Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 0.0e+00 1504.2 778 100.0
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 0.0e+00 1464.9 779 97.7
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 0.0e+00 1436.0 780 95.6
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 0.0e+00 1303.5 782 87.3
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 0.0e+00 1260.4 780 85.4
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 0.0e+00 1260.0 781 84.5
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 0.0e+00 1221.8 777 82.2
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 0.0e+00 1191.0 779 83.6
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 0.0e+00 1174.1 783 78.8
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 0.0e+00 1165.2 784 78.8
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 0.0e+00 1139.0 783 77.7
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 4.6e-306 1054.3 771 73.5
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 1.9e-304 1048.9 549 99.1
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 2.5e-304 1048.5 562 97.2
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 7.9e-298 1026.9 727 77.2
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 3.2e-291 1005.0 775 71.0
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 4.1e-270 934.9 800 63.2
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.8e-241 839.7 810 58.6
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 8.6e-228 794.3 850 53.2
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 4.0e-225 785.4 850 52.7
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 4.0e-225 785.4 845 53.8
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.6e-224 782.7 849 52.9
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 2.6e-224 782.7 846 52.5
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 3.2e-222 775.8 855 52.4
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 4.1e-222 775.4 850 52.6
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 5.0e-220 768.5 827 52.4
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.6e-220 768.1 855 52.0
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 3.6e-218 762.3 850 51.5
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 3.6e-218 762.3 857 51.3
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.8e-217 760.0 855 51.9
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 3.1e-217 759.2 837 52.3
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 4.9e-215 751.9 840 51.0
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 4.9e-215 751.9 822 53.0
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 1.4e-214 750.4 828 51.6
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.1e-214 748.0 856 50.7
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 1.6e-213 746.9 846 49.9
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 3.0e-212 742.7 848 49.6
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 4.3e-211 738.8 835 50.8
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 5.6e-211 738.4 824 51.9
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 1.4e-209 733.8 829 51.1
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 1.4e-209 733.8 850 50.7
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 3.1e-209 732.6 852 49.8
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 4.0e-209 732.3 847 51.0
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 4.0e-209 732.3 848 49.5
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 6.8e-209 731.5 831 51.4
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 8.9e-209 731.1 847 49.5
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.2e-208 730.7 829 51.3
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 4.4e-208 728.8 843 49.9
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.7e-207 726.9 842 49.4
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.9e-207 726.1 828 49.4
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 3.8e-207 725.7 846 50.2
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 6.4e-207 724.9 811 50.9
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.1e-206 724.2 881 48.2
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 1.9e-206 723.4 850 50.5
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 1.9e-206 723.4 840 48.9
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 3.2e-206 722.6 831 50.7
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 5.4e-206 721.8 828 51.1
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 9.2e-206 721.1 829 50.8
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 9.2e-206 721.1 832 49.6
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 6.6e-204 714.9 842 49.8
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 5.6e-203 711.8 838 50.5
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 1.6e-202 710.3 824 50.2
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.1e-202 709.9 824 50.1
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.8e-202 709.5 828 49.9
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 6.2e-202 708.4 715 55.1
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 6.2e-202 708.4 823 50.1
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 6.9e-201 704.9 852 48.6
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 2.6e-200 703.0 822 50.2
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 1.7e-199 700.3 832 48.4
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 1.7e-199 700.3 815 47.9
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 4.9e-199 698.7 847 49.4
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 1.2e-197 694.1 974 44.6
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.5e-197 692.6 851 49.1
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.5e-195 686.4 828 48.9
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 1.4e-190 670.6 950 44.5
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 4.2e-190 669.1 836 48.3
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 7.1e-190 668.3 878 46.7
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 3.5e-189 666.0 793 48.7
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 3.5e-189 666.0 815 48.2
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 1.8e-188 663.7 823 47.9
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 3.9e-188 662.5 817 48.1
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 9.9e-184 647.9 855 46.5
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 9.3e-182 641.3 852 46.7
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 4.6e-181 639.0 782 50.3
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 6.0e-181 638.6 855 45.8
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 7.9e-181 638.3 819 45.9
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 1.8e-180 637.1 815 46.9
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 3.9e-180 636.0 818 45.8
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 4.3e-179 632.5 815 46.9
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 5.6e-179 632.1 824 45.4
