Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p11370 Brassica napus HOM05D000017 ORTHO05D000013 2.5e-46 188.3 90 100.0
BraA04t16799Z Brassica rapa HOM05D000017 ORTHO05D000013 2.5e-46 188.3 90 100.0
A09p28370 Brassica napus HOM05D000017 ORTHO05D000013 6.4e-18 94.0 54 81.5
C05p37170 Brassica napus HOM05D017180 ORTHO05D000013 7.1e-17 90.5 54 77.8
BraA01t02124Z Brassica rapa HOM05D000017 ORTHO05D000013 1.6e-16 89.4 54 75.9
A06p16010 Brassica napus HOM05D000017 ORTHO05D000013 1.7e-15 85.9 53 71.7
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 9.6e-14 80.1 53 69.8
C09p26120 Brassica napus HOM05D000017 ORTHO05D000013 1.6e-13 79.3 78 56.4
BolC9t55515H Brassica oleracea HOM05D000017 ORTHO05D000013 1.6e-13 79.3 78 56.4
BolC7t41625H Brassica oleracea HOM05D000017 ORTHO05D000013 2.1e-13 79.0 54 68.5
A02p27280 Brassica napus HOM05D000017 ORTHO05D000013 2.8e-13 78.6 57 66.7
C07p15550 Brassica napus HOM05D017180 ORTHO05D000013 2.8e-13 78.6 54 66.7
BolC7t42042H Brassica oleracea HOM05D017180 ORTHO05D000013 2.8e-13 78.6 54 66.7
BraA02t07753Z Brassica rapa HOM05D000017 ORTHO05D000013 2.8e-13 78.6 58 65.5
C06p10560 Brassica napus HOM05D000017 ORTHO05D000013 3.6e-13 78.2 54 68.5
BolC6t36137H Brassica oleracea HOM05D000017 ORTHO05D000013 3.6e-13 78.2 54 68.5
C07p09740 Brassica napus HOM05D000017 ORTHO05D000013 8.1e-13 77.0 53 67.9
BolC7t41412H Brassica oleracea HOM05D017180 ORTHO05D000013 8.1e-13 77.0 53 67.9
A01p24500 Brassica napus HOM05D000017 ORTHO05D000013 1.1e-12 76.6 54 63.0
A08p09560 Brassica napus HOM05D000017 ORTHO05D000013 1.8e-12 75.9 53 66.0
A02p37010 Brassica napus HOM05D000017 ORTHO05D000013 3.1e-12 75.1 53 67.9
BraA02t08688Z Brassica rapa HOM05D000017 ORTHO05D000013 3.1e-12 75.1 53 67.9
BraA03t09392Z Brassica rapa HOM05D000017 ORTHO05D000013 3.1e-12 75.1 90 45.6
BraA08t34503Z Brassica rapa HOM05D000017 ORTHO05D000013 6.9e-12 73.9 53 67.9
BolC7t43637H Brassica oleracea HOM05D000017 ORTHO05D000013 9.0e-12 73.6 53 64.2
BolC8t47415H Brassica oleracea HOM05D000017 ORTHO05D000013 1.5e-11 72.8 53 64.2
BraA05t19812Z Brassica rapa HOM05D000017 ORTHO05D000013 4.4e-11 71.2 88 48.9
C08p05910 Brassica napus HOM05D000017 ORTHO05D000013 5.8e-11 70.9 53 62.3
BraA10t43041Z Brassica rapa HOM05D000017 ORTHO05D000013 2.9e-10 68.6 51 66.7
Sp5g23320 Schrenkiella parvula HOM05D007915 ORTHO05D010216 3.8e-10 68.2 57 56.1
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 4.9e-10 67.8 53 60.4
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 1.1e-09 66.6 53 60.4
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 1.1e-09 66.6 53 60.4
BolC9t58940H Brassica oleracea HOM05D000017 ORTHO05D000013 1.9e-09 65.9 51 62.7
BraA07t28815Z Brassica rapa HOM05D000017 ORTHO05D000013 2.4e-09 65.5 62 58.1
BolC1t02114H Brassica oleracea HOM05D000017 ORTHO05D000013 3.2e-09 65.1 63 50.8
C03p31490 Brassica napus HOM05D000017 ORTHO05D000013 7.1e-09 63.9 53 66.0
BolC3t15495H Brassica oleracea HOM05D000017 ORTHO05D000013 7.1e-09 63.9 53 66.0
MBI02_g40783_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 2.1e-08 62.4 70 45.7
Sp6g12430 Schrenkiella parvula HOM05D007915 ORTHO05D010216 3.5e-08 61.6 57 49.1
TAR239G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.3e-07 59.7 87 41.4
TAR423G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.3e-07 59.7 87 41.4
C07p07490 Brassica napus HOM05D000017 ORTHO05D000013 6.6e-07 57.4 53 56.6
C09p42350 Brassica napus HOM05D009117 ORTHO05D000013 8.7e-07 57.0 52 50.0
BolC9t57114H Brassica oleracea HOM05D009117 ORTHO05D000013 8.7e-07 57.0 52 50.0
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 1.9e-06 55.8 36 69.4
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 1.9e-06 55.8 36 69.4
MBI05_g12020_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.9e-06 55.8 70 44.3
TWI18G0395 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.5e-06 55.5 67 44.8
TWI77G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.5e-06 55.5 67 44.8
CSS0010669 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.3e-06 55.1 54 55.6
A07p43380 Brassica napus HOM05D009117 ORTHO05D024074 4.3e-06 54.7 55 50.9
BraA07t28476Z Brassica rapa HOM05D000017 ORTHO05D000013 4.3e-06 54.7 53 54.7
MBI16_g15551_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 5.6e-06 54.3 69 43.5
Rhsim04G0195500 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.6e-06 54.3 55 54.5
BolC3t14875H Brassica oleracea HOM05D000017 ORTHO05D000013 7.3e-06 53.9 52 53.8
TWI77G0635 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 7.3e-06 53.9 67 44.8
BolC2t12305H Brassica oleracea HOM05D006142 ORTHO05D000013 9.6e-06 53.5 56 50.0
MBI05_g05139_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 9.6e-06 53.5 69 43.5
TAR059G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 9.6e-06 53.5 54 50.0


User provided reference genes

Program Settings