Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p10520 Brassica napus HOM05D004462 ORTHO05D005231 1.1e-78 296.6 146 100.0
C04p44160 Brassica napus HOM05D004462 ORTHO05D005231 4.0e-78 294.7 146 99.3
BcaC02g09558 Brassica carinata HOM05D004462 ORTHO05D005231 1.2e-77 293.1 146 98.6
BraA04t16718Z Brassica rapa HOM05D004462 ORTHO05D005231 3.2e-75 285.0 165 88.5
CARHR215890 Cardamine hirsuta HOM05D004462 ORTHO05D005231 1.9e-72 275.8 146 91.8
Sp7g05300 Schrenkiella parvula HOM05D004462 ORTHO05D005231 2.8e-71 271.9 146 90.4
Thhalv10027981m.g Eutrema salsugineum HOM05D004462 ORTHO05D005231 8.1e-71 270.4 146 89.7
BolC4t25991H Brassica oleracea HOM05D004462 ORTHO05D005231 1.1e-67 260.0 210 68.6
A06p23000 Brassica napus HOM05D004462 ORTHO05D005231 7.8e-66 253.8 146 81.5
Carub.0002s1171 Capsella rubella HOM05D004462 ORTHO05D005231 1.0e-65 253.4 146 81.5
AT1G65820 Arabidopsis thaliana HOM05D004462 ORTHO05D005231 1.3e-65 253.1 145 82.8
BcaB04g19159 Brassica carinata HOM05D004462 ORTHO05D005231 1.5e-64 249.6 146 78.1
AL2G23110 Arabidopsis lyrata HOM05D004462 ORTHO05D005231 3.3e-64 248.4 145 80.0
BcaB05g24136 Brassica carinata HOM05D004462 ORTHO05D005231 5.6e-64 247.7 146 79.5
BcaC03g14720 Brassica carinata HOM05D004462 ORTHO05D005231 9.6e-64 246.9 146 78.8
A02p13370 Brassica napus HOM05D004462 ORTHO05D005231 9.6e-64 246.9 146 78.8
C02p21630 Brassica napus HOM05D004462 ORTHO05D005231 9.6e-64 246.9 146 78.8
Sp5g20770 Schrenkiella parvula HOM05D004462 ORTHO05D005231 6.2e-63 244.2 146 78.1
Carub.0007s3236 Capsella rubella HOM05D004462 ORTHO05D005231 1.1e-62 243.4 147 83.0
BraA02t06395Z Brassica rapa HOM05D004462 ORTHO05D005231 6.9e-62 240.7 151 76.2
CARHR057680 Cardamine hirsuta HOM05D004462 ORTHO05D005231 9.0e-62 240.4 143 77.6
Thecc.08G108000 Theobroma cacao HOM05D004462 ORTHO05D005231 2.0e-61 239.2 140 77.9
PGR044G0250 Punica granatum HOM05D004462 ORTHO05D005231 2.6e-61 238.8 143 79.0
COL.COLO4_16416 Corchorus olitorius HOM05D004462 ORTHO05D005231 7.6e-61 237.3 140 79.3
Eucgr.F02921 Eucalyptus grandis HOM05D004462 ORTHO05D005231 7.6e-61 237.3 141 78.0
THA.LOC104805662 Tarenaya hassleriana HOM05D004462 ORTHO05D005231 9.9e-61 236.9 146 77.4
BolC2t08300H Brassica oleracea HOM05D004462 ORTHO05D005231 1.3e-60 236.5 162 71.0
Duzib138G0229 Durio zibethinus HOM05D004462 ORTHO05D005231 1.3e-60 236.5 140 78.6
EL10Ac4g08901 Beta vulgaris HOM05D004462 ORTHO05D005231 2.9e-60 235.3 140 77.1
Aa31LG2G2630 Aethionema arabicum HOM05D000188 ORTHO05D000362 6.4e-60 234.2 174 69.0
AUR62037507 Chenopodium quinoa HOM05D004462 ORTHO05D005231 8.4e-60 233.8 140 77.1
QL02p063959 Quercus lobata HOM05D004462 ORTHO05D005231 8.4e-60 233.8 138 79.0
Cfa007736 Carpinus fangiana HOM05D004462 ORTHO05D005231 1.1e-59 233.4 138 78.3
Sc09g0004600 Simmondsia chinensis HOM05D004462 ORTHO05D005231 1.1e-59 233.4 138 77.5
