Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p06430 Brassica napus HOM05D006485 ORTHO05D006108 2.3e-100 370.2 452 100.0
BraA04t16347Z Brassica rapa HOM05D006485 ORTHO05D006108 5.0e-95 352.4 452 97.6
C04p39920 Brassica napus HOM05D006485 ORTHO05D006108 3.4e-91 339.7 453 96.7
BcaC02g09194 Brassica carinata HOM05D006485 ORTHO05D006108 4.7e-77 292.7 454 92.7
BolC4t25563H Brassica oleracea HOM05D006485 ORTHO05D006108 4.7e-77 292.7 454 92.7
BcaB02g08540 Brassica carinata HOM05D006485 ORTHO05D006108 1.2e-64 251.5 462 84.0
Sp5g09280 Schrenkiella parvula HOM05D006485 ORTHO05D006108 6.2e-53 212.6 450 75.1
Thhalv10010945m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 4.2e-41 173.3 466 73.6
AT3G53040 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 1.8e-39 167.9 490 69.4
Carub.0005s1954 Capsella rubella HOM05D006485 ORTHO05D006108 9.3e-33 145.6 458 69.9
AL5G33870 Arabidopsis lyrata HOM05D006485 ORTHO05D006108 2.4e-28 131.0 516 66.3
CARHR162930 Cardamine hirsuta HOM05D006485 ORTHO05D006108 4.0e-28 130.2 104 73.1
AL4G32820 Arabidopsis lyrata HOM05D006485 ORTHO05D006108 7.1e-25 119.4 467 71.1
Aa31LG5G21840 Aethionema arabicum HOM05D006485 ORTHO05D006108 3.5e-24 117.1 465 68.2
Thhalv10017525m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 4.6e-24 116.7 463 68.5
Carub.0004s1846 Capsella rubella HOM05D006485 ORTHO05D006108 3.7e-21 107.1 468 63.9
CARHR130920 Cardamine hirsuta HOM05D006485 ORTHO05D006108 3.7e-21 107.1 105 63.8
AT2G36640 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 1.1e-20 105.5 467 69.2
Sp4g18920 Schrenkiella parvula HOM05D006485 ORTHO05D006108 1.1e-20 105.5 468 64.7
A05p09230 Brassica napus HOM05D006485 ORTHO05D006108 3.1e-20 104.0 446 62.1
THA.LOC104827498 Tarenaya hassleriana HOM05D006485 ORTHO05D006108 1.0e-18 99.0 453 52.5
A04p28050 Brassica napus HOM05D006485 ORTHO05D006108 8.5e-18 95.9 108 58.3
C04p65460 Brassica napus HOM05D006485 ORTHO05D006108 8.5e-18 95.9 108 58.3
BraA04t18292Z Brassica rapa HOM05D006485 ORTHO05D006108 1.9e-17 94.7 108 57.4
BcaB06g28951 Brassica carinata HOM05D006485 ORTHO05D006108 2.5e-17 94.4 108 59.3
BolC4t28034H Brassica oleracea HOM05D006485 ORTHO05D006108 4.2e-17 93.6 108 57.4
BcaB06g28954 Brassica carinata HOM05D006485 ORTHO05D006108 1.6e-16 91.7 108 55.6
BcaC02g11777 Brassica carinata HOM05D006485 ORTHO05D006108 6.1e-16 89.7 99 57.6
BolC4t22800H Brassica oleracea HOM05D006485 ORTHO05D006108 6.1e-16 89.7 99 57.6
ClCG10G019560 Citrullus lanatus HOM05D006485 ORTHO05D006108 1.0e-10 72.4 111 47.7
Atru.chr8.1691 Acer truncatum HOM05D006485 ORTHO05D006108 2.2e-10 71.2 74 55.4
Thecc.05G077700 Theobroma cacao HOM05D006485 ORTHO05D006108 2.9e-10 70.9 85 51.8
Prupe.7G121500 Prunus persica HOM05D006485 ORTHO05D006108 5.0e-10 70.1 102 49.0
Eucgr.A01582 Eucalyptus grandis HOM05D006485 ORTHO05D006108 2.5e-09 67.8 92 46.7
FvH4_6g17400 Fragaria vesca HOM05D006485 ORTHO05D006108 3.2e-09 67.4 109 44.0
Aqoxy1G01006 Aquilegia oxysepala HOM05D006485 ORTHO05D006108 4.2e-09 67.0 88 45.5
MELO3C009418.2 Cucumis melo HOM05D006485 ORTHO05D006108 4.2e-09 67.0 109 42.2
FAN14G0187 Fragaria x ananassa HOM05D006485 ORTHO05D006108 4.2e-09 67.0 109 44.0
PSO063G6051 Papaver somniferum HOM05D006485 ORTHO05D006108 5.5e-09 66.6 103 41.7
