Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 8.4e-140 500.4 256 100.0
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 3.0e-129 465.3 257 95.3
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 2.2e-124 449.1 260 92.7
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 1.4e-123 446.4 265 90.9
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 4.2e-123 444.9 265 90.2
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 4.5e-101 371.7 264 81.1
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 1.1e-91 340.5 270 69.6
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 6.6e-84 314.7 270 66.3
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 2.1e-82 309.7 271 66.4
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 3.9e-76 288.9 270 64.4
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 1.9e-70 270.0 269 60.6
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 4.6e-69 265.4 277 59.6
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 6.0e-69 265.0 264 61.7
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 3.3e-59 232.6 267 52.8
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 8.1e-34 148.3 252 40.9
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 1.4e-33 147.5 253 41.1
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 5.8e-32 142.1 252 39.7
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 7.6e-32 141.7 254 39.4
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 4.6e-29 132.5 251 39.8
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 5.1e-28 129.0 269 41.3
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 3.3e-27 126.3 251 37.8
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 4.0e-25 119.4 258 39.1
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 2.0e-24 117.1 256 38.7
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 7.6e-24 115.2 264 38.3
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 1.0e-23 114.8 255 36.9
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 1.0e-23 114.8 263 39.5
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 2.2e-23 113.6 268 36.9
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 4.9e-23 112.5 268 33.6
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 7.1e-22 108.6 269 36.1
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 9.3e-22 108.2 268 36.9
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 1.2e-21 107.8 272 37.5
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 1.2e-21 107.8 264 35.2
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 1.6e-21 107.5 261 35.2
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 1.6e-21 107.5 257 36.6
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 2.7e-21 106.7 264 34.1
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 6.0e-21 105.5 269 37.9
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 1.0e-20 104.8 114 50.9
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 1.8e-20 104.0 257 37.0
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 1.8e-20 104.0 261 32.2
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 3.0e-20 103.2 260 34.2
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 3.9e-20 102.8 269 34.6
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 5.1e-20 102.4 260 34.6
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 1.1e-19 101.3 287 32.4
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 1.9e-19 100.5 256 35.9
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 7.4e-19 98.6 281 33.5
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 2.2e-18 97.1 256 36.3
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 2.8e-18 96.7 265 34.0
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 8.2e-18 95.1 255 32.5
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 2.4e-17 93.6 103 50.5
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 4.1e-17 92.8 263 33.8
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 1.2e-16 91.3 91 56.0
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 2.0e-16 90.5 294 33.7
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 2.6e-16 90.1 281 32.7
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 7.7e-16 88.6 259 32.0
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 7.7e-16 88.6 261 33.3
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 1.3e-15 87.8 259 34.4
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 1.7e-15 87.4 267 31.8
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 2.2e-15 87.0 271 31.0
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 5.0e-15 85.9 258 34.1
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 1.4e-14 84.3 257 30.4
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 3.2e-14 83.2 258 31.8
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 4.2e-14 82.8 254 33.1
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 7.2e-14 82.0 265 31.7
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 1.6e-13 80.9 263 34.6
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 2.7e-13 80.1 258 31.0
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 6.1e-13 79.0 255 29.8
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 5.1e-12 75.9 105 41.0
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 5.1e-12 75.9 51 68.6
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 8.8e-12 75.1 45 71.1
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 8.8e-12 75.1 90 46.7
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 1.5e-11 74.3 80 50.0
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 2.0e-11 73.9 86 44.2
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 2.5e-11 73.6 90 44.4
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 3.3e-11 73.2 260 27.7
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 4.3e-11 72.8 255 29.4
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 4.3e-11 72.8 257 28.8
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 5.7e-11 72.4 85 45.9
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 9.7e-11 71.6 256 29.3
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 9.7e-11 71.6 81 49.4
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 2.2e-10 70.5 111 36.0
AUR62015355 Chenopodium quinoa HOM05D007349 ORTHO05D009317 1.1e-09 68.2 76 46.1
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 1.8e-09 67.4 76 46.1
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 2.4e-09 67.0 98 39.8
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 6.9e-09 65.5 85 40.0
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 6.9e-09 65.5 42 69.0
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 9.1e-09 65.1 270 28.5
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 9.1e-09 65.1 302 26.2
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 1.5e-08 64.3 81 48.1
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 4.5e-08 62.8 122 35.2
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 2.9e-07 60.1 42 66.7
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 5.0e-07 59.3 213 28.6
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 6.5e-07 58.9 81 42.0
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.9e-06 57.4 241 30.3


User provided reference genes

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