Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p15420 Brassica napus HOM05D011162 ORTHO05D013177 4.7e-93 345.9 454 100.0
BolC4t26552H Brassica oleracea HOM05D011162 ORTHO05D013177 1.9e-78 297.4 454 93.4
BraA04t17179Z Brassica rapa HOM05D011162 ORTHO05D013177 6.8e-76 288.9 454 93.0
BcaC02g08871 Brassica carinata HOM05D011162 ORTHO05D013177 2.3e-71 273.9 193 91.2
C04p49670 Brassica napus HOM05D011162 ORTHO05D013177 6.6e-71 272.3 454 91.0
BcaB06g27720 Brassica carinata HOM05D011162 ORTHO05D013177 2.5e-62 243.8 172 82.0
A04p11730 Brassica napus HOM05D011162 ORTHO05D013177 3.4e-35 153.7 153 57.5
BraA04t16841Z Brassica rapa HOM05D011162 ORTHO05D013177 2.9e-34 150.6 153 56.9
C04p45460 Brassica napus HOM05D011162 ORTHO05D013177 8.5e-34 149.1 153 56.2
BolC4t26127H Brassica oleracea HOM05D011162 ORTHO05D013177 8.5e-34 149.1 153 56.2
BcaB06g27255 Brassica carinata HOM05D011162 ORTHO05D013177 2.2e-29 134.4 146 54.1
Sp7g03040 Schrenkiella parvula HOM05D011162 ORTHO05D013177 9.1e-28 129.0 144 54.2
CARHR263720 Cardamine hirsuta HOM05D011162 ORTHO05D013177 2.6e-19 100.9 148 44.6
AL7G51560 Arabidopsis lyrata HOM05D011162 ORTHO05D013177 5.0e-18 96.7 187 48.7
AT5G38865 Arabidopsis thaliana HOM05D011162 ORTHO05D013177 4.2e-17 93.6 185 47.6
Thhalv10028187m.g Eutrema salsugineum HOM05D011162 ORTHO05D013177 1.0e-15 89.0 120 48.3
BcaC02g08870 Brassica carinata HOM05D011162 ORTHO05D013177 3.1e-12 77.4 66 66.7
THA.LOC104805529 Tarenaya hassleriana HOM05D003328 ORTHO05D003722 3.2e-09 67.4 184 33.7
Carub.0007s3698 Capsella rubella HOM05D011162 ORTHO05D013177 2.1e-08 64.7 148 41.2


User provided reference genes

Program Settings