Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 9.2e-159 563.9 378 100.0
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 5.2e-154 548.1 378 96.6
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 3.7e-144 515.4 388 90.5
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 1.6e-142 510.0 388 90.2
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 1.6e-142 510.0 388 89.9
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 4.7e-131 471.9 394 84.3
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 6.7e-117 424.9 375 77.9
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 1.1e-100 370.9 375 72.3
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.4e-98 364.0 381 72.4
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.8e-98 363.6 381 72.2
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 4.2e-95 352.4 381 69.0
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 1.6e-94 350.5 380 65.8
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.7e-80 303.9 379 59.9
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 1.7e-67 260.8 401 55.9
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 2.2e-67 260.4 386 52.3
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 5.3e-66 255.8 376 52.9
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 1.2e-65 254.6 332 53.0
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 5.9e-65 252.3 391 51.2
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 1.9e-63 247.3 381 52.0
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 3.2e-63 246.5 384 49.2
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 3.2e-63 246.5 344 54.7
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 5.5e-63 245.7 275 69.5
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 9.4e-63 245.0 383 50.4
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 1.2e-62 244.6 297 50.8
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 8.0e-62 241.9 383 50.7
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 1.0e-61 241.5 364 50.8
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 1.0e-61 241.5 403 50.9
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 1.0e-61 241.5 383 52.2
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 1.8e-61 240.7 385 49.4
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 3.0e-61 240.0 372 49.7
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 8.8e-61 238.4 368 51.1
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.2e-60 238.0 375 49.9
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.2e-60 238.0 351 49.9
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 2.6e-60 236.9 374 50.3
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 2.6e-60 236.9 345 49.9
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 5.7e-60 235.7 347 49.3
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 2.2e-59 233.8 348 53.7
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 2.2e-59 233.8 382 47.9
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 3.7e-59 233.0 284 50.7
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 3.7e-59 233.0 392 49.5
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 4.8e-59 232.6 376 49.5
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 4.8e-59 232.6 415 48.0
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 8.3e-59 231.9 281 51.2
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 1.1e-58 231.5 379 49.3
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 1.8e-58 230.7 368 55.7
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 9.1e-58 228.4 414 47.1
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 1.2e-57 228.0 396 47.7
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 2.0e-57 227.3 385 53.5
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 2.7e-57 226.9 337 48.1
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 7.7e-57 225.3 272 55.9
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 2.9e-56 223.4 353 48.4
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 1.5e-55 221.1 311 46.0
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 1.9e-55 220.7 392 47.7
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 3.2e-55 219.9 394 50.0
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 3.2e-55 219.9 289 46.4
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 3.2e-55 219.9 284 49.6
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 3.2e-55 219.9 387 48.8
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 7.2e-55 218.8 344 48.5
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 7.2e-55 218.8 378 48.7
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 7.2e-55 218.8 232 62.5
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.2e-54 218.0 405 48.9
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 1.2e-54 218.0 497 43.7
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 2.1e-54 217.2 363 53.2
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 2.8e-54 216.9 387 46.0
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 2.8e-54 216.9 375 47.5
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 4.7e-54 216.1 274 49.3
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 1.8e-53 214.2 274 48.9
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 5.2e-53 212.6 279 53.4
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 6.8e-53 212.2 293 58.0
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 2.6e-52 210.3 373 50.9
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 7.5e-52 208.8 383 53.3
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 7.5e-52 208.8 284 47.5
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 7.5e-52 208.8 297 53.5
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 1.7e-51 207.6 372 53.0
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 2.2e-51 207.2 301 48.5
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 3.7e-51 206.5 296 50.7
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 4.9e-51 206.1 204 56.4
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 1.4e-50 204.5 188 59.0
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 3.1e-50 203.4 190 59.5
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 4.1e-50 203.0 394 45.7
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.2e-49 201.4 401 46.1
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 2.0e-49 200.7 290 45.2
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 3.5e-49 199.9 382 51.0
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.3e-48 198.0 278 42.8
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 2.3e-48 197.2 270 54.1
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.1e-47 194.9 202 53.0
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 2.1e-46 190.7 207 50.2
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.8e-46 190.3 387 48.3
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 3.6e-46 189.9 262 47.7
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.8e-45 187.6 184 55.4
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 1.8e-45 187.6 192 52.6
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 1.8e-45 187.6 439 41.0
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 2.0e-44 184.1 320 38.8
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 3.4e-44 183.3 380 43.7
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 7.5e-44 182.2 200 50.0
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 3.7e-43 179.9 247 44.1
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 4.9e-43 179.5 362 45.9
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 5.4e-42 176.0 195 48.7
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.0e-40 171.8 177 53.1
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.7e-40 171.0 197 50.8
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 2.3e-40 170.6 277 51.3
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 7.3e-39 165.6 353 45.9
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 2.6e-36 157.1 180 51.7
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 9.8e-36 155.2 166 54.2
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 2.2e-35 154.1 451 37.0
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 3.2e-34 150.2 190 48.4
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 4.1e-34 149.8 201 43.3
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 2.3e-32 144.1 188 45.7
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 2.1e-30 137.5 225 38.7
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 2.8e-30 137.1 209 38.8
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 2.2e-27 127.5 180 42.8
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 6.6e-16 89.4 122 43.4
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 8.1e-14 82.4 222 36.5
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 8.1e-14 82.4 128 46.9
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 2.1e-09 67.8 215 43.7
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 2.7e-09 67.4 77 50.6


User provided reference genes

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