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 3.7e-178 629.4 820 45.2
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 2.4e-177 626.7 836 45.0
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 5.3e-177 625.5 649 55.2
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.0e-175 621.3 827 45.5
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 2.2e-175 620.2 835 44.8
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 8.4e-175 618.2 840 44.6
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 4.2e-174 615.9 823 45.0
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 2.1e-173 613.6 824 45.6
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 3.5e-173 612.8 983 41.1
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.0e-172 611.3 827 45.1
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.9e-172 609.4 888 43.7
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 5.1e-172 609.0 697 50.2
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.5e-171 607.4 838 44.2
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 1.3e-167 594.3 836 43.7
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 2.2e-167 593.6 857 43.9
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 8.5e-167 591.7 845 44.9
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 4.2e-166 589.3 855 43.6
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 2.3e-164 583.6 854 43.8
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.9e-163 580.5 812 44.8
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 2.5e-163 580.1 809 43.3
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 5.7e-163 578.9 848 42.7
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 7.4e-163 578.6 835 43.5
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 9.1e-161 571.6 816 43.4
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.5e-160 570.9 806 43.4
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 1.7e-159 567.4 800 43.1
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.2e-159 567.0 680 48.7
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.2e-158 563.1 857 42.1
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 3.0e-156 556.6 781 42.1
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.1e-155 554.7 668 49.6
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 1.5e-155 554.3 881 42.3
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 2.8e-154 550.1 834 43.6
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 1.1e-153 548.1 788 43.1
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 3.1e-153 546.6 816 42.8
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 3.4e-152 543.1 796 42.6
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 5.0e-151 539.3 639 48.8
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 8.5e-151 538.5 638 48.7
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 3.2e-150 536.6 301 94.7
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 9.4e-150 535.0 874 41.0
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 1.6e-149 534.3 662 50.2
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.1e-149 533.9 827 42.4
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 4.0e-140 503.1 608 47.9
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 5.9e-136 489.2 637 44.9
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 1.1e-134 485.0 254 99.2
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 1.0e-132 478.4 802 38.8
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 7.5e-131 472.2 869 37.7
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 1.1e-129 468.4 644 44.6
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 4.1e-129 466.5 814 37.6
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 7.0e-129 465.7 631 44.4
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 1.1e-126 458.4 808 37.5
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 1.2e-123 448.4 616 44.6
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 3.7e-122 443.4 254 91.3
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 2.3e-119 434.1 868 35.7
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 5.6e-118 429.5 845 37.4
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 1.7e-111 407.9 786 36.0
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 4.3e-110 403.3 810 35.6
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 9.5e-110 402.1 805 35.2
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 2.1e-104 384.4 574 42.5
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 1.6e-101 374.8 660 39.4
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 1.1e-94 352.1 191 94.2
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 1.1e-92 345.5 756 36.2
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 1.7e-87 328.2 446 43.3
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.3e-79 301.2 418 44.5
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 3.1e-60 237.7 665 29.5
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 3.4e-59 234.2 728 30.1
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.8e-50 204.1 447 35.6
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 4.8e-37 160.6 343 36.4
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 5.3e-36 157.1 190 44.7
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 7.7e-35 153.3 294 35.4
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 7.7e-35 153.3 120 58.3
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.3e-31 141.7 333 34.2
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 5.7e-30 137.1 170 43.5
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.6e-27 129.0 233 36.5
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.3e-26 125.9 200 38.5
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 1.0e-23 116.3 150 51.3
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 4.4e-22 110.9 154 45.5
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.7e-16 91.7 109 47.7
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 6.8e-15 87.0 114 43.9
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 3.4e-14 84.7 111 45.0
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.8e-13 81.6 105 49.5
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.7e-13 81.3 79 51.9
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 4.8e-13 80.9 73 53.4
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 6.3e-13 80.5 64 59.4
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.8e-12 79.0 112 43.8
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 4.1e-12 77.8 73 52.1
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.7e-11 75.1 151 35.8
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 8.6e-10 70.1 53 52.8
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.9e-09 68.9 123 33.3
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 3.4e-06 58.2 43 60.5
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 5.7e-06 57.4 128 33.6
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 5.7e-06 57.4 122 38.5


User provided reference genes

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