Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p15090 Brassica napus HOM05D000880 ORTHO05D014501 1.2e-24 115.5 54 100.0
C07p25280 Brassica napus HOM05D000426 ORTHO05D014501 4.4e-22 107.1 53 94.3
C07p40770 Brassica napus HOM05D000426 ORTHO05D014501 5.4e-20 100.1 53 88.7
A04p15050 Brassica napus HOM05D000880 ORTHO05D014501 1.1e-17 92.4 43 100.0
A09p11280 Brassica napus HOM05D000880 ORTHO05D004760 4.2e-17 90.5 44 95.5
BolC8t52610H Brassica oleracea HOM05D000880 ORTHO05D004760 9.5e-17 89.4 53 81.1
BcaC03g16814 Brassica carinata HOM05D000426 ORTHO05D014501 1.2e-16 89.0 54 83.3
BcaC02g09729 Brassica carinata HOM05D000880 ORTHO05D004760 2.8e-16 87.8 44 90.9
BolC4t25292H Brassica oleracea HOM05D000880 ORTHO05D004760 2.8e-16 87.8 51 80.4
BcaC07g42028 Brassica carinata HOM05D000880 ORTHO05D004760 4.7e-16 87.0 44 90.9
C02p30160 Brassica napus HOM05D000880 ORTHO05D004760 4.7e-16 87.0 43 93.0
C08p50820 Brassica napus HOM05D000880 ORTHO05D004760 4.7e-16 87.0 44 90.9
A04p00500 Brassica napus HOM05D000880 ORTHO05D004760 3.0e-15 84.3 44 88.6
Thhalv10025224m.g Eutrema salsugineum HOM05D000426 ORTHO05D000328 4.4e-14 80.5 51 76.5
BcaC09g50672 Brassica carinata HOM05D000426 ORTHO05D000328 7.5e-14 79.7 51 74.5
A01p17320 Brassica napus HOM05D000426 ORTHO05D000328 7.5e-14 79.7 51 74.5
C01p21820 Brassica napus HOM05D000426 ORTHO05D000328 7.5e-14 79.7 51 74.5
BolC1t02108H Brassica oleracea HOM05D000426 ORTHO05D000328 7.5e-14 79.7 51 74.5
BraA01t01687Z Brassica rapa HOM05D000426 ORTHO05D000328 7.5e-14 79.7 51 74.5
Sp7g24100 Schrenkiella parvula HOM05D000426 ORTHO05D000328 2.2e-13 78.2 51 76.5
BcaB03g12493 Brassica carinata HOM05D000426 ORTHO05D000328 2.8e-13 77.8 51 74.5
A03p56480 Brassica napus HOM05D000426 ORTHO05D000328 2.8e-13 77.8 51 74.5
BraA03t14719Z Brassica rapa HOM05D000426 ORTHO05D000328 2.8e-13 77.8 51 74.5
BcaC06g32769 Brassica carinata HOM05D000426 ORTHO05D000328 3.7e-13 77.4 51 74.5
BcaC07g38221 Brassica carinata HOM05D000426 ORTHO05D000328 3.7e-13 77.4 51 74.5
BcaNung05232 Brassica carinata HOM05D000426 ORTHO05D014501 3.7e-13 77.4 51 72.5
A08p20910 Brassica napus HOM05D000426 ORTHO05D000328 3.7e-13 77.4 51 74.5
C07p54700 Brassica napus HOM05D000426 ORTHO05D000328 3.7e-13 77.4 51 74.5
C08p09780 Brassica napus HOM05D000426 ORTHO05D000328 3.7e-13 77.4 51 74.5
BolC7t45959H Brassica oleracea HOM05D000426 ORTHO05D000328 3.7e-13 77.4 51 74.5
BolC8t48649H Brassica oleracea HOM05D000426 ORTHO05D000328 3.7e-13 77.4 51 74.5
BraA08t34044Z Brassica rapa HOM05D000426 ORTHO05D000328 3.7e-13 77.4 51 74.5
Carub.0007s1487 Capsella rubella HOM05D000426 ORTHO05D000328 1.8e-12 75.1 51 72.5
AL7G26900 Arabidopsis lyrata HOM05D000426 ORTHO05D000328 4.1e-12 73.9 51 70.6
AT4G26080 Arabidopsis thaliana HOM05D000426 ORTHO05D000328 5.4e-12 73.6 51 70.6
BolC6t37843H Brassica oleracea HOM05D000426 ORTHO05D014501 5.4e-12 73.6 47 76.6
BcaC08g45058 Brassica carinata HOM05D000426 ORTHO05D014501 7.0e-12 73.2 47 76.6
BolC7t41999H Brassica oleracea HOM05D000426 ORTHO05D014501 7.0e-12 73.2 47 76.6
BolC2t10735H Brassica oleracea HOM05D000426 ORTHO05D014501 2.0e-11 71.6 51 70.6
BolC4t27729H Brassica oleracea HOM05D000426 ORTHO05D014501 2.0e-11 71.6 51 70.6
CARHR233590 Cardamine hirsuta HOM05D000426 ORTHO05D000328 7.8e-11 69.7 51 66.7
Aa31LG3G12950 Aethionema arabicum HOM05D000426 ORTHO05D000328 6.6e-10 66.6 55 65.5
