Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p04940 Brassica napus HOM05D000147 ORTHO05D027042 2.2e-31 138.3 68 100.0
BcaC02g09317 Brassica carinata HOM05D000147 ORTHO05D027042 1.3e-23 112.5 55 94.5
BolC2t09018H Brassica oleracea HOM05D000147 ORTHO05D027042 6.1e-21 103.6 49 95.9
BcaNung01640 Brassica carinata HOM05D000147 ORTHO05D003093 1.3e-15 85.9 44 95.5
BcaC01g02599 Brassica carinata HOM05D000147 ORTHO05D003093 1.7e-15 85.5 45 88.9
BcaC09g50549 Brassica carinata HOM05D000147 ORTHO05D003093 2.9e-15 84.7 44 93.2
BolC1t02360H Brassica oleracea HOM05D000147 ORTHO05D003093 2.9e-15 84.7 44 93.2
BcaC01g04298 Brassica carinata HOM05D000147 ORTHO05D003093 8.5e-15 83.2 45 86.7
C03p43140 Brassica napus HOM05D000147 ORTHO05D003093 8.5e-15 83.2 45 86.7
BolC3t16583H Brassica oleracea HOM05D000147 ORTHO05D003093 8.5e-15 83.2 45 86.7
BraA03t14815Z Brassica rapa HOM05D000147 ORTHO05D003093 1.9e-14 82.0 44 93.2
A01p19120 Brassica napus HOM05D000147 ORTHO05D003093 2.5e-14 81.6 44 90.9
C01p24040 Brassica napus HOM05D003194 ORTHO05D003093 2.5e-14 81.6 44 90.9
BraA01t01854Z Brassica rapa HOM05D000147 ORTHO05D003093 2.5e-14 81.6 44 90.9
A03p57470 Brassica napus HOM05D000147 ORTHO05D003093 4.2e-14 80.9 44 90.9
C07p55680 Brassica napus HOM05D000147 ORTHO05D003093 4.2e-14 80.9 44 90.9
BolC7t46048H Brassica oleracea HOM05D000147 ORTHO05D003093 4.2e-14 80.9 44 90.9
BcaC03g15363 Brassica carinata HOM05D036350 ORTHO05D093716 5.5e-14 80.5 39 97.4
Sp7g25660 Schrenkiella parvula HOM05D000147 ORTHO05D003093 1.6e-13 79.0 44 88.6
BcaB06g26086 Brassica carinata HOM05D000147 ORTHO05D027042 2.1e-13 78.6 43 90.7
Thhalv10025375m.g Eutrema salsugineum HOM05D000147 ORTHO05D003093 2.6e-11 71.6 51 74.5
Aa31sc1529G10 Aethionema arabicum HOM05D000147 ORTHO05D003093 2.2e-10 68.6 51 74.5
CARHR235410 Cardamine hirsuta HOM05D000147 ORTHO05D003093 3.7e-10 67.8 43 83.7
AT4G27680 Arabidopsis thaliana HOM05D000147 ORTHO05D003093 6.3e-10 67.0 50 74.0
THA.LOC104799952 Tarenaya hassleriana HOM05D000147 ORTHO05D003093 6.3e-10 67.0 51 70.6
AL7G24980 Arabidopsis lyrata HOM05D000147 ORTHO05D003093 4.1e-09 64.3 50 70.0
BraA04t16208Z Brassica rapa HOM05D000147 ORTHO05D003093 4.1e-09 64.3 31 96.8
Carub.0007s1314 Capsella rubella HOM05D000147 ORTHO05D003093 4.1e-09 64.3 50 72.0
C02p29710 Brassica napus HOM05D000147 ORTHO05D003093 1.2e-08 62.8 30 93.3
THA.LOC104825160 Tarenaya hassleriana HOM05D000147 ORTHO05D003093 1.2e-08 62.8 51 60.8
BcaB04g17323 Brassica carinata HOM05D002818 ORTHO05D003244 2.7e-08 61.6 37 81.1
Sp6g15680 Schrenkiella parvula HOM05D000147 ORTHO05D003093 3.5e-08 61.2 49 69.4
BraA05t21403Z Brassica rapa HOM05D031163 ORTHO05D028098 5.9e-08 60.5 67 53.7
Carub.0008s1371 Capsella rubella HOM05D000147 ORTHO05D003093 7.7e-08 60.1 48 66.7
BcaC08g43977 Brassica carinata HOM05D000147 ORTHO05D003093 1.0e-07 59.7 44 75.0
BolC3t18554H Brassica oleracea HOM05D031163 ORTHO05D028098 1.0e-07 59.7 66 54.5
AL8G28270 Arabidopsis lyrata HOM05D000147 ORTHO05D003093 1.3e-07 59.3 49 69.4
Dinv29238 Davidia involucrata HOM05D000147 ORTHO05D003093 3.8e-07 57.8 49 69.4
AT5G53540 Arabidopsis thaliana HOM05D000147 ORTHO05D003093 5.0e-07 57.4 49 67.3
BcaB08g35718 Brassica carinata HOM05D000147 ORTHO05D003093 5.0e-07 57.4 49 65.3
Thhalv10013746m.g Eutrema salsugineum HOM05D000147 ORTHO05D003093 5.0e-07 57.4 49 65.3
PSO063G5430 Papaver somniferum HOM05D000147 ORTHO05D003093 5.0e-07 57.4 37 75.7
PSO782G1686 Papaver somniferum HOM05D000147 ORTHO05D003093 5.0e-07 57.4 37 75.7
Aqoxy7G00027 Aquilegia oxysepala HOM05D000147 ORTHO05D003093 8.6e-07 56.6 51 58.8
BcaC04g20442 Brassica carinata HOM05D000147 ORTHO05D003093 1.5e-06 55.8 49 63.3
A10p10970 Brassica napus HOM05D003194 ORTHO05D003790 1.5e-06 55.8 49 63.3
C09p43410 Brassica napus HOM05D003194 ORTHO05D003790 1.5e-06 55.8 49 63.3
BolC9t57227H Brassica oleracea HOM05D000147 ORTHO05D003093 1.5e-06 55.8 49 63.3
BraA10t43189Z Brassica rapa HOM05D000147 ORTHO05D003093 1.5e-06 55.8 49 63.3
ECA232G4300 Erigeron canadensis HOM05D000147 ORTHO05D003093 3.3e-06 54.7 48 64.6
CARHR266680 Cardamine hirsuta HOM05D000147 ORTHO05D003093 5.5e-06 53.9 47 66.0
Atru.chr12.2326 Acer truncatum HOM05D000147 ORTHO05D003093 9.5e-06 53.1 46 63.0
PGR042G3363 Punica granatum HOM05D000147 ORTHO05D003093 9.5e-06 53.1 44 63.6


User provided reference genes

Program Settings