Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p03690 Brassica napus HOM05D026691 ORTHO05D023870 5.3e-37 157.1 77 100.0
BraA04t16065Z Brassica rapa HOM05D026691 ORTHO05D023870 5.3e-37 157.1 77 100.0
A04p03740 Brassica napus HOM05D000302 ORTHO05D000334 1.8e-21 105.5 106 57.5
BraA04t16061Z Brassica rapa HOM05D000302 ORTHO05D000334 1.8e-21 105.5 106 57.5
BcaC02g09894 Brassica carinata HOM05D000302 ORTHO05D000334 2.4e-21 105.1 106 57.5
C04p35450 Brassica napus HOM05D000302 ORTHO05D000334 2.4e-21 105.1 106 57.5
C04p35480 Brassica napus HOM05D026691 ORTHO05D023870 2.4e-21 105.1 71 77.5
BolC4t25097H Brassica oleracea HOM05D000302 ORTHO05D000334 2.4e-21 105.1 106 57.5
BolC4t25100H Brassica oleracea HOM05D026691 ORTHO05D023870 2.4e-21 105.1 71 77.5
A04p03700 Brassica napus HOM05D000302 ORTHO05D000334 6.9e-21 103.6 106 55.7
BraA04t16064Z Brassica rapa HOM05D000302 ORTHO05D000334 6.9e-21 103.6 106 55.7
BcaC02g09886 Brassica carinata HOM05D000302 ORTHO05D023870 4.5e-20 100.9 106 54.7
C04p35550 Brassica napus HOM05D000302 ORTHO05D000334 4.5e-20 100.9 106 54.7
BolC4t25110H Brassica oleracea HOM05D000302 ORTHO05D000334 4.5e-20 100.9 106 54.7
BcaC02g09893 Brassica carinata HOM05D000302 ORTHO05D000334 7.6e-20 100.1 106 54.7
C04p35460 Brassica napus HOM05D000302 ORTHO05D000334 7.6e-20 100.1 106 54.7
BolC4t25098H Brassica oleracea HOM05D000302 ORTHO05D000334 7.6e-20 100.1 106 54.7
BcaB02g08335 Brassica carinata HOM05D000302 ORTHO05D000334 1.0e-19 99.8 106 54.7
Sp5g05560 Schrenkiella parvula HOM05D000302 ORTHO05D000334 5.5e-18 94.0 106 50.9
Thhalv10005873m.g Eutrema salsugineum HOM05D000302 ORTHO05D000334 7.2e-18 93.6 106 51.9
AL5G38460 Arabidopsis lyrata HOM05D000302 ORTHO05D000334 1.8e-13 79.0 106 46.2
Thhalv10006039m.g Eutrema salsugineum HOM05D000302 ORTHO05D000334 5.3e-13 77.4 106 42.5
Carub.0005s2376 Capsella rubella HOM05D000302 ORTHO05D000334 1.2e-12 76.3 103 43.7
AT3G57010 Arabidopsis thaliana HOM05D000302 ORTHO05D000334 4.5e-12 74.3 106 43.4
Aa31LG10G11930 Aethionema arabicum HOM05D000302 ORTHO05D000334 2.2e-11 72.0 106 41.5
CARHR167160 Cardamine hirsuta HOM05D000302 ORTHO05D000334 2.2e-11 72.0 106 42.5
Carub.0005s2377 Capsella rubella HOM05D000302 ORTHO05D000334 2.9e-11 71.6 103 42.7
CARHR163700 Cardamine hirsuta HOM05D000302 ORTHO05D000334 6.5e-11 70.5 106 43.4
A03p23190 Brassica napus HOM05D000302 ORTHO05D000334 1.0e-08 63.2 103 38.8
C04p35560 Brassica napus HOM05D000302 ORTHO05D001805 1.0e-08 63.2 72 43.1
BraA03t11539Z Brassica rapa HOM05D000302 ORTHO05D000334 1.0e-08 63.2 103 38.8
AL4G39280 Arabidopsis lyrata HOM05D000302 ORTHO05D000334 1.4e-08 62.8 106 36.8
BolC4t25251H Brassica oleracea HOM05D000302 ORTHO05D000334 1.4e-08 62.8 71 43.7
Thhalv10016720m.g Eutrema salsugineum HOM05D000302 ORTHO05D000334 1.8e-08 62.4 103 37.9
C03p27660 Brassica napus HOM05D000302 ORTHO05D000334 2.3e-08 62.0 103 36.9
BcaC01g05346 Brassica carinata HOM05D000302 ORTHO05D000334 3.0e-08 61.6 103 36.9
BolC3t15136H Brassica oleracea HOM05D000302 ORTHO05D000334 3.0e-08 61.6 103 36.9
Sp4g23600 Schrenkiella parvula HOM05D000302 ORTHO05D000334 3.0e-08 61.6 103 37.9
THA.LOC104803265 Tarenaya hassleriana HOM05D000302 ORTHO05D000334 3.0e-08 61.6 103 38.8
AT2G41300 Arabidopsis thaliana HOM05D000302 ORTHO05D000334 5.1e-08 60.8 106 35.8
C04p02620 Brassica napus HOM05D000302 ORTHO05D000334 6.7e-08 60.5 103 37.9
BolC4t21904H Brassica oleracea HOM05D000302 ORTHO05D000334 6.7e-08 60.5 103 37.9
BcaC02g12772 Brassica carinata HOM05D000302 ORTHO05D000334 8.8e-08 60.1 103 36.9
A05p02200 Brassica napus HOM05D000302 ORTHO05D000334 8.8e-08 60.1 103 36.9
Aa31LG3G730 Aethionema arabicum HOM05D000302 ORTHO05D000334 1.5e-07 59.3 101 36.6
Aa31LG10G11920 Aethionema arabicum HOM05D000302 ORTHO05D000334 2.0e-07 58.9 104 36.5
BcaC02g09885 Brassica carinata HOM05D000302 ORTHO05D001805 4.4e-07 57.8 63 44.4
THA.LOC104824408 Tarenaya hassleriana HOM05