Carub.0008s1756 Capsella rubella HOM05D000426 ORTHO05D000328 8.6e-10 66.2 55 63.6
Sp6g18770 Schrenkiella parvula HOM05D000426 ORTHO05D000328 8.6e-10 66.2 55 63.6
AL8G32960 Arabidopsis lyrata HOM05D000426 ORTHO05D000328 1.1e-09 65.9 55 63.6
CARHR270810 Cardamine hirsuta HOM05D000426 ORTHO05D000328 1.1e-09 65.9 55 63.6
Thhalv10013611m.g Eutrema salsugineum HOM05D000426 ORTHO05D000328 2.5e-09 64.7 55 63.6
AT5G57050 Arabidopsis thaliana HOM05D000426 ORTHO05D000328 4.3e-09 63.9 55 61.8
THA.LOC104813496 Tarenaya hassleriana HOM05D000426 ORTHO05D000328 2.1e-08 61.6 55 58.2
THA.LOC104817765 Tarenaya hassleriana HOM05D000426 ORTHO05D000328 2.8e-08 61.2 55 58.2
Aa31LG3G460 Aethionema arabicum HOM05D000426 ORTHO05D000328 8.9e-07 56.2 51 60.8
CiPaw.03G211400 Carya illinoinensis HOM05D000426 ORTHO05D000328 8.9e-07 56.2 58 53.4
RcHm_v2.0_Chr2g0094051 Rosa chinensis HOM05D000426 ORTHO05D000328 8.9e-07 56.2 55 56.4
MD15G1212000 Malus domestica HOM05D000426 ORTHO05D000328 1.2e-06 55.8 58 51.7
Nn8g38766 Nelumbo nucifera HOM05D000426 ORTHO05D000328 1.2e-06 55.8 58 53.4
THA.LOC104811756 Tarenaya hassleriana HOM05D000426 ORTHO05D000328 1.5e-06 55.5 55 54.5
Haze_18145 Corylus avellana HOM05D000426 ORTHO05D000328 2.0e-06 55.1 58 50.0
Medtr1g015110 Medicago truncatula HOM05D000426 ORTHO05D000328 2.0e-06 55.1 59 54.2
Lj7A680T76 Lonicera japonica HOM05D000426 ORTHO05D000328 2.6e-06 54.7 58 50.0
Potri.006G224600 Populus trichocarpa HOM05D000426 ORTHO05D000328 2.6e-06 54.7 58 50.0
TWI63G0951 Tripterygium wilfordii HOM05D000426 ORTHO05D000328 2.6e-06 54.7 58 50.0
Oeu018038.1 Olea europaea HOM05D000426 ORTHO05D000328 3.4e-06 54.3 58 51.7
TPR.G38910 Trifolium pratense HOM05D000426 ORTHO05D000328 3.4e-06 54.3 59 54.2
Prupe.7G204800 Prunus persica HOM05D000426 ORTHO05D000328 4.4e-06 53.9 58 50.0
FvH4_1g08010 Fragaria vesca HOM05D000426 ORTHO05D000328 5.8e-06 53.5 56 50.0
FAN19G0698 Fragaria x ananassa HOM05D000426 ORTHO05D000328 5.8e-06 53.5 56 50.0
TWI34G0417 Tripterygium wilfordii HOM05D000426 ORTHO05D000328 5.8e-06 53.5 58 50.0
CiPaw.16G026400 Carya illinoinensis HOM05D000426 ORTHO05D000328 7.5e-06 53.1 58 46.6
DCAR_007635 Daucus carota HOM05D000426 ORTHO05D000328 7.5e-06 53.1 58 46.6
FAN23G0539 Fragaria x ananassa HOM05D000426 ORTHO05D000328 7.5e-06 53.1 56 50.0
FAN26G0963 Fragaria x ananassa HOM05D000426 ORTHO05D000328 7.5e-06 53.1 56 50.0
FAN26G3399 Fragaria x ananassa HOM05D000426 ORTHO05D000328 7.5e-06 53.1 56 50.0
Psat6g023760 Pisum sativum HOM05D000426 ORTHO05D000328 7.5e-06 53.1 59 52.5
Atru.chr7.1644 Acer truncatum HOM05D000426 ORTHO05D000328 9.8e-06 52.8 58 50.0
BcaB08g36013 Brassica carinata HOM05D000426 ORTHO05D000328 9.8e-06 52.8 56 55.4
BcaC04g20018 Brassica carinata HOM05D000426 ORTHO05D000328 9.8e-06 52.8 56 55.4
A10p14380 Brassica napus HOM05D000426 ORTHO05D000328 9.8e-06 52.8 56 55.4
C09p48730 Brassica napus HOM05D000426 ORTHO05D000328 9.8e-06 52.8 56 55.4
BolC9t57721H Brassica oleracea HOM05D000426 ORTHO05D000328 9.8e-06 52.8 56 55.4
BraA10t43530Z Brassica rapa HOM05D000426 ORTHO05D000328 9.8e-06 52.8 56 55.4
Glyma.04G053800 Glycine max HOM05D000426 ORTHO05D000328 9.8e-06 52.8 58 50.0
PGR031G0651 Punica granatum HOM05D000426 ORTHO05D000328 9.8e-06 52.8 58 48.3


User provided reference genes

Program Settings