Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 1.1e-94 350.1 202 100.0
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 8.3e-90 334.0 204 96.6
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 2.1e-85 319.3 199 94.0
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 3.0e-84 315.5 199 93.0
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 5.4e-81 304.7 199 91.0
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 8.6e-79 297.4 199 84.9
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 3.5e-64 248.8 202 72.8
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 3.1e-60 235.7 200 71.5
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 3.5e-40 169.1 206 58.7
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 1.3e-34 150.6 207 52.2
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 3.0e-31 139.4 200 50.5
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 9.6e-30 134.4 202 51.5
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 1.8e-28 130.2 203 45.8
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 1.3e-26 124.0 148 52.7
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 6.4e-26 121.7 194 46.9
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 6.4e-26 121.7 149 56.4
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 3.2e-25 119.4 172 47.1
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 5.4e-25 118.6 195 42.6
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 7.1e-25 118.2 116 57.8
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 7.1e-25 118.2 133 55.6
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 7.1e-25 118.2 172 45.3
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 9.3e-25 117.9 122 57.4
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 1.6e-24 117.1 208 43.8
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 2.1e-24 116.7 130 55.4
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 2.7e-24 116.3 152 52.0
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.7e-24 116.3 119 55.5
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 3.5e-24 115.9 149 52.3
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 3.5e-24 115.9 144 50.7
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 3.5e-24 115.9 112 58.9
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 6.0e-24 115.2 170 46.5
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 6.0e-24 115.2 122 57.4
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 7.9e-24 114.8 93 66.7
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 7.9e-24 114.8 166 44.0
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 7.9e-24 114.8 146 48.6
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 1.0e-23 114.4 149 51.7
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 1.0e-23 114.4 135 52.6
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 1.8e-23 113.6 150 50.7
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.3e-23 113.2 121 53.7
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 2.3e-23 113.2 121 53.7
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 2.3e-23 113.2 148 47.3
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 3.0e-23 112.8 148 50.0
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 3.9e-23 112.5 117 56.4
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 3.9e-23 112.5 162 44.4
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 3.9e-23 112.5 147 50.3
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 3.9e-23 112.5 76 76.3
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 6.7e-23 111.7 142 52.1
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 8.7e-23 111.3 156 48.7
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 1.1e-22 110.9 199 42.7
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 1.5e-22 110.5 148 48.6
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.9e-22 110.2 149 49.0
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 1.9e-22 110.2 117 55.6
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 2.5e-22 109.8 92 67.4
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 2.5e-22 109.8 187 41.7
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 3.3e-22 109.4 163 46.6
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 3.3e-22 109.4 200 39.0
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 3.3e-22 109.4 160 47.5
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 4.3e-22 109.0 149 50.3
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 5.6e-22 108.6 95 64.2
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 5.6e-22 108.6 103 63.1
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 7.4e-22 108.2 99 62.6
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 9.6e-22 107.8 120 55.0
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 9.6e-22 107.8 129 49.6
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 9.6e-22 107.8 144 48.6
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 1.3e-21 107.5 125 52.8
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 1.3e-21 107.5 167 46.1
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 2.1e-21 106.7 153 45.1
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 2.8e-21 106.3 128 52.3
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 2.8e-21 106.3 202 41.1
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 3.7e-21 105.9 83 69.9
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 3.7e-21 105.9 120 55.8
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 3.7e-21 105.9 139 48.2
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 3.7e-21 105.9 148 47.3
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 4.8e-21 105.5 129 54.3
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 4.8e-21 105.5 177 42.9
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 6.2e-21 105.1 157 44.6
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 8.1e-21 104.8 90 65.6
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 8.1e-21 104.8 148 47.3
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 8.1e-21 104.8 105 57.1
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 1.4e-20 104.0 127 53.5
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 1.8e-20 103.6 76 71.1
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 3.1e-20 102.8 80 66.2
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 3.1e-20 102.8 148 50.0
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 4.0e-20 102.4 131 56.5
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 4.0e-20 102.4 225 40.4
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 5.3e-20 102.1 86 65.1
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 5.3e-20 102.1 83 66.3
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 5.3e-20 102.1 76 68.4
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 5.3e-20 102.1 156 43.6
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 6.9e-20 101.7 126 50.8
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 9.0e-20 101.3 177 39.5
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 9.0e-20 101.3 181 40.3
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 1.2e-19 100.9 125 48.8
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 2.0e-19 100.1 204 39.7
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 5.8e-19 98.6 125 49.6
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 7.6e-19 98.2 162 43.2
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 1.0e-18 97.8 180 41.7
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 8.4e-18 94.7 91 56.0
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.1e-17 94.4 77 64.9
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 5.5e-17 92.0 131 51.9
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 5.5e-17 92.0 125 49.6
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 1.2e-16 90.9 128 47.7
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 4.6e-16 89.0 101 54.5
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 6.0e-16 88.6 171 39.2
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 1.8e-15 87.0 132 40.9
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 1.8e-15 87.0 82 62.2
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 3.9e-15 85.9 94 54.3
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 6.7e-15 85.1 127 46.5
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 8.7e-15 84.7 112 44.6
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 1.1e-14 84.3 143 41.3
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 1.5e-14 84.0 88 54.5
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 3.3e-14 82.8 65 66.2
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 5.7e-14 82.0 74 60.8
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 5.7e-14 82.0 64 65.6
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 2.1e-13 80.1 100 50.0
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 2.8e-13 79.7 92 51.1
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 9.0e-12 74.7 131 38.9
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 2.0e-11 73.6 71 60.6
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 5.8e-11 72.0 76 52.6
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 7.6e-11 71.6 66 56.1
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 1.0e-10 71.2 90 50.0
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 7.1e-09 65.1 81 43.2
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.6e-08 63.9 59 59.3
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.6e-08 63.9 59 59.3
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 2.1e-08 63.5 57 61.4
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 2.1e-08 63.5 57 61.4
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 1.8e-07 60.5 45 64.4
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 2.5e-06 56.6 60 48.3
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 9.7e-06 54.7 124 33.1


User provided reference genes

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