Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p10080 Brassica napus HOM05D009566 ORTHO05D007629 1.7e-163 579.3 302 100.0
BraA04t16670Z Brassica rapa HOM05D009566 ORTHO05D007629 8.7e-152 540.4 307 93.5
BolC4t25935H Brassica oleracea HOM05D009566 ORTHO05D007629 9.6e-151 537.0 302 93.4
BcaC02g09508 Brassica carinata HOM05D009566 ORTHO05D007629 2.4e-149 532.3 302 93.4
C04p43550 Brassica napus HOM05D009566 ORTHO05D007629 4.5e-148 528.1 302 92.4
BcaB06g27006 Brassica carinata HOM05D009566 ORTHO05D007629 3.5e-137 491.9 303 87.1
Sp7g06100 Schrenkiella parvula HOM05D009566 ORTHO05D007629 3.0e-104 382.5 309 71.5
Thhalv10005424m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 5.9e-92 341.7 309 65.7
CARHR216660 Cardamine hirsuta HOM05D009566 ORTHO05D007629 9.2e-77 291.2 314 59.2
BcaB02g08045 Brassica carinata HOM05D009566 ORTHO05D007629 3.9e-75 285.8 296 60.8
AT5G36100 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 2.8e-73 279.6 315 58.4
Carub.0007s3177 Capsella rubella HOM05D009566 ORTHO05D007629 1.9e-66 256.9 312 54.8
Aa31LG9G17880 Aethionema arabicum HOM05D009566 ORTHO05D007629 5.8e-55 218.8 356 45.2
A02p13020 Brassica napus HOM05D009566 ORTHO05D007629 2.3e-43 180.3 309 42.4
C02p21140 Brassica napus HOM05D009566 ORTHO05D007629 3.3e-42 176.4 306 41.2
BolC2t08254H Brassica oleracea HOM05D009566 ORTHO05D007629 4.0e-40 169.5 347 37.8
BraA02t06358Z Brassica rapa HOM05D009566 ORTHO05D007629 2.6e-39 166.8 361 36.8
BcaC03g14675 Brassica carinata HOM05D009566 ORTHO05D007629 5.8e-39 165.6 347 37.8
AL7G45070 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 2.9e-38 163.3 171 56.7
THA.LOC104823805 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 4.2e-37 159.5 355 36.6
AT1G65090 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 9.3e-37 158.3 307 40.7
AL2G19730 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 3.9e-35 152.9 332 38.9
BcaB05g24082 Brassica carinata HOM05D009566 ORTHO05D007629 2.1e-33 147.1 316 38.9
Aa31LG2G2280 Aethionema arabicum HOM05D009566 ORTHO05D007629 3.0e-27 126.7 338 35.2
Thhalv10022484m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 1.9e-21 107.5 318 34.9
Manes.08G105000 Manihot esculenta HOM05D007504 ORTHO05D007629 1.9e-21 107.5 377 28.4
THA.LOC104821804 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 4.2e-21 106.3 251 35.1
Sp5g19730 Schrenkiella parvula HOM05D009566 ORTHO05D007629 1.8e-16 90.9 229 34.9
CARHR056580 Cardamine hirsuta HOM05D009566 ORTHO05D007629 1.5e-15 87.8 227 35.7
Lalb_Chr21g0311381 Lupinus albus HOM05D007504 ORTHO05D007629 1.7e-14 84.3 381 27.8
SalBow6G5451 Salvia bowleyana HOM05D007504 ORTHO05D007629 1.9e-13 80.9 302 28.5
Carub.0002s1043 Capsella rubella HOM05D009566 ORTHO05D007629 9.3e-13 78.6 238 32.8
Ca_09972_v3 Cicer arietinum L. HOM05D007504 ORTHO05D007629 1.2e-12 78.2 97 46.4
QL01p050471 Quercus lobata HOM05D007504 ORTHO05D007629 2.7e-12 77.0 74 50.0
Cpa.g.sc123.14 Carica papaya HOM05D007504 ORTHO05D007629 3.5e-12 76.6 75 52.0
