Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 1.6e-48 195.7 94 100.0
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 7.1e-44 180.3 94 93.6
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 2.7e-43 178.3 94 92.6
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 3.4e-38 161.4 92 82.6
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 1.3e-37 159.5 104 77.9
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 2.2e-37 158.7 84 85.7
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 8.4e-37 156.8 93 82.8
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 2.4e-36 155.2 92 77.2
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 2.8e-32 141.7 108 65.7
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 3.0e-26 121.7 68 79.4
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 4.2e-20 101.3 106 49.1
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 7.1e-20 100.5 69 71.0
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 7.1e-20 100.5 70 71.4
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 7.1e-20 100.5 68 67.6
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 2.7e-19 98.6 68 67.6
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 3.5e-19 98.2 66 68.2
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 7.9e-19 97.1 62 67.7
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 7.9e-19 97.1 68 67.6
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 1.0e-18 96.7 61 72.1
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 1.8e-18 95.9 71 63.4
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 2.3e-18 95.5 65 64.6
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 3.0e-18 95.1 52 76.9
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 3.0e-18 95.1 68 66.2
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 3.0e-18 95.1 85 55.3
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 3.0e-18 95.1 62 67.7
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 3.0e-18 95.1 56 71.4
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 3.9e-18 94.7 72 63.9
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 3.9e-18 94.7 80 57.5
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 3.9e-18 94.7 66 66.7
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 5.1e-18 94.4 69 62.3
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 5.1e-18 94.4 56 71.4
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 8.7e-18 93.6 57 68.4
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 8.7e-18 93.6 57 68.4
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 8.7e-18 93.6 74 59.5
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 1.1e-17 93.2 65 66.2
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 1.1e-17 93.2 67 64.2
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 1.1e-17 93.2 64 64.1
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 1.5e-17 92.8 73 57.5
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 1.5e-17 92.8 79 53.2
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 1.5e-17 92.8 69 60.9
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 1.5e-17 92.8 69 60.9
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 1.5e-17 92.8 69 59.4
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 1.9e-17 92.4 55 70.9
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 1.9e-17 92.4 69 60.9
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 1.9e-17 92.4 54 72.2
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 2.5e-17 92.0 62 66.1
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 2.5e-17 92.0 62 66.1
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 3.3e-17 91.7 56 67.9
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 3.3e-17 91.7 49 79.6
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 4.3e-17 91.3 67 62.7
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 4.3e-17 91.3 67 62.7
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 5.7e-17 90.9 66 65.2
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 7.4e-17 90.5 94 54.3
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 7.4e-17 90.5 69 59.4
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 7.4e-17 90.5 55 69.1
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 9.7e-17 90.1 68 60.3
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 9.7e-17 90.1 61 63.9
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 1.3e-16 89.7 66 65.2
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 1.3e-16 89.7 52 71.2
BcaC02g08810 Brassica carinata HOM05D007718 ORTHO05D009752 1.6e-16 89.4 42 92.9
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 1.6e-16 89.4 56 64.3
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 2.2e-16 89.0 61 62.3
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 2.2e-16 89.0 61 67.2
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 3.7e-16 88.2 56 62.5
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 3.7e-16 88.2 60 61.7
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 4.8e-16 87.8 64 60.9
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 8.2e-16 87.0 84 50.0
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 1.4e-15 86.3 56 66.1
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 3.1e-15 85.1 63 60.3
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 3.1e-15 85.1 65 55.4
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 6.9e-15 84.0 50 68.0
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 1.2e-14 83.2 57 63.2
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 1.5e-14 82.8 55 63.6
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 3.4e-14 81.6 65 52.3
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 5.9e-14 80.9 61 52.5
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 3.8e-13 78.2 56 53.6
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 5.0e-13 77.8 72 44.4
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 4.3e-09 64.7 50 56.0
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 5.7e-09 64.3 75 38.7
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 5.7e-09 64.3 38 68.4
Oeu020544.1 Olea europaea HOM05D007718 ORTHO05D009752 7.4e-09 63.9 39 69.2
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 7.4e-09 63.9 40 65.0
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 1.7e-08 62.8 63 47.6
VMungo1383G3332 Vigna mungo HOM05D000479 ORTHO05D001285 6.3e-08 60.8 36 66.7
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 5.3e-07 57.8 80 41.2


User provided reference genes

Program Settings