Ciclev10013005m.g Citrus clementina HOM05D004462 ORTHO05D005231 2.4e-59 232.3 140 75.7
Haze_14345 Corylus avellana HOM05D004462 ORTHO05D005231 4.2e-59 231.5 138 77.5
TWI53G1401 Tripterygium wilfordii HOM05D004462 ORTHO05D005231 5.4e-59 231.1 146 75.3
CANSAT35G0603 Cannabis sativa HOM05D004462 ORTHO05D005231 9.3e-59 230.3 143 75.5
Gohir.A08G037800 Gossypium hirsutum HOM05D004462 ORTHO05D005231 9.3e-59 230.3 140 78.6
Duzib128G1697 Durio zibethinus HOM05D004462 ORTHO05D005231 1.6e-58 229.6 140 75.7
AUR62004745 Chenopodium quinoa HOM05D004462 ORTHO05D005231 2.1e-58 229.2 140 76.4
Gohir.D08G048100 Gossypium hirsutum HOM05D004462 ORTHO05D005231 2.7e-58 228.8 140 77.9
Gorai.004G047600 Gossypium raimondii HOM05D004462 ORTHO05D005231 2.7e-58 228.8 140 77.9
Oeu002679.1 Olea europaea HOM05D004462 ORTHO05D005231 6.0e-58 227.6 142 71.8
Actinidia32995 Actinidia chinensis HOM05D004462 ORTHO05D005231 1.0e-57 226.9 139 74.8
CiPaw.04G050400 Carya illinoinensis HOM05D004462 ORTHO05D005231 1.3e-57 226.5 133 78.9
RcHm_v2.0_Chr3g0491741 Rosa chinensis HOM05D004462 ORTHO05D005231 2.3e-57 225.7 142 72.5
FvH4_1g30090 Fragaria vesca HOM05D004462 ORTHO05D005231 3.0e-57 225.3 142 71.8
FAN19G2026 Fragaria x ananassa HOM05D004462 ORTHO05D005231 3.0e-57 225.3 142 71.8
MD09G1269000 Malus domestica HOM05D004462 ORTHO05D005231 8.7e-57 223.8 139 74.1
Manes.02G082400 Manihot esculenta HOM05D004462 ORTHO05D005231 1.5e-56 223.0 138 74.6
Hma1.2p1_0085F.1_g043860 Hydrangea macrophylla HOM05D004462 ORTHO05D005231 1.9e-56 222.6 141 73.8
RcHm_v2.0_Chr3g0491671 Rosa chinensis HOM05D004462 ORTHO05D005231 1.9e-56 222.6 142 71.8
Atru.chr1.1966 Acer truncatum HOM05D004462 ORTHO05D005231 2.5e-56 222.2 139 72.7
Nitab4.5_0000483g0160 Nicotiana tabacum HOM05D004462 ORTHO05D005231 2.5e-56 222.2 146 69.9
Prupe.3G165500 Prunus persica HOM05D004462 ORTHO05D005231 3.3e-56 221.9 139 71.9
RcHm_v2.0_Chr3g0491701 Rosa chinensis HOM05D004462 ORTHO05D005231 3.3e-56 221.9 142 71.8
FAN23G0373 Fragaria x ananassa HOM05D004462 ORTHO05D005231 4.3e-56 221.5 142 70.4
ClCG03G008870 Citrullus lanatus HOM05D004462 ORTHO05D005231 9.6e-56 220.3 144 73.6
Gohir.A07G176700 Gossypium hirsutum HOM05D004462 ORTHO05D005231 2.8e-55 218.8 141 71.6
Gohir.D07G184000 Gossypium hirsutum HOM05D004462 ORTHO05D005231 3.7e-55 218.4 141 71.6
Gorai.001G204400 Gossypium raimondii HOM05D004462 ORTHO05D005231 3.7e-55 218.4 141 71.6
Peaxi162Scf00344g01910 Petunia axillaris HOM05D004462 ORTHO05D005231 4.8e-55 218.0 146 68.5
CsaV3_5G023890 Cucumis sativus L. HOM05D004462 ORTHO05D005231 6.2e-55 217.6 144 72.2
CiPaw.03G079700 Carya illinoinensis HOM05D004462 ORTHO05D005231 1.4e-54 216.5 138 76.8
MD17G1267400 Malus domestica HOM05D004462 ORTHO05D005231 1.4e-54 216.5 139 72.7
LjContig00141g0019021 Lotus japonicus HOM05D004462 ORTHO05D005231 1.8e-54 216.1 143 72.0