C04p11500 Brassica napus HOM05D006485 ORTHO05D006108 7.2e-09 66.2 65 60.0
FAN09G4412 Fragaria x ananassa HOM05D006485 ORTHO05D006108 7.2e-09 66.2 109 44.0
Ciclev10013512m.g Citrus clementina HOM05D006485 ORTHO05D006108 9.4e-09 65.9 110 44.5
FAN02G3096 Fragaria x ananassa HOM05D006485 ORTHO05D006108 9.4e-09 65.9 109 43.1
FAN09G1969 Fragaria x ananassa HOM05D006485 ORTHO05D006108 9.4e-09 65.9 109 43.1
PSO339G3752 Papaver somniferum HOM05D006485 ORTHO05D006108 9.4e-09 65.9 106 39.6
PGR004G2529 Punica granatum HOM05D006485 ORTHO05D006108 9.4e-09 65.9 101 50.5
QL07p041110 Quercus lobata HOM05D006485 ORTHO05D006108 1.2e-08 65.5 90 51.1
CiPaw.10G003000 Carya illinoinensis HOM05D006485 ORTHO05D006108 2.1e-08 64.7 93 46.2
BcaC02g07584 Brassica carinata HOM05D006485 ORTHO05D006108 3.6e-08 63.9 80 52.5
FAN05G3442 Fragaria x ananassa HOM05D006485 ORTHO05D006108 7.9e-08 62.8 109 42.2
COL.COLO4_22277 Corchorus olitorius HOM05D006485 ORTHO05D006108 1.0e-07 62.4 87 46.0
CsaV3_3G036640 Cucumis sativus L. HOM05D006485 ORTHO05D006108 1.4e-07 62.0 99 42.4
SGA_v2.0_scaffold277G46722 Striga asiatica HOM05D006485 ORTHO05D006108 1.8e-07 61.6 84 47.6
Potri.015G060600 Populus trichocarpa HOM05D006485 ORTHO05D006108 2.3e-07 61.2 92 48.9
FAN05G4746 Fragaria x ananassa HOM05D006485 ORTHO05D006108 3.0e-07 60.8 102 40.2
TWI53G1251 Tripterygium wilfordii HOM05D006485 ORTHO05D006108 3.0e-07 60.8 88 45.5
Gohir.D04G106200 Gossypium hirsutum HOM05D006485 ORTHO05D006108 5.1e-07 60.1 110 43.6
DCAR_020791 Daucus carota HOM05D006485 ORTHO05D006108 6.7e-07 59.7 110 40.9
Nitab4.5_0006314g0010 Nicotiana tabacum HOM05D006485 ORTHO05D006108 6.7e-07 59.7 75 49.3
SalBow5G2944 Salvia bowleyana HOM05D006485 ORTHO05D006108 8.8e-07 59.3 91 42.9
AUR62040165 Chenopodium quinoa HOM05D006485 ORTHO05D006108 1.1e-06 58.9 84 44.0
AUR62037914 Chenopodium quinoa HOM05D006485 ORTHO05D006108 1.5e-06 58.5 85 43.5
DCAR_020790 Daucus carota HOM05D006485 ORTHO05D006108 1.5e-06 58.5 100 43.0
Gorai.009G410100 Gossypium raimondii HOM05D006485 ORTHO05D006108 1.5e-06 58.5 110 42.7
MD09G1267600 Malus domestica HOM05D006485 ORTHO05D006108 1.5e-06 58.5 104 39.4
Nitab4.5_0000680g0110 Nicotiana tabacum HOM05D006485 ORTHO05D006108 1.5e-06 58.5 105 40.0
CAN.G824.55 Capsicum annuum HOM05D006485 ORTHO05D006108 2.6e-06 57.8 90 41.1
Gohir.A04G067600 Gossypium hirsutum HOM05D006485 ORTHO05D006108 3.3e-06 57.4 105 42.9
Gohir.A09G142800 Gossypium hirsutum HOM05D006485 ORTHO05D006108 3.3e-06 57.4 147 36.7
Gorai.006G159500 Gossypium raimondii HOM05D006485 ORTHO05D006108 3.3e-06 57.4 147 36.7
Atru.chr8.1686 Acer truncatum HOM05D006485 ORTHO05D006108 4.4e-06 57.0 93 44.1
EL10Ac7g16753 Beta vulgaris HOM05D006485 ORTHO05D006108 4.4e-06 57.0 85 47.1
Solyc09g008770.3 Solanum lycopersicum HOM05D006485 ORTHO05D006108 4.4e-06 57.0 82 47.6
PGSC0003DMG400002731 Solanum tuberosum HOM05D006485 ORTHO05D006108 4.4e-06 57.0 96 40.6
Gohir.D09G139000 Gossypium hirsutum HOM05D006485 ORTHO05D006108 7.4e-06 56.2 147 35.4
Peaxi162Scf00500g00067 Petunia axillaris HOM05D006485 ORTHO05D006108 9.7e-06 55.8 100 41.0


User provided reference genes

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