Sabra19G0056400 Salix brachista HOM05D007504 ORTHO05D007629 6.1e-12 75.9 366 26.5
CDE05G0344 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 1.3e-11 74.7 302 25.5
Cfa006286 Carpinus fangiana HOM05D007504 ORTHO05D007629 2.3e-11 73.9 87 48.3
Haze_04521 Corylus avellana HOM05D007504 ORTHO05D007629 2.3e-11 73.9 75 50.7
MELO3C021807.2 Cucumis melo HOM05D007504 ORTHO05D007629 3.0e-11 73.6 354 25.1
MD12G1258000 Malus domestica HOM05D007504 ORTHO05D007629 3.0e-11 73.6 97 47.4
Eucgr.H01377 Eucalyptus grandis HOM05D007504 ORTHO05D007629 3.9e-11 73.2 458 23.4
FAN14G3522 Fragaria x ananassa HOM05D007504 ORTHO05D007629 5.1e-11 72.8 105 42.9
TPR.G14656 Trifolium pratense HOM05D007504 ORTHO05D007629 5.1e-11 72.8 97 45.4
CiPaw.07G074500 Carya illinoinensis HOM05D007504 ORTHO05D007629 6.7e-11 72.4 458 25.3
CDE05G2205 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 6.7e-11 72.4 312 26.9
FvH4_6g00830 Fragaria vesca HOM05D007504 ORTHO05D007629 8.7e-11 72.0 105 42.9
FAN09G1848 Fragaria x ananassa HOM05D007504 ORTHO05D007629 8.7e-11 72.0 79 49.4
Lj7A601T114 Lonicera japonica HOM05D007504 ORTHO05D007629 2.5e-10 70.5 127 39.4
GSVIVG01019149001 Vitis vinifera HOM05D007504 ORTHO05D007629 2.5e-10 70.5 157 36.9
RcHm_v2.0_Chr3g0448301 Rosa chinensis HOM05D007504 ORTHO05D007629 3.3e-10 70.1 97 45.4
CSS0029071 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 4.3e-10 69.7 78 42.3
CsaV3_1G037800 Cucumis sativus L. HOM05D007504 ORTHO05D007629 4.3e-10 69.7 358 24.3
Peaxi162Scf00994g00026 Petunia axillaris HOM05D007504 ORTHO05D007629 4.3e-10 69.7 76 46.1
Thecc.05G204700 Theobroma cacao HOM05D007504 ORTHO05D007629 4.3e-10 69.7 124 38.7
Psat6g051960 Pisum sativum HOM05D007504 ORTHO05D007629 5.7e-10 69.3 96 41.7
Potri.019G052300 Populus trichocarpa HOM05D007504 ORTHO05D007629 5.7e-10 69.3 87 40.2
Aqoxy2G03947 Aquilegia oxysepala HOM05D007504 ORTHO05D007629 9.7e-10 68.6 84 38.1
Oeu008540.1 Olea europaea HOM05D007504 ORTHO05D007629 9.7e-10 68.6 234 29.5
CSS0023929 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 1.3e-09 68.2 176 30.1
Atru.chr12.1547 Acer truncatum HOM05D007504 ORTHO05D007629 1.6e-09 67.8 121 38.8
Duzib177G0136 Durio zibethinus HOM05D007504 ORTHO05D007629 1.6e-09 67.8 98 43.9
TWI59G0549 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 1.6e-09 67.8 452 23.9
Medtr1g078420 Medicago truncatula HOM05D007504 ORTHO05D007629 2.2e-09 67.4 124 37.1
VMungo0720G1881 Vigna mungo HOM05D007504 ORTHO05D007629 2.2e-09 67.4 281 28.5
Dinv02913 Davidia involucrata HOM05D007504 ORTHO05D007629 3.7e-09 66.6 124 34.7
TWI14G0943 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 3.7e-09 66.6 99 40.4
COL.COLO4_06844 Corchorus olitorius HOM05D007504 ORTHO05D007629 4.8e-09 66.2 98 39.8
PSO017G3378 Papaver somniferum HOM05D007504 ORTHO05D007629 4.8e-09 66.2 76 46.1
Ciclev10011923m.g Citrus clementina HOM05D007504 ORTHO05D007629 6.3e-09 65.9 171 31.0
