Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p15710 Brassica napus HOM05D000549 ORTHO05D099361 2.5e-50 201.8 105 100.0
BcaB06g29553 Brassica carinata HOM05D000549 ORTHO05D008973 7.7e-07 57.4 35 82.9
BcaC05g28999 Brassica carinata HOM05D000549 ORTHO05D008973 7.7e-07 57.4 35 82.9
C05p51940 Brassica napus HOM05D000549 ORTHO05D008973 7.7e-07 57.4 35 82.9
BolC5t33880H Brassica oleracea HOM05D000549 ORTHO05D008973 7.7e-07 57.4 35 82.9
Thhalv10021099m.g Eutrema salsugineum HOM05D000549 ORTHO05D008973 7.7e-07 57.4 35 82.9
Sp3g13490 Schrenkiella parvula HOM05D000549 ORTHO05D008973 7.7e-07 57.4 35 82.9
THA.LOC104818085 Tarenaya hassleriana HOM05D000549 ORTHO05D008973 1.3e-06 56.6 35 82.9
A05p34190 Brassica napus HOM05D000549 ORTHO05D008973 1.7e-06 56.2 35 80.0
BraA05t22239Z Brassica rapa HOM05D000549 ORTHO05D008973 1.7e-06 56.2 35 80.0
Aa31LG8G2470 Aethionema arabicum HOM05D000549 ORTHO05D008973 2.3e-06 55.8 35 80.0
AL1058U10010 Arabidopsis lyrata HOM05D000549 ORTHO05D008973 2.3e-06 55.8 35 80.0
AL3G27680 Arabidopsis lyrata HOM05D000549 ORTHO05D008973 2.3e-06 55.8 35 80.0
AT3G15290 Arabidopsis thaliana HOM05D000549 ORTHO05D008973 2.3e-06 55.8 35 80.0
Carub.0003s1494 Capsella rubella HOM05D000549 ORTHO05D008973 2.3e-06 55.8 35 80.0
Manes.03G107000 Manihot esculenta HOM05D000549 ORTHO05D008973 2.3e-06 55.8 35 77.1
CAN.G162.46 Capsicum annuum HOM05D000549 ORTHO05D008973 2.9e-06 55.5 35 80.0
Cc05_g11870 Coffea canephora HOM05D000549 ORTHO05D008973 2.9e-06 55.5 35 80.0
Migut.M00789 Erythranthe guttata HOM05D000549 ORTHO05D008973 2.9e-06 55.5 35 80.0
Solyc07g063010.3 Solanum lycopersicum HOM05D000549 ORTHO05D008973 2.9e-06 55.5 35 80.0
Sopen07g031200 Solanum pennellii HOM05D000549 ORTHO05D008973 2.9e-06 55.5 35 80.0
PGSC0003DMG400012409 Solanum tuberosum HOM05D000549 ORTHO05D008973 2.9e-06 55.5 35 80.0
TWI38G0085 Tripterygium wilfordii HOM05D000549 ORTHO05D008973 2.9e-06 55.5 35 80.0
PGR031G0697 Punica granatum HOM05D000549 ORTHO05D008973 3.8e-06 55.1 35 80.0
CARHR090270 Cardamine hirsuta HOM05D000549 ORTHO05D008973 5.0e-06 54.7 35 77.1
SalBow6G2784 Salvia bowleyana HOM05D000549 ORTHO05D008973 6.6e-06 54.3 35 80.0
Ah.04g164750 Amaranthus hybridus HOM05D000549 ORTHO05D008973 8.6e-06 53.9 35 77.1
AagrBONN_evm.TU.Sc2ySwM_228.2146 Anthoceros agrestis HOM05D000549 ORTHO05D008973 8.6e-06 53.9 35 77.1
EL10Ac4g08211 Beta vulgaris HOM05D000549 ORTHO05D008973 8.6e-06 53.9 35 77.1
CDE11G0549 Ceratophyllum demersum HOM05D000698 ORTHO05D008973 8.6e-06 53.9 35 74.3
AUR62019444 Chenopodium quinoa HOM05D000549 ORTHO05D008973 8.6e-06 53.9 35 77.1
Lsat_1_v5_gn_5_128041 Lactuca sativa HOM05D000549 ORTHO05D008973 8.6e-06 53.9 35 77.1
HPP92_015987 Vanilla planifolia HOM05D000549 ORTHO05D008973 8.6e-06 53.9 35 74.3
Zm00001eb369580 Zea mays HOM05D000549 ORTHO05D008973 8.6e-06 53.9 35 77.1


User provided reference genes

Program Settings