Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p11630 Brassica napus HOM05D012419 ORTHO05D014425 1.1e-50 203.0 101 100.0
BraA04t16831Z Brassica rapa HOM05D012419 ORTHO05D014425 1.1e-50 203.0 101 100.0
BcaC02g09667 Brassica carinata HOM05D012419 ORTHO05D014425 3.2e-50 201.4 101 99.0
C04p45360 Brassica napus HOM05D012419 ORTHO05D014425 3.2e-50 201.4 101 99.0
BolC4t26118H Brassica oleracea HOM05D012419 ORTHO05D014425 3.2e-50 201.4 101 99.0
SpUn0124_0010 Schrenkiella parvula HOM05D012419 ORTHO05D014425 1.0e-43 179.9 101 88.1
SpUn0185_0010 Schrenkiella parvula HOM05D012419 ORTHO05D014425 1.0e-43 179.9 101 88.1
Thhalv10028105m.g Eutrema salsugineum HOM05D012419 ORTHO05D014425 7.9e-41 170.2 101 84.2
BcaB06g27241 Brassica carinata HOM05D012419 ORTHO05D014425 1.8e-37 159.1 89 88.8
AL7G51670 Arabidopsis lyrata HOM05D012419 ORTHO05D014425 1.0e-35 153.3 101 75.2
Carub.0007s3710 Capsella rubella HOM05D012419 ORTHO05D014425 2.3e-32 142.1 101 70.3
CARHR264040 Cardamine hirsuta HOM05D012419 ORTHO05D014425 3.0e-32 141.7 101 71.3
CARHR291810 Cardamine hirsuta HOM05D012419 ORTHO05D014425 7.4e-31 137.1 101 69.3
AT5G38770 Arabidopsis thaliana HOM05D012419 ORTHO05D014425 2.2e-30 135.6 101 68.3
Aa31LG9G16890 Aethionema arabicum HOM05D000926 ORTHO05D000707 3.6e-17 91.7 100 48.0
THA.LOC109116337 Tarenaya hassleriana HOM05D000926 ORTHO05D000707 1.5e-15 86.3 105 48.6
Duzib138G1671 Durio zibethinus HOM05D000926 ORTHO05D000707 2.7e-09 65.5 77 42.9
Potri.017G107200 Populus trichocarpa HOM05D000926 ORTHO05D000707 2.7e-09 65.5 81 43.2
Rhsim08G0078900 Rhododendron simsii HOM05D000926 ORTHO05D000707 6.1e-09 64.3 79 48.1
QL02p063891 Quercus lobata HOM05D000926 ORTHO05D000707 1.0e-08 63.5 91 37.4
Gohir.D07G185000 Gossypium hirsutum HOM05D000926 ORTHO05D000707 1.4e-08 63.2 80 41.2
Gorai.001G205500 Gossypium raimondii HOM05D000926 ORTHO05D000707 1.4e-08 63.2 80 41.2
Cfa007731 Carpinus fangiana HOM05D000926 ORTHO05D000707 1.8e-08 62.8 85 37.6
Potri.017G107300 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.8e-08 62.8 83 44.6
Sabra17G0090100 Salix brachista HOM05D000926 ORTHO05D000707 1.8e-08 62.8 79 48.1
Thecc.04G113000 Theobroma cacao HOM05D000926 ORTHO05D000707 1.8e-08 62.8 77 45.5
Haze_14349 Corylus avellana HOM05D000926 ORTHO05D000707 4.0e-08 61.6 76 42.1
ATR0691G108 Amborella trichopoda HOM05D000926 ORTHO05D000707 5.2e-08 61.2 85 41.2
Manes.02G062400 Manihot esculenta HOM05D000926 ORTHO05D000707 6.7e-08 60.8 81 44.4
Potri.004G108440 Populus trichocarpa HOM05D000926 ORTHO05D000707 6.7e-08 60.8 102 38.2
Eucgr.J01435 Eucalyptus grandis HOM05D000926 ORTHO05D000707 8.8e-08 60.5 77 42.9
Potri.004G108680 Populus trichocarpa HOM05D000926 ORTHO05D000707 8.8e-08 60.5 96 39.6
TAR374G1048 Trochodendron aralioides HOM05D000926 ORTHO05D000707 8.8e-08 60.5 80 41.2
Sabra04G0074000 Salix brachista HOM05D000926 ORTHO05D000707 1.1e-07 60.1 94 40.4
Eucgr.J01437 Eucalyptus grandis HOM05D000926 ORTHO05D000707 1.5e-07 59.7 66 42.4
Ciclev10013138m.g Citrus clementina HOM05D000926 ORTHO05D000707 2.6e-07 58.9 81 42.0
Duzib211G0100 Durio zibethinus HOM05D000926 ORTHO05D000707 2.6e-07 58.9 77 44.2
Manes.02G062600 Manihot esculenta HOM05D000926 ORTHO05D000707 2.6e-07 58.9 78 39.7
Dinv01321 Davidia involucrata HOM05D000054 ORTHO05D000171 3.3e-07 58.5 81 43.2
Gohir.A07G178200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 5.7e-07 57.8 80 37.5
Potri.017G107400 Populus trichocarpa HOM05D000926 ORTHO05D000707 5.7e-07 57.8 91 38.5
Manes.01G105900 Manihot esculenta HOM05D000926 ORTHO05D000707 9.7e-07 57.0 80 38.8
Oeu049341.1 Olea europaea HOM05D000926 ORTHO05D000707 9.7e-07 57.0 100 36.0
Aqoxy3G00596 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 1.3e-06 56.6 80 40.0
CSS0017323 Camellia sinensis var. sinensis HOM05D000926 ORTHO05D000707 2.2e-06 55.8 92 38.0
Medtr6g016480 Medicago truncatula HOM05D000926 ORTHO05D000707 2.2e-06 55.8 66 40.9
Psat1g064600 Pisum sativum HOM05D000926 ORTHO05D000707 2.2e-06 55.8 78 39.7
Lalb_Chr10g0092471 Lupinus albus HOM05D000926 ORTHO05D000707 2.8e-06 55.5 83 41.0
Aqoxy3G03797 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 4.8e-06 54.7 79 44.3
CiPaw.03G080100 Carya illinoinensis HOM05D000926 ORTHO05D000707 4.8e-06 54.7 99 34.3
TAR629G1973 Trochodendron aralioides HOM05D000926 ORTHO05D000707 6.3e-06 54.3 82 42.7
MSTRG.2959 Avicennia marina HOM05D000926 ORTHO05D000707 8.2e-06 53.9 91 35.2
Hma1.2p1_0588F.1_g184540 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 8.2e-06 53.9 79 41.8


User provided reference genes

Program Settings