Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 5.9e-164 580.9 310 100.0
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 4.6e-156 554.7 310 96.5
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 1.1e-152 543.5 310 94.5
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 1.1e-152 543.5 310 94.5
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 6.8e-152 540.8 310 94.2
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 3.4e-135 485.3 307 86.3
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 1.1e-133 480.3 308 86.4
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 2.1e-124 449.5 308 80.8
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 7.9e-124 447.6 310 81.3
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 4.3e-122 441.8 309 79.6
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 4.8e-121 438.3 310 79.4
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 1.0e-110 404.1 310 74.8
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 2.5e-109 399.4 324 70.7
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 6.1e-100 368.2 305 65.6
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 8.7e-99 364.4 306 65.7
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 3.1e-96 355.9 305 65.2
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 3.1e-96 355.9 281 69.0
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 4.1e-96 355.5 306 63.7
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.2e-95 354.0 312 65.1
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 1.2e-95 354.0 281 68.7
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 3.4e-95 352.4 281 68.3
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 1.9e-93 346.7 310 62.3
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 3.2e-93 345.9 313 63.3
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 5.5e-93 345.1 309 62.5
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 6.1e-92 341.7 309 62.1
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 1.4e-91 340.5 278 66.2
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 3.0e-91 339.3 310 63.9
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 1.5e-90 337.0 281 64.8
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 2.6e-90 336.3 281 64.1
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 3.3e-90 335.9 311 63.0
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 4.4e-90 335.5 285 64.9
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 7.4e-90 334.7 302 61.3
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 1.7e-89 333.6 284 63.7
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 2.4e-88 329.7 321 60.7
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 5.3e-88 328.6 283 63.3
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 6.9e-88 328.2 288 62.8
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 2.0e-87 326.6 258 66.7
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 2.6e-87 326.2 309 61.5
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 2.6e-87 326.2 305 63.0
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 1.0e-86 324.3 284 62.0
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 1.3e-86 323.9 286 61.9
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 2.2e-86 323.2 281 63.0
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 3.8e-86 322.4 262 66.8
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 8.5e-86 321.2 274 63.9
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 1.4e-85 320.5 307 58.6
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 5.5e-85 318.5 299 61.2
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 9.4e-85 317.8 259 65.3
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 2.1e-84 316.6 305 61.6
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 4.7e-84 315.5 311 60.1
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 1.4e-83 313.9 265 64.5
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 3.9e-83 312.4 270 63.3
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 8.8e-83 311.2 306 57.5
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 1.1e-82 310.8 306 57.5
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 5.7e-82 308.5 270 63.0
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 9.7e-82 307.8 282 61.3
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 2.2e-81 306.6 261 65.1
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 6.3e-81 305.1 302 59.9
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 6.3e-81 305.1 280 61.1
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 1.4e-80 303.9 309 57.9
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 2.4e-80 303.1 295 58.6
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 3.1e-80 302.8 280 62.9
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 5.3e-80 302.0 276 61.6
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 5.9e-79 298.5 253 64.0
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 5.9e-79 298.5 296 57.8
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 1.7e-78 297.0 307 56.0
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 6.5e-78 295.0 308 57.5
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.1e-77 294.3 215 71.6
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.9e-77 293.5 330 55.2
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 2.5e-77 293.1 225 68.9
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.5e-77 293.1 324 54.0
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 5.5e-77 292.0 313 56.2
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 9.4e-77 291.2 302 55.3
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.7e-76 289.7 271 59.0
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.6e-76 289.3 330 54.5
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 3.6e-76 289.3 272 59.6
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 6.1e-76 288.5 304 55.3
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 1.0e-75 287.7 301 56.1
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 3.3e-74 282.7 305 54.4
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 2.7e-71 273.1 342 50.3
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 4.5e-71 272.3 211 68.7
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.3e-70 270.8 301 52.8
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 1.7e-70 270.4 229 63.8
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 5.0e-70 268.9 355 48.7
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 1.4e-67 260.8 258 55.4
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 1.8e-67 260.4 309 52.4
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 2.3e-67 260.0 270 55.2
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 2.3e-67 260.0 274 56.6
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 1.2e-66 257.7 222 65.3
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 2.0e-66 256.9 297 51.2
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.6e-63 247.3 254 58.7
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 2.8e-60 236.5 189 67.7
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 3.0e-59 233.0 218 61.9
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 2.0e-58 230.3 307 51.1
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 3.7e-57 226.1 270 51.9
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 3.8e-54 216.1 220 58.6
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 9.8e-50 201.4 249 44.2
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 1.7e-49 200.7 328 43.9
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 2.0e-47 193.7 214 50.0
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 6.6e-46 188.7 196 59.7
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 7.3e-45 185.3 150 66.0
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 3.4e-42 176.4 239 43.1
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 2.3e-38 163.7 165 61.8
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 4.3e-37 159.5 252 38.9
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 3.1e-35 153.3 158 51.9
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 8.9e-35 151.8 133 63.2
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 4.6e-31 139.4 115 61.7
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 6.0e-31 139.0 231 42.4
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.3e-30 137.9 130 53.8
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 6.6e-30 135.6 127 60.6
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 2.1e-28 130.6 118 61.9
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 2.8e-28 130.2 119 61.3
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.6e-28 129.8 116 59.5
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 8.9e-27 125.2 210 41.9
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.1e-24 118.2 118 55.1
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.8e-19 100.9 117 53.8
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 5.4e-16 89.4 84 53.6
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 2.1e-15 87.4 81 55.6
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 4.9e-09 66.2 42 71.4
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.6e-07 59.7 116 37.1
FAN21G2408 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.0e-06 58.5 61 57.4
FAN16G0199 Fragaria x ananassa HOM05D000780 ORTHO05D210745 3.0e-06 57.0 82 41.5
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.0e-06 57.0 58 55.2


User provided reference genes

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