Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p07610 Brassica napus HOM05D000126 ORTHO05D000085 2.3e-50 201.8 95 100.0
BcaC06g30911 Brassica carinata HOM05D000126 ORTHO05D000085 3.0e-18 95.1 48 89.6
A06p40470 Brassica napus HOM05D000126 ORTHO05D000085 2.6e-17 92.0 48 87.5
BraA06t26965Z Brassica rapa HOM05D000126 ORTHO05D000085 2.6e-17 92.0 48 87.5
C07p37560 Brassica napus HOM05D000126 ORTHO05D000085 5.7e-17 90.9 48 87.5
BolC7t44270H Brassica oleracea HOM05D000126 ORTHO05D000085 5.7e-17 90.9 48 87.5
Carub.0005s0713 Capsella rubella HOM05D000126 ORTHO05D000085 3.1e-15 85.1 48 77.1
Thhalv10005338m.g Eutrema salsugineum HOM05D000126 ORTHO05D000085 1.3e-13 79.7 47 74.5
BcaC04g23872 Brassica carinata HOM05D000126 ORTHO05D000085 2.5e-12 75.5 51 58.8
A09p03690 Brassica napus HOM05D000126 ORTHO05D000085 2.5e-12 75.5 51 58.8
BolC9t53317H Brassica oleracea HOM05D000126 ORTHO05D000085 2.5e-12 75.5 51 58.8
BraA09t36005Z Brassica rapa HOM05D000126 ORTHO05D000085 2.5e-12 75.5 51 58.8
BcaB04g19466 Brassica carinata HOM05D000126 ORTHO05D000085 4.2e-12 74.7 48 62.5
Carub.0005s0705 Capsella rubella HOM05D000126 ORTHO05D000085 5.5e-12 74.3 74 45.9
C09p03900 Brassica napus HOM05D000126 ORTHO05D000085 7.2e-12 73.9 51 56.9
Thhalv10003936m.g Eutrema salsugineum HOM05D000126 ORTHO05D000085 7.2e-12 73.9 49 61.2
Sp2g17270 Schrenkiella parvula HOM05D000126 ORTHO05D000085 7.2e-12 73.9 48 60.4
AT3G28560 Arabidopsis thaliana HOM05D000126 ORTHO05D000085 1.6e-11 72.8 48 72.9
CARHR286780 Cardamine hirsuta HOM05D000126 ORTHO05D000085 1.6e-11 72.8 74 44.6
CARHR286750 Cardamine hirsuta HOM05D000126 ORTHO05D000085 2.8e-11 72.0 48 64.6
BcaC06g30912 Brassica carinata HOM05D000126 ORTHO05D000085 6.1e-11 70.9 48 58.3
AL5G18140 Arabidopsis lyrata HOM05D000126 ORTHO05D000085 8.0e-11 70.5 51 51.0
AT3G28510 Arabidopsis thaliana HOM05D000126 ORTHO05D000085 1.4e-10 69.7 51 51.0
A06p40480 Brassica napus HOM05D000126 ORTHO05D000085 1.8e-10 69.3 48 56.2
C07p37550 Brassica napus HOM05D000126 ORTHO05D000085 1.8e-10 69.3 48 56.2
BolC7t44268H Brassica oleracea HOM05D000126 ORTHO05D000085 1.8e-10 69.3 48 56.2
BraA06t26966Z Brassica rapa HOM05D000126 ORTHO05D000085 1.8e-10 69.3 48 56.2
CARHR286770 Cardamine hirsuta HOM05D000126 ORTHO05D000085 1.8e-10 69.3 48 62.5
Carub.0005s0706 Capsella rubella HOM05D000126 ORTHO05D000085 3.0e-10 68.6 48 56.2
Carub.0005s0712 Capsella rubella HOM05D000126 ORTHO05D000085 4.0e-10 68.2 67 46.3
Carub.0005s0707 Capsella rubella HOM05D000126 ORTHO05D000085 2.6e-09 65.5 50 56.0
BcaC06g33621 Brassica carinata HOM05D000126 ORTHO05D000085 7.5e-09 63.9 48 52.1
Thhalv10005409m.g Eutrema salsugineum HOM05D000126 ORTHO05D000085 7.5e-09 63.9 74 37.8
Aa31LG2G4570 Aethionema arabicum HOM05D000126 ORTHO05D000085 1.7e-08 62.8 48 50.0
Aa31LG2G17540 Aethionema arabicum HOM05D000126 ORTHO05D000085 2.2e-08 62.4 68 42.6
Aa31LG2G14840 Aethionema arabicum HOM05D000126 ORTHO05D000085 3.7e-08 61.6 48 50.0
AT3G28540 Arabidopsis thaliana HOM05D000126 ORTHO05D000085 4.9e-08 61.2 48 56.2
A02p35990 Brassica napus HOM05D000126 ORTHO05D000085 8.3e-08 60.5 74 39.2
BraA02t08598Z Brassica rapa HOM05D000126 ORTHO05D000085 8.3e-08 60.5 74 39.2
THA.LOC104805433 Tarenaya hassleriana HOM05D000126 ORTHO05D000085 8.3e-08 60.5 42 57.1
AL5G18150 Arabidopsis lyrata HOM05D000126 ORTHO05D000085 1.4e-07 59.7 48 56.2
TAR371G1137 Trochodendron aralioides HOM05D000126 ORTHO05D000085 1.8e-07 59.3 72 37.5
BcaB07g30126 Brassica carinata HOM05D000126 ORTHO05D000085 4.1e-07 58.2 68 41.2
CsaV3_3G041800 Cucumis sativus L. HOM05D000126 ORTHO05D000085 4.5e-06 54.7 70 37.1
BraA02t08597Z Brassica rapa HOM05D000277 ORTHO05D000214 5.9e-06 54.3 51 47.1
BcaC03g17521 Brassica carinata HOM05D000126 ORTHO05D000085 7.8e-06 53.9 51 45.1
C02p54830 Brassica napus HOM05D000126 ORTHO05D000085 7.8e-06 53.9 51 45.1


User provided reference genes

Program Settings