Sed0028045 Sechium edule HOM05D004462 ORTHO05D005231 2.4e-54 215.7 146 69.2
PGSC0003DMG400019728 Solanum tuberosum HOM05D004462 ORTHO05D005231 2.4e-54 215.7 146 67.1
MSTRG.15620 Avicennia marina HOM05D004462 ORTHO05D005231 4.0e-54 214.9 143 69.2
Dinv28268 Davidia involucrata HOM05D004462 ORTHO05D005231 4.0e-54 214.9 146 69.9
Hund06859 Selenicereus undatus HOM05D004462 ORTHO05D005231 6.9e-54 214.2 120 80.8
PSO782G5040 Papaver somniferum HOM05D004462 ORTHO05D005231 2.6e-53 212.2 146 69.9
Potri.017G140900 Populus trichocarpa HOM05D004462 ORTHO05D005231 3.4e-53 211.8 144 68.8
Sed0009749 Sechium edule HOM05D004462 ORTHO05D005231 3.4e-53 211.8 140 71.4
CAN.G809.94 Capsicum annuum HOM05D004462 ORTHO05D005231 5.8e-53 211.1 143 66.4
PSO063G2986 Papaver somniferum HOM05D004462 ORTHO05D005231 7.6e-53 210.7 146 69.2
Sopen02g026070 Solanum pennellii HOM05D004462 ORTHO05D005231 7.6e-53 210.7 146 65.8
Cpa.g.c42729 Carica papaya HOM05D004462 ORTHO05D005231 2.9e-52 208.8 121 76.9
GSVIVG01001479001 Vitis vinifera HOM05D004462 ORTHO05D005231 2.9e-52 208.8 146 69.2
Psat2g044120 Pisum sativum HOM05D004462 ORTHO05D005231 6.4e-52 207.6 139 70.5
Solyc02g081430.3 Solanum lycopersicum HOM05D004462 ORTHO05D005231 8.4e-52 207.2 146 64.4
Actinidia28772 Actinidia chinensis HOM05D004462 ORTHO05D005231 1.1e-51 206.8 146 65.8
Nn4g24876 Nelumbo nucifera HOM05D004462 ORTHO05D005231 1.9e-51 206.1 143 68.5
Sabra17G0118400 Salix brachista HOM05D004462 ORTHO05D005231 4.2e-51 204.9 142 67.6
FAN28G0360 Fragaria x ananassa HOM05D004462 ORTHO05D005231 5.5e-51 204.5 130 70.0
Aqoxy3G04063 Aquilegia oxysepala HOM05D004462 ORTHO05D005231 2.1e-50 202.6 137 70.8
Lalb_Chr10g0104001 Lupinus albus HOM05D004462 ORTHO05D005231 2.7e-50 202.2 140 65.7
vmacro18490 Vaccinium macrocarpon HOM05D004462 ORTHO05D005231 2.7e-50 202.2 146 67.1
ATR0753G103 Amborella trichopoda HOM05D004462 ORTHO05D005231 3.5e-50 201.8 139 66.9
HPP92_011089 Vanilla planifolia HOM05D004462 ORTHO05D005231 6.0e-50 201.1 143 63.6
Nn6g35012 Nelumbo nucifera HOM05D004462 ORTHO05D005231 7.9e-50 200.7 143 69.2
arahy.Tifrunner.gnm1.ann1.TN4V22 Arachis hypogaea HOM05D004462 ORTHO05D005231 1.0e-49 200.3 139 66.9
Nn4g24875 Nelumbo nucifera HOM05D004462 ORTHO05D005231 1.0e-49 200.3 144 64.6
CDE05G2284 Ceratophyllum demersum HOM05D004462 ORTHO05D005231 3.0e-49 198.7 138 68.8
Sabra04G0051800 Salix brachista HOM05D004462 ORTHO05D005231 3.9e-49 198.4 121 73.6
SalBow5G4757 Salvia bowleyana HOM05D004462 ORTHO05D005231 3.9e-49 198.4 146 63.0
Cc00_g30600 Coffea canephora HOM05D004462 ORTHO05D005231 5.1e-49 198.0 140 67.9
Cc02_g03200 Coffea canephora HOM05D004462 ORTHO05D005231 5.1e-49 198.0 140 67.9
HPP92_011106 Vanilla planifolia HOM05D004462 ORTHO05D005231 5.1e-49 198.0 143 62.9
Ca_17052_v3 Cicer arietinum L. HOM05D004462 ORTHO05D005231 6.7e-49 197.6 139 64.7
