Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p14430 Brassica napus HOM05D000022 ORTHO05D009714 8.3e-69 263.5 123 100.0
Sp7g00650 Schrenkiella parvula HOM05D000022 ORTHO05D009714 1.3e-21 106.7 130 46.9
SpUn0010_0130 Schrenkiella parvula HOM05D000022 ORTHO05D009714 1.3e-21 106.7 130 46.9
Thhalv10027847m.g Eutrema salsugineum HOM05D000022 ORTHO05D009714 3.2e-20 102.1 130 46.2
AT5G41280 Arabidopsis thaliana HOM05D000022 ORTHO05D009714 3.6e-19 98.6 130 44.6
Carub.0007s3424 Capsella rubella HOM05D000022 ORTHO05D009714 1.5e-17 93.2 131 43.5
AL7G48170 Arabidopsis lyrata HOM05D000022 ORTHO05D009714 9.7e-17 90.5 130 41.5
CARHR213040 Cardamine hirsuta HOM05D000022 ORTHO05D009714 9.7e-17 90.5 130 40.8
Carub.0007s3422 Capsella rubella HOM05D000022 ORTHO05D009714 2.2e-16 89.4 130 41.5
AT5G41290 Arabidopsis thaliana HOM05D000022 ORTHO05D009714 5.3e-15 84.7 130 40.0
Thhalv10028233m.g Eutrema salsugineum HOM05D000022 ORTHO05D009714 6.9e-15 84.3 126 42.9
AT5G41300 Arabidopsis thaliana HOM05D000022 ORTHO05D009714 9.4e-12 73.9 127 36.2
AT1G63600 Arabidopsis thaliana HOM05D000022 ORTHO05D009714 1.4e-10 70.1 42 66.7
Carub.0002s0128 Capsella rubella HOM05D000022 ORTHO05D009714 3.9e-10 68.6 42 64.3
BcaB07g31564 Brassica carinata HOM05D000022 ORTHO05D009714 3.3e-09 65.5 45 57.8
BcaB07g31568 Brassica carinata HOM05D000022 ORTHO05D009714 3.3e-09 65.5 45 57.8
BcaB07g31576 Brassica carinata HOM05D000022 ORTHO05D009714 3.3e-09 65.5 45 57.8
Thhalv10028048m.g Eutrema salsugineum HOM05D000022 ORTHO05D009714 3.3e-09 65.5 45 57.8
Carub.0002s0130 Capsella rubella HOM05D000022 ORTHO05D009714 1.7e-08 63.2 128 35.2
AL2G11630 Arabidopsis lyrata HOM05D000022 ORTHO05D009714 2.8e-08 62.4 45 55.6
CARHR047750 Cardamine hirsuta HOM05D000022 ORTHO05D009714 8.2e-08 60.8 41 61.0
Thhalv10028207m.g Eutrema salsugineum HOM05D000022 ORTHO05D009714 1.4e-07 60.1 45 57.8
THA.LOC104823584 Tarenaya hassleriana HOM05D000022 ORTHO05D009714 1.8e-07 59.7 45 53.3
Sp2g01040 Schrenkiella parvula HOM05D000022 ORTHO05D009714 2.4e-07 59.3 45 51.1
AT1G63580 Arabidopsis thaliana HOM05D000022 ORTHO05D009714 3.1e-07 58.9 45 53.3
BcaC04g22494 Brassica carinata HOM05D000022 ORTHO05D009714 3.1e-07 58.9 45 51.1
Thhalv10023893m.g Eutrema salsugineum HOM05D000022 ORTHO05D009714 4.1e-07 58.5 45 51.1
BcaC04g22697 Brassica carinata HOM05D000022 ORTHO05D009714 5.3e-07 58.2 41 63.4
C09p16430 Brassica napus HOM05D000022 ORTHO05D009714 5.3e-07 58.2 41 63.4
BolC9t54553H Brassica oleracea HOM05D000022 ORTHO05D009714 5.3e-07 58.2 41 63.4
CARHR047770 Cardamine hirsuta HOM05D000022 ORTHO05D009714 5.3e-07 58.2 45 53.3
A09p15440 Brassica napus HOM05D000022 ORTHO05D009714 7.0e-07 57.8 45 48.9
C09p18700 Brassica napus HOM05D000022 ORTHO05D009714 7.0e-07 57.8 45 48.9
BolC9t54768H Brassica oleracea HOM05D000022 ORTHO05D009714 7.0e-07 57.8 45 48.9
BraA09t37185Z Brassica rapa HOM05D000022 ORTHO05D009714 7.0e-07 57.8 45 48.9
Carub.0002s0127 Capsella rubella HOM05D000022 ORTHO05D009714 2.0e-06 56.2 41 61.0
BcaB07g31405 Brassica carinata HOM05D000022 ORTHO05D009714 2.6e-06 55.8 45 48.9
Carub.0002s0132 Capsella rubella HOM05D000022 ORTHO05D009714 2.6e-06 55.8 45 46.7
Carub.0002s0129 Capsella rubella HOM05D000022 ORTHO05D009714 4.5e-06 55.1 44 52.3
Sp2g01060 Schrenkiella parvula HOM05D000022 ORTHO05D009714 4.5e-06 55.1 41 53.7
CARHR047800 Cardamine hirsuta HOM05D000022 ORTHO05D009714 5.9e-06 54.7 45 51.1
CARHR047820 Cardamine hirsuta HOM05D000022 ORTHO05D009714 7.7e-06 54.3 45 48.9


User provided reference genes

Program Settings