Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 2.0e-211 738.8 372 100.0
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 2.0e-211 738.8 372 100.0
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 5.6e-209 730.7 372 99.2
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 1.2e-203 713.0 372 97.0
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 2.1e-203 712.2 372 97.3
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 2.1e-203 712.2 372 97.3
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 1.8e-199 699.1 373 96.0
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 1.5e-193 679.5 376 92.8
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 6.4e-189 664.1 374 91.2
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 3.0e-186 655.2 373 90.1
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 2.1e-184 649.0 373 89.5
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 8.1e-184 647.1 374 90.1
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 1.1e-177 626.7 381 86.1
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 7.9e-171 604.0 377 83.6
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 8.2e-160 567.4 389 77.6
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 6.7e-154 547.7 375 75.7
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 1.3e-152 543.5 376 76.3
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 3.7e-152 542.0 376 76.6
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 5.3e-151 538.1 351 80.1
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.5e-150 536.6 376 76.1
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 3.4e-150 535.4 351 79.8
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 4.5e-150 535.0 347 80.4
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 7.7e-150 534.3 375 74.9
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 1.1e-148 530.4 373 74.3
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 1.9e-148 529.6 392 72.4
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 5.5e-148 528.1 378 74.6
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 7.2e-148 527.7 376 75.0
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 1.2e-147 526.9 375 73.9
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.6e-147 526.6 373 75.3
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 3.6e-147 525.4 379 73.6
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 4.6e-147 525.0 375 74.4
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 6.1e-147 524.6 382 72.8
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 7.9e-147 524.2 377 73.7
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 1.0e-146 523.9 377 74.0
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 1.4e-146 523.5 372 74.5
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 2.3e-146 522.7 365 75.6
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 5.1e-146 521.5 374 75.1
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.1e-145 520.4 380 74.5
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 2.0e-145 519.6 373 74.0
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 2.0e-145 519.6 373 74.0
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 2.6e-145 519.2 377 74.0
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 5.7e-145 518.1 361 75.3
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 9.7e-145 517.3 376 73.1
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 4.8e-144 515.0 377 72.7
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 6.3e-144 514.6 371 74.4
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 8.2e-144 514.2 392 71.4
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 2.4e-143 512.7 374 73.5
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 3.1e-143 512.3 372 73.4
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 6.9e-143 511.1 385 72.7
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 2.0e-142 509.6 372 72.0
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 3.4e-142 508.8 374 73.8
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 2.2e-141 506.1 372 72.0
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 2.9e-141 505.8 357 75.9
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 2.9e-141 505.8 372 72.0
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 1.4e-140 503.4 372 74.2
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 2.5e-140 502.7 372 72.8
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 3.2e-140 502.3 372 71.8
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 5.5e-140 501.5 334 78.1
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 7.2e-140 501.1 369 72.4
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 7.2e-140 501.1 378 70.4
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 1.2e-139 500.4 349 75.9
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 1.6e-139 500.0 364 72.8
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 6.1e-139 498.0 379 71.5
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 1.0e-138 497.3 335 76.4
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 1.4e-138 496.9 335 78.2
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 1.4e-138 496.9 355 74.9
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 2.3e-138 496.1 369 72.9
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 3.0e-138 495.7 358 72.9
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 8.8e-138 494.2 336 77.1
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 8.8e-138 494.2 378 71.4
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 1.1e-137 493.8 336 77.7
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 2.6e-137 492.7 400 68.8
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.4e-137 491.9 368 72.0
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 7.4e-137 491.1 368 71.7
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 1.7e-136 490.0 392 68.1
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 3.7e-136 488.8 370 72.2
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 6.3e-136 488.0 360 74.2
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 8.2e-136 487.6 412 66.3
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 1.4e-135 486.9 382 70.2
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 7.0e-135 484.6 330 76.4
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 1.6e-134 483.4 373 70.5
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 5.9e-134 481.5 330 76.1
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 1.0e-133 480.7 351 72.6
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 1.3e-133 480.3 378 68.8
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 1.1e-132 477.2 335 75.5
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 1.1e-132 477.2 375 68.5
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 5.5e-132 474.9 336 73.2
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 1.0e-130 470.7 344 72.7
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 5.2e-130 468.4 279 86.4
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 4.4e-129 465.3 364 70.3
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 7.5e-129 464.5 352 69.6
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 2.8e-128 462.6 371 66.8
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.4e-127 460.3 327 76.1
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 1.8e-127 459.9 375 67.5
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 2.4e-127 459.5 327 76.1
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 5.3e-127 458.4 368 68.8
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 4.5e-126 455.3 373 66.5
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 2.9e-125 452.6 325 74.8
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 8.0e-123 444.5 349 69.6
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 1.0e-122 444.1 287 80.8
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 2.0e-118 429.9 382 63.6
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 4.4e-113 412.1 335 65.7
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 5.7e-113 411.8 291 73.5
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 4.9e-112 408.7 340 66.5
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 1.3e-109 400.6 279 72.0
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 1.2e-107 394.0 327 63.3
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 4.7e-107 392.1 233 85.4
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 9.8e-105 384.4 282 68.8
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 1.4e-95 354.0 299 65.9
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 7.0e-95 351.7 327 60.9
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 6.6e-93 345.1 207 83.6
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 1.5e-84 317.4 266 62.0
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 1.6e-83 313.9 261 59.0
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 5.2e-82 308.9 254 59.8
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 3.4e-81 306.2 277 60.6
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 9.9e-81 304.7 238 70.2
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 8.4e-72 275.0 238 66.4
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 2.8e-67 260.0 209 68.4
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 3.6e-67 259.6 237 59.9
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 1.9e-60 237.3 158 78.5
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 7.4e-52 208.8 188 62.2
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 2.1e-51 207.2 210 55.7
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 3.7e-51 206.5 183 63.4
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 2.4e-50 203.8 183 63.4
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 2.4e-50 203.8 190 62.6
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 4.0e-50 203.0 117 87.2
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 1.1e-47 194.9 117 82.1
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 2.7e-46 190.3 137 75.2
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 2.6e-33 147.1 109 67.9
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 2.9e-32 143.7 242 36.8
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 3.8e-32 143.3 245 36.7
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 6.3e-27 125.9 158 48.1
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 5.9e-25 119.4 189 43.9
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 2.7e-22 110.5 167 40.1
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 8.0e-22 109.0 75 74.7
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 7.4e-20 102.4 242 30.2
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 1.8e-18 97.8 50 94.0
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.5e-17 93.2 74 64.9
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 1.1e-15 88.6 108 49.1
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 5.7e-12 76.3 84 50.0


User provided reference genes

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