Os03g0709000 Oryza sativa ssp. japonica HOM05D004462 ORTHO05D005231 8.7e-49 197.2 143 63.6
DCAR_003393 Daucus carota HOM05D004462 ORTHO05D005231 1.1e-48 196.8 146 62.3
CSS0041519 Camellia sinensis var. sinensis HOM05D004462 ORTHO05D005231 1.9e-48 196.1 146 65.1
Migut.K01204 Erythranthe guttata HOM05D004462 ORTHO05D005231 2.5e-48 195.7 141 64.5
TPR.G5341 Trifolium pratense HOM05D004462 ORTHO05D005231 3.3e-48 195.3 138 66.7
MBI12_g42585_MAGBIO Magnolia biondii HOM05D004462 ORTHO05D005231 4.3e-48 194.9 138 65.9
Medtr5g076470 Medicago truncatula HOM05D004462 ORTHO05D005231 1.3e-47 193.4 139 66.2
MELO3C022821.2 Cucumis melo HOM05D004462 ORTHO05D005231 2.1e-47 192.6 121 76.0
HPP92_016581 Vanilla planifolia HOM05D004462 ORTHO05D005231 8.2e-47 190.7 134 64.2
Lalb_Chr04g0251561 Lupinus albus HOM05D004462 ORTHO05D005231 1.1e-46 190.3 143 64.3
DCAR_003392 Daucus carota HOM05D004462 ORTHO05D005231 9.0e-46 187.2 142 62.0
ECA238G1611 Erigeron canadensis HOM05D004462 ORTHO05D005231 9.0e-46 187.2 144 59.7
HanXRQChr14g0443511 Helianthus annuus HOM05D004462 ORTHO05D005231 9.0e-46 187.2 144 59.0
DCAR_014136 Daucus carota HOM05D004462 ORTHO05D005231 1.2e-45 186.8 142 64.1
Lsat_1_v5_gn_2_72161 Lactuca sativa HOM05D004462 ORTHO05D005231 1.2e-45 186.8 138 59.4
arahy.Tifrunner.gnm1.ann1.3DVS1U Arachis hypogaea HOM05D004462 ORTHO05D005231 1.5e-45 186.4 116 74.1
arahy.Tifrunner.gnm1.ann1.D1IGUM Arachis hypogaea HOM05D004462 ORTHO05D005231 1.5e-45 186.4 116 74.1
HanXRQChr12g0365631 Helianthus annuus HOM05D004462 ORTHO05D005231 1.5e-45 186.4 144 60.4
Lsat_1_v5_gn_2_72121 Lactuca sativa HOM05D004462 ORTHO05D005231 2.6e-45 185.7 134 61.2
DCAR_003394 Daucus carota HOM05D004462 ORTHO05D005231 2.2e-44 182.6 142 59.2
SMO115G0120 Selaginella moellendorffii HOM05D004462 ORTHO05D005231 4.9e-44 181.4 137 62.8
CDE06G2132 Ceratophyllum demersum HOM05D004462 ORTHO05D005231 1.1e-43 180.3 138 61.6
MD17G1267600 Malus domestica HOM05D004462 ORTHO05D005231 3.2e-43 178.7 111 71.2
PSO210G6210 Papaver somniferum HOM05D004462 ORTHO05D005231 4.2e-43 178.3 117 66.7
vmacro20446 Vaccinium macrocarpon HOM05D004462 ORTHO05D005231 7.1e-43 177.6 143 60.1
Zm00001eb054680 Zea mays HOM05D004462 ORTHO05D005231 7.9e-42 174.1 121 66.9
Rhsim08G0023100 Rhododendron simsii HOM05D004462 ORTHO05D005231 1.3e-41 173.3 117 66.7
vmacro18489 Vaccinium macrocarpon HOM05D004462 ORTHO05D005231 5.1e-41 171.4 111 69.4
arahy.Tifrunner.gnm1.ann1.U75ZTX Arachis hypogaea HOM05D004462 ORTHO05D005231 1.9e-40 169.5 113 67.3
Aqoxy3G04064 Aquilegia oxysepala HOM05D004462 ORTHO05D005231 2.2e-39 166.0 142 57.7
FAN26G3346 Fragaria x ananassa HOM05D004462 ORTHO05D005231 1.1e-38 163.7 98 72.4
arahy.Tifrunner.gnm1.ann1.UF2MTZ Arachis hypogaea HOM05D004462 ORTHO05D005231 1.0e-36 157.1 139 56.1
