Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 1.7e-57 226.1 144 100.0
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 1.4e-46 189.9 144 74.3
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 1.4e-46 189.9 144 74.3
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 3.7e-44 181.8 144 68.8
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 4.1e-43 178.3 145 66.9
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 1.2e-42 176.8 145 66.2
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 4.6e-42 174.9 146 65.8
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 4.6e-42 174.9 146 65.8
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 1.5e-40 169.9 123 70.7
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 8.1e-39 164.1 143 60.8
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 8.1e-39 164.1 143 71.3
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 1.5e-37 159.8 143 60.8
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 1.5e-37 159.8 125 65.6
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 1.1e-35 153.7 143 58.7
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 3.5e-34 148.7 144 59.0
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 6.2e-31 137.9 68 89.7
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 1.7e-28 129.8 78 73.1
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 2.2e-28 129.4 71 77.5
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 2.2e-28 129.4 71 81.7
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 2.2e-28 129.4 71 80.3
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 2.2e-28 129.4 142 47.9
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 4.9e-28 128.3 76 75.0
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 8.4e-28 127.5 68 82.4
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 8.4e-28 127.5 70 81.4
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 1.1e-27 127.1 74 75.7
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 1.9e-27 126.3 66 83.3
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 3.2e-27 125.6 72 77.8
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 3.2e-27 125.6 71 77.5
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 3.2e-27 125.6 66 83.3
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 3.2e-27 125.6 66 83.3
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 3.2e-27 125.6 72 76.4
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 4.1e-27 125.2 72 77.8
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 5.4e-27 124.8 72 75.0
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 7.1e-27 124.4 73 74.0
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 7.1e-27 124.4 66 83.3
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 9.2e-27 124.0 67 79.1
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 9.2e-27 124.0 66 81.8
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 1.2e-26 123.6 68 79.4
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 2.1e-26 122.9 66 81.8
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 2.7e-26 122.5 70 75.7
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 2.7e-26 122.5 74 74.3
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 3.5e-26 122.1 67 80.6
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 6.0e-26 121.3 71 73.2
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 6.0e-26 121.3 67 79.1
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 6.0e-26 121.3 67 77.6
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 7.8e-26 120.9 73 72.6
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 7.8e-26 120.9 65 80.0
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 1.0e-25 120.6 67 77.6
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.0e-25 120.6 67 77.6
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.0e-25 120.6 67 77.6
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 1.3e-25 120.2 73 72.6
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 1.3e-25 120.2 65 81.5
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 1.7e-25 119.8 67 76.1
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 2.3e-25 119.4 67 76.1
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 2.3e-25 119.4 74 71.6
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 2.3e-25 119.4 71 74.6
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 2.3e-25 119.4 71 74.6
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 3.0e-25 119.0 71 73.2
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 3.0e-25 119.0 68 77.9
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 3.9e-25 118.6 66 78.8
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 3.9e-25 118.6 71 74.6
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 3.9e-25 118.6 71 73.2
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 5.1e-25 118.2 67 76.1
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 5.1e-25 118.2 71 73.2
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 5.1e-25 118.2 66 81.8
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 6.6e-25 117.9 69 73.9
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 8.7e-25 117.5 70 74.3
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 8.7e-25 117.5 63 81.0
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 8.7e-25 117.5 62 83.9
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 1.1e-24 117.1 61 83.6
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 1.1e-24 117.1 71 71.8
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 1.1e-24 117.1 71 71.8
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 1.5e-24 116.7 68 75.0
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 1.9e-24 116.3 66 78.8
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 1.9e-24 116.3 66 77.3
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.9e-24 116.3 71 74.6
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 1.9e-24 116.3 71 74.6
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 1.9e-24 116.3 65 76.9
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 1.9e-24 116.3 68 76.5
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 1.9e-24 116.3 70 71.4
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 2.5e-24 115.9 71 70.4
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 2.5e-24 115.9 66 78.8
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 3.3e-24 115.5 60 83.3
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 3.3e-24 115.5 71 70.4
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 3.3e-24 115.5 70 71.4
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 4.3e-24 115.2 64 78.1
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 4.3e-24 115.2 64 78.1
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 5.6e-24 114.8 64 78.1
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 5.6e-24 114.8 73 74.0
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 5.6e-24 114.8 70 70.0
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 7.3e-24 114.4 71 73.2
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 7.3e-24 114.4 65 76.9
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 7.3e-24 114.4 65 75.4
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 9.6e-24 114.0 70 71.4
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 9.6e-24 114.0 65 75.4
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 1.2e-23 113.6 67 71.6
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 1.2e-23 113.6 65 73.8
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 6.2e-23 111.3 67 73.1
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 6.2e-23 111.3 64 73.4
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 1.4e-22 110.2 66 72.7
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 9.0e-22 107.5 75 68.0
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 9.0e-22 107.5 71 69.0
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 7.8e-18 94.4 56 75.0
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 3.9e-17 92.0 69 59.4
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 5.8e-13 78.2 66 50.0
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 9.9e-13 77.4 68 52.9


User provided reference genes

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