Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p16170 Brassica napus HOM05D016962 ORTHO05D018713 1.3e-32 142.5 72 100.0
A09p46710 Brassica napus HOM05D016962 ORTHO05D018713 3.7e-32 141.0 72 98.6
BcaC08g44235 Brassica carinata HOM05D016962 ORTHO05D018713 2.4e-31 138.3 72 95.8
C09p30520 Brassica napus HOM05D016962 ORTHO05D018713 2.4e-31 138.3 72 95.8
BolC3t21573H Brassica oleracea HOM05D016962 ORTHO05D018713 2.4e-31 138.3 72 95.8
BraA07t27824Z Brassica rapa HOM05D016962 ORTHO05D018713 6.9e-31 136.7 72 94.4
BcaC01g01512 Brassica carinata HOM05D016962 ORTHO05D018713 1.2e-30 136.0 72 94.4
BolC2t09527H Brassica oleracea HOM05D016962 ORTHO05D018713 5.8e-30 133.7 72 93.1
BcaB02g06729 Brassica carinata HOM05D000297 ORTHO05D000336 2.9e-21 104.8 65 80.0
BcaC06g34338 Brassica carinata HOM05D005450 ORTHO05D006880 2.8e-16 88.2 54 87.0
C07p30200 Brassica napus HOM05D005450 ORTHO05D006880 2.8e-16 88.2 54 87.0
BraA06t27430Z Brassica rapa HOM05D005450 ORTHO05D006880 2.8e-16 88.2 54 87.0
A06p45580 Brassica napus HOM05D005450 ORTHO05D006880 3.7e-16 87.8 54 85.2
BolC7t43556H Brassica oleracea HOM05D005450 ORTHO05D006880 1.4e-15 85.9 54 85.2
BcaC06g31440 Brassica carinata HOM05D005450 ORTHO05D006880 1.8e-15 85.5 53 86.8
Thhalv10000858m.g Eutrema salsugineum HOM05D005450 ORTHO05D006880 2.7e-11 71.6 71 60.6
AL8G11490 Arabidopsis lyrata HOM05D005450 ORTHO05D006880 6.1e-11 70.5 67 61.2
Sp2g11640 Schrenkiella parvula HOM05D005450 ORTHO05D006880 7.9e-11 70.1 66 57.6
Carub.0008s0107 Capsella rubella HOM05D005450 ORTHO05D006880 6.3e-08 60.5 63 58.7
CARHR174610 Cardamine hirsuta HOM05D005450 ORTHO05D006880 6.3e-08 60.5 54 64.8
AT5G46840 Arabidopsis thaliana HOM05D005450 ORTHO05D006880 4.5e-06 54.3 63 55.6


User provided reference genes

Program Settings