Mapoly0075s0081 Marchantia polymorpha HOM05D004462 ORTHO05D005231 5.0e-36 154.8 134 53.7
Pp3c13_5830 Physcomitrium patens HOM05D004462 ORTHO05D005231 2.2e-31 139.4 131 50.4
Pp3c13_5831 Physcomitrium patens HOM05D004462 ORTHO05D005231 2.2e-31 139.4 131 50.4
Pp3c12_2960 Physcomitrium patens HOM05D004462 ORTHO05D005231 8.2e-31 137.5 135 48.9
unitig_748.g8625 Utricularia gibba HOM05D001875 ORTHO05D002019 7.2e-27 124.4 85 67.1
DCAR_007795 Daucus carota HOM05D004462 ORTHO05D005231 1.2e-26 123.6 99 59.6
DCAR_010504 Daucus carota HOM05D004462 ORTHO05D005231 1.6e-26 123.2 99 58.6
CBR_g21744 Chara braunii HOM05D004462 ORTHO05D005231 4.7e-26 121.7 144 45.1
Pp3c13_5870 Physcomitrium patens HOM05D004462 ORTHO05D005231 1.8e-25 119.8 127 46.5
DCAR_028827 Daucus carota HOM05D000012 ORTHO05D000567 1.1e-24 117.1 88 60.2
C04p44040 Brassica napus HOM05D004462 ORTHO05D005231 5.7e-24 114.8 55 100.0
C04p44070 Brassica napus HOM05D004462 ORTHO05D005231 5.7e-24 114.8 55 100.0
C04p44110 Brassica napus HOM05D004462 ORTHO05D005231 5.7e-24 114.8 55 100.0
CBR_g266 Chara braunii HOM05D004462 ORTHO05D005231 5.7e-24 114.8 137 41.6
Cre12.g559800 Chlamydomonas reinhardtii HOM05D004462 ORTHO05D005231 7.4e-24 114.4 134 47.0
BcaC02g09555 Brassica carinata HOM05D000188 ORTHO05D005231 1.7e-23 113.2 55 98.2
AagrBONN_evm.TU.Sc2ySwM_117.1823 Anthoceros agrestis HOM05D004462 ORTHO05D005231 5.3e-22 108.2 135 39.3
Mapoly0056s0049 Marchantia polymorpha HOM05D004462 ORTHO05D005231 3.8e-20 102.1 125 42.4
HPP92_009441 Vanilla planifolia HOM05D004462 ORTHO05D005231 8.5e-20 100.9 134 35.8
CBR_g38628 Chara braunii HOM05D004462 ORTHO05D005231 1.1e-19 100.5 128 38.3
Pp3c6_29390 Physcomitrium patens HOM05D004462 ORTHO05D005231 7.2e-19 97.8 140 37.1
SMO337G0081 Selaginella moellendorffii HOM05D004462 ORTHO05D005231 1.8e-17 93.2 139 35.3
Lsat_1_v5_gn_5_96540 Lactuca sativa HOM05D004462 ORTHO05D005231 2.0e-16 89.7 99 50.5
DCAR_011767 Daucus carota HOM05D000532 ORTHO05D002414 2.2e-15 86.3 65 60.0
DCAR_006132 Daucus carota HOM05D004462 ORTHO05D005231 2.8e-15 85.9 59 64.4
GSVIVG01020320001 Vitis vinifera HOM05D004462 ORTHO05D005231 3.7e-15 85.5 54 68.5
MCO14G359 Micromonas commoda HOM05D004462 ORTHO05D005231 6.3e-15 84.7 112 40.2
MCO08G122 Micromonas commoda HOM05D004462 ORTHO05D005231 1.6e-13 80.1 143 35.0
AagrBONN_evm.TU.Sc2ySwM_228.473 Anthoceros agrestis HOM05D004462 ORTHO05D005231 1.0e-12 77.4 82 43.9
PRCOL_00004990 Prasinoderma coloniale HOM05D004462 ORTHO05D005231 4.0e-09 65.5 99 36.4
TAR371G1025 Trochodendron aralioides HOM05D004462 ORTHO05D005231 6.7e-09 64.7 49 57.1
HanXRQChr11g0343111 Helianthus annuus HOM05D004462 ORTHO05D005231 1.4e-06 57.0 41 58.5
Sabra12G0026800 Salix brachista HOM05D001043 ORTHO05D349056 1.8e-06 56.6 32 78.1


User provided reference genes

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