MD04G1241000 Malus domestica HOM05D007504 ORTHO05D007629 8.2e-09 65.5 101 42.6
Sed0012429 Sechium edule HOM05D007504 ORTHO05D007629 8.2e-09 65.5 354 25.4
DCAR_029902 Daucus carota HOM05D007504 ORTHO05D007629 1.1e-08 65.1 199 30.7
Lj5g0006161 Lotus japonicus HOM05D007504 ORTHO05D007629 1.4e-08 64.7 66 51.5
Hund21875 Selenicereus undatus HOM05D007504 ORTHO05D007629 1.8e-08 64.3 458 22.5
Sc09g0001640 Simmondsia chinensis HOM05D007504 ORTHO05D007629 1.8e-08 64.3 95 41.1
Migut.F01885 Erythranthe guttata HOM05D007504 ORTHO05D007629 2.4e-08 63.9 82 40.2
Gohir.A13G089900 Gossypium hirsutum HOM05D007504 ORTHO05D007629 4.1e-08 63.2 87 44.8
TAR636G3585 Trochodendron aralioides HOM05D007504 ORTHO05D007629 4.1e-08 63.2 93 40.9
arahy.Tifrunner.gnm1.ann1.V3BTAU Arachis hypogaea HOM05D007504 ORTHO05D007629 9.0e-08 62.0 177 28.2
AUR62006721 Chenopodium quinoa HOM05D007504 ORTHO05D007629 9.0e-08 62.0 76 44.7
Rhsim09G0131100 Rhododendron simsii HOM05D007504 ORTHO05D007629 9.0e-08 62.0 128 35.9
SGA_v2.0_scaffold10G05147 Striga asiatica HOM05D007504 ORTHO05D007629 9.0e-08 62.0 163 33.7
arahy.Tifrunner.gnm1.ann1.DN7JE5 Arachis hypogaea HOM05D007504 ORTHO05D007629 1.5e-07 61.2 182 29.1
MBI07_g00623_MAGBIO Magnolia biondii HOM05D007504 ORTHO05D007629 1.5e-07 61.2 150 34.7
EL10Ac4g09412 Beta vulgaris HOM05D007504 ORTHO05D007629 2.6e-07 60.5 186 31.7
Glyma.20G219900 Glycine max HOM05D007504 ORTHO05D007629 2.6e-07 60.5 118 38.1
Gorai.002G147900 Gossypium raimondii HOM05D007504 ORTHO05D007629 2.6e-07 60.5 179 33.0
ClCG01G008930 Citrullus lanatus HOM05D007504 ORTHO05D007629 4.5e-07 59.7 365 23.3
Gohir.D13G093400 Gossypium hirsutum HOM05D007504 ORTHO05D007629 5.9e-07 59.3 179 32.4
CAN.G29.22 Capsicum annuum HOM05D007504 ORTHO05D007629 7.7e-07 58.9 76 43.4
Ah.06g195770 Amaranthus hybridus HOM05D007504 ORTHO05D007629 1.0e-06 58.5 126 34.9
Lsat_1_v5_gn_8_3001 Lactuca sativa HOM05D007504 ORTHO05D007629 1.0e-06 58.5 125 34.4
ECA233G2160 Erigeron canadensis HOM05D007504 ORTHO05D007629 1.3e-06 58.2 197 28.9
Actinidia38910 Actinidia chinensis HOM05D007504 ORTHO05D007629 2.2e-06 57.4 175 30.3
Phvul.010G077868 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 2.2e-06 57.4 268 25.4
FAN05G3219 Fragaria x ananassa HOM05D007504 ORTHO05D007629 2.9e-06 57.0 213 28.2
CSS0043883 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 3.8e-06 56.6 66 45.5
Oeu014606.1 Olea europaea HOM05D007504 ORTHO05D007629 3.8e-06 56.6 69 46.4
Phvul.010G077946 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 3.8e-06 56.6 75 37.3
Solyc04g051280.4 Solanum lycopersicum HOM05D007504 ORTHO05D007629 3.8e-06 56.6 173 28.3
Nitab4.5_0000456g0090 Nicotiana tabacum HOM05D007504 ORTHO05D007629 5.0e-06 56.2 171 30.4
PGR031G1611 Punica granatum HOM05D007504 ORTHO05D007629 5.0e-06 56.2 70 42.9
Cc09_g03320 Coffea canephora HOM05D007504 ORTHO05D007629 6.5e-06 55.8 81 39.5


User provided reference genes

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