Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p13250 Brassica napus HOM05D059784 ORTHO05D040438 1.9e-77 292.4 141 100.0
BraA04t16983Z Brassica rapa HOM05D059784 ORTHO05D040438 1.3e-25 120.2 61 95.1
Carub.0001s2390 Capsella rubella HOM05D005453 ORTHO05D006520 5.0e-09 65.1 49 67.3
BcaB07g32384 Brassica carinata HOM05D005453 ORTHO05D006520 8.5e-09 64.3 49 67.3
BcaC05g26346 Brassica carinata HOM05D005453 ORTHO05D006520 1.5e-08 63.5 49 67.3
A09p40480 Brassica napus HOM05D003373 ORTHO05D004419 1.5e-08 63.5 49 67.3
C05p23700 Brassica napus HOM05D003373 ORTHO05D004419 1.5e-08 63.5 49 67.3
BolC5t31089H Brassica oleracea HOM05D005453 ORTHO05D006520 1.5e-08 63.5 49 67.3
BraA09t39545Z Brassica rapa HOM05D003373 ORTHO05D006520 1.5e-08 63.5 49 67.3
AT1G27070 Arabidopsis thaliana HOM05D005453 ORTHO05D006520 4.2e-08 62.0 49 63.3
CARHR024830 Cardamine hirsuta HOM05D005453 ORTHO05D006520 7.2e-08 61.2 49 61.2
Sp1g21710 Schrenkiella parvula HOM05D005453 ORTHO05D006520 9.4e-08 60.8 48 66.7
Aa31LG7G8080 Aethionema arabicum HOM05D005453 ORTHO05D006520 3.6e-07 58.9 48 62.5
MD13G1079900 Malus domestica HOM05D005453 ORTHO05D006520 4.0e-06 55.5 47 55.3


User provided reference genes

Program Settings