Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 5.4e-192 674.1 322 100.0
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 4.2e-189 664.5 330 97.3
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 6.2e-164 580.9 317 91.2
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 3.1e-163 578.6 317 90.9
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 9.0e-147 523.9 252 99.6
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 6.4e-145 517.7 252 98.0
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 1.0e-134 483.8 252 90.1
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 2.3e-134 482.6 252 90.1
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 3.8e-129 465.3 252 85.3
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 4.2e-128 461.8 253 86.2
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 1.8e-126 456.4 252 85.3
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 3.9e-126 455.3 252 83.7
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 8.4e-121 437.6 252 79.8
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 5.3e-115 418.3 250 76.8
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 5.0e-105 385.2 252 70.2
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 1.8e-102 376.7 252 69.0
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 3.9e-102 375.6 252 67.9
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.1e-101 374.0 252 67.1
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.5e-101 373.6 252 67.5
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.5e-101 373.6 252 67.5
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 9.7e-101 370.9 252 67.5
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 9.7e-101 370.9 253 66.4
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 1.3e-100 370.5 253 67.2
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 3.7e-100 369.0 252 66.3
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 6.3e-100 368.2 252 67.1
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.8e-99 366.7 253 65.6
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 3.1e-99 365.9 254 65.7
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 9.1e-99 364.4 249 65.9
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 9.1e-99 364.4 246 67.5
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 1.2e-98 364.0 254 65.4
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.2e-98 364.0 253 65.6
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 1.2e-98 364.0 252 64.7
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 1.6e-98 363.6 252 65.9
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 2.0e-98 363.2 248 66.9
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 2.0e-98 363.2 252 66.3
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 3.5e-98 362.5 252 65.5
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 4.5e-98 362.1 252 65.9
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 1.3e-97 360.5 252 65.1
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 1.3e-97 360.5 252 65.9
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 2.2e-97 359.8 252 64.3
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 2.9e-97 359.4 256 65.6
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 2.9e-97 359.4 252 65.1
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 3.8e-97 359.0 252 64.7
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 3.8e-97 359.0 254 63.4
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 8.5e-97 357.8 252 65.9
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 1.5e-96 357.1 253 65.6
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 1.5e-96 357.1 252 65.5
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 5.5e-96 355.1 254 65.0
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 5.5e-96 355.1 252 63.9
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 9.4e-96 354.4 254 64.6
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 1.2e-95 354.0 254 64.2
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 1.6e-95 353.6 253 64.8
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 3.6e-95 352.4 252 63.9
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 4.7e-95 352.1 249 64.7
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 6.1e-95 351.7 252 63.5
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 1.8e-94 350.1 253 64.0
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 1.8e-94 350.1 248 64.5
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 3.0e-94 349.4 252 62.7
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 3.0e-94 349.4 252 63.1
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 1.1e-93 347.4 252 62.3
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 2.0e-93 346.7 254 62.6
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 2.0e-93 346.7 248 63.3
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 3.3e-93 345.9 254 63.4
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 3.3e-93 345.9 252 62.3
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 3.3e-93 345.9 253 63.2
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 4.4e-93 345.5 255 62.4
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 4.4e-93 345.5 252 64.3
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 5.7e-93 345.1 253 62.8
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 2.2e-92 343.2 252 63.5
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 4.8e-92 342.0 253 62.5
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 8.2e-92 341.3 265 60.4
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 1.4e-91 340.5 254 61.8
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 1.4e-91 340.5 253 62.1
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 2.4e-91 339.7 254 61.4
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 3.1e-91 339.3 253 61.3
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 4.1e-91 339.0 252 63.5
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 1.6e-90 337.0 252 60.3
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 2.0e-90 336.7 247 63.2
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 2.7e-90 336.3 252 61.9
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 3.5e-90 335.9 249 61.4
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 4.5e-90 335.5 252 62.3
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 4.5e-90 335.5 252 63.1
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 1.7e-89 333.6 248 60.9
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 2.9e-89 332.8 247 61.9
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 5.5e-88 328.6 251 59.4
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 7.2e-88 328.2 252 60.7
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 6.1e-87 325.1 252 59.1
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 1.8e-86 323.6 253 60.5
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 1.8e-86 323.6 253 58.9
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 3.0e-86 322.8 252 62.3
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 3.0e-86 322.8 252 61.9
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 5.7e-85 318.5 252 57.9
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 1.3e-84 317.4 264 58.3
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 4.5e-82 308.9 252 56.3
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 7.7e-82 308.1 230 60.9
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 4.0e-78 295.8 248 54.8
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 8.8e-78 294.7 239 54.0
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 4.4e-77 292.4 244 57.4
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 8.3e-76 288.1 203 62.1
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 5.6e-72 275.4 250 50.0
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 2.8e-71 273.1 252 52.8
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 4.7e-71 272.3 253 49.8
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 8.0e-71 271.6 251 53.0
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 2.9e-68 263.1 247 53.4
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 5.6e-64 248.8 252 48.4
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 2.0e-61 240.4 251 46.2
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 8.3e-60 235.0 269 45.7
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 9.5e-56 221.5 151 62.3
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 5.1e-49 199.1 136 70.6
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 1.8e-46 190.7 281 41.3
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 1.7e-41 174.1 260 40.8
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 1.5e-40 171.0 111 64.9
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 4.0e-38 162.9 101 77.2
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 2.1e-31 140.6 97 69.1
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 1.9e-19 100.9 70 54.3
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 6.0e-18 95.9 89 56.2
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 2.3e-17 94.0 155 39.4
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 3.0e-17 93.6 54 64.8
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 3.3e-16 90.1 49 69.4
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 1.1e-14 85.1 45 82.2
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 2.8e-07 60.5 120 34.2


User provided reference genes

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