HOM05D007759 ORTHO05D008318 1.3e-28 130.6 124 55.6
C03p87080 Brassica napus HOM05D007759 ORTHO05D008318 2.2e-28 129.8 119 57.1
BolC5t31112H Brassica oleracea HOM05D007759 ORTHO05D008318 4.2e-27 125.6 102 58.8
BcaB06g26374 Brassica carinata HOM05D007759 ORTHO05D008318 2.7e-26 122.9 107 59.8
BcaC04g21617 Brassica carinata HOM05D007759 ORTHO05D008318 6.1e-26 121.7 106 60.4
BolC1t01835H Brassica oleracea HOM05D007759 ORTHO05D008318 6.1e-26 121.7 107 57.0
BcaC09g50078 Brassica carinata HOM05D000305 ORTHO05D000065 1.0e-25 120.9 170 40.0
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-23 114.0 141 41.8
BolC3t21010H Brassica oleracea HOM05D007759 ORTHO05D008318 1.6e-23 113.6 101 57.4
BolC6t37317H Brassica oleracea HOM05D007759 ORTHO05D008318 2.2e-23 113.2 185 36.8
BolC8t47656H Brassica oleracea HOM05D000096 ORTHO05D000045 6.3e-23 111.7 141 41.8
C01p16170 Brassica napus HOM05D007759 ORTHO05D008318 1.5e-21 107.1 120 53.3
BraA04t15920Z Brassica rapa HOM05D009716 ORTHO05D008318 2.2e-20 103.2 134 38.1
BolC8t48618H Brassica oleracea HOM05D009716 ORTHO05D008318 3.8e-20 102.4 135 38.5
BraA03t15217Z Brassica rapa HOM05D009716 ORTHO05D008318 1.1e-19 100.9 136 37.5
Thhalv10002215m.g Eutrema salsugineum HOM05D007759 ORTHO05D008318 3.2e-19 99.4 161 34.8
BcaNung04086 Brassica carinata HOM05D007759 ORTHO05D008318 2.7e-18 96.3 84 59.5
BolC7t43125H Brassica oleracea HOM05D009716 ORTHO05D008318 4.6e-18 95.5 124 39.5
A06p29370 Brassica napus HOM05D007759 ORTHO05D008318 5.1e-17 92.0 92 52.2
Carub.0001s4072 Capsella rubella HOM05D007759 ORTHO05D008318 2.2e-15 86.7 168 32.7
BcaB06g26970 Brassica carinata HOM05D007759 ORTHO05D008318 8.2e-15 84.7 84 45.2
BcaC05g27285 Brassica carinata HOM05D009716 ORTHO05D008318 1.8e-14 83.6 110 39.1
C05p39710 Brassica napus HOM05D007759 ORTHO05D008318 1.8e-14 83.6 91 48.4
Carub.0003s3131 Capsella rubella HOM05D007759 ORTHO05D008318 4.1e-14 82.4 168 31.5
AL4G17992 Arabidopsis lyrata HOM05D007759 ORTHO05D008318 6.9e-14 81.6 100 39.0
BolC1t02858H Brassica oleracea HOM05D007759 ORTHO05D008318 1.2e-13 80.9 155 35.5
BolC4t24039H Brassica oleracea HOM05D007759 ORTHO05D008318 4.5e-13 79.0 64 64.1
C01p29370 Brassica napus HOM05D000305 ORTHO05D000065 1.3e-12 77.4 149 36.2
BolC1t02876H Brassica oleracea HOM05D000305 ORTHO05D000065 1.7e-12 77.0 155 34.8
A09p01240 Brassica napus HOM05D007759 ORTHO05D008318 3.8e-12 75.9 75 49.3
BolC8t46859H Brassica oleracea HOM05D009716 ORTHO05D008318 1.4e-11 73.9 85 40.0
C01p29320 Brassica napus HOM05D000305 ORTHO05D000065 2.5e-11 73.2 155 34.8
BcaB07g32952 Brassica carinata HOM05D007759 ORTHO05D008318 5.5e-11 72.0 56 62.5
BraA01t01960Z Brassica rapa HOM05D009716 ORTHO05D008318 5.5e-11 72.0 104 37.5
A08p19220 Brassica napus HOM05D007759 ORTHO05D008318 1.6e-10 70.5 64 57.8
BraA08t33884Z Brassica rapa HOM05D007759 ORTHO05D008318 1.6e-10 70.5 64 57.8
BcaC01g00980 Brassica carinata HOM05D007759 ORTHO05D008318 2.1e-10 70.1 57 61.4
BcaB03g15150 Brassica carinata HOM05D009716 ORTHO05D008318 6.1e-10 68.6 119 30.3
BcaC02g08813 Brassica carinata HOM05D009716 ORTHO05D008318 1.1e-08 64.3 90 38.9
BcaB02g10590 Brassica carinata HOM05D007759 ORTHO05D008318 5.7e-08 62.0 71 46.5
C09p53520 Brassica napus HOM05D007759 ORTHO05D008318 1.3e-07 60.8 43 53.5
BolC9t58228H Brassica oleracea HOM05D007759 ORTHO05D008318 1.3e-07 60.8 43 53.5
BcaC09g50072 Brassica carinata HOM05D007759 ORTHO05D008318 3.7e-07 59.3 71 45.1
HanXRQChr08g0224571 Helianthus annuus HOM05D000187 ORTHO05D000230 3.7e-07 59.3 141 34.8
HanXRQChr08g0224121 Helianthus annuus HOM05D000187 ORTHO05D000230 4.8e-07 58.9 141 34.8
HanXRQChr08g0224131 Helianthus annuus HOM05D000187 ORTHO05D000230 1.1e-06 57.8 141 34.0
PSO210G2441 Papaver somniferum HOM05D000187 ORTHO05D000230 1.4e-06 57.4 49 44.9
BcaC09g48842 Brassica carinata HOM05D009716 ORTHO05D008318 1.8e-06 57.0 81 39.5
Lj2C677T7 Lonicera japonica HOM05D000082 ORTHO05D000038 3.1e-06 56.2 64 35.9
Aa31sc466G20 Aethionema arabicum HOM05D000341 ORTHO05D001197 4.1e-06 55.8 51 41.2
Phvul.006G018000 Phaseolus vulgaris HOM05D000082 ORTHO05D000038 4.1e-06 55.8 131 29.8
Thhalv10020821m.g Eutrema salsugineum HOM05D000082 ORTHO05D000038 7.0e-06 55.1 74 36.5
Sc07g0003190 Simmondsia chinensis HOM05D003651 ORTHO05D010159 7.0e-06 55.1 51 37.3
FvH4_4g33530 Fragaria vesca HOM05D000459 ORTHO05D000798 9.1e-06 54.7 50 44.0
FAN07G0922 Fragaria x ananassa HOM05D000459 ORTHO05D000798 9.1e-06 54.7 50 44.0
FAN12G4292 Fragaria x ananassa HOM05D000459 ORTHO05D000798 9.1e-06 54.7 50 44.0
FAN22G0958 Fragaria x ananassa HOM05D000459 ORTHO05D000798 9.1e-06 54.7 50 44.0
Lj2C677T8 Lonicera japonica HOM05D000082 ORTHO05D000038 9.1e-06 54.7 66 33.3
RcHm_v2.0_Chr4g0443041 Rosa chinensis HOM05D000459 ORTHO05D000798 9.1e-06 54.7 50 44.0


User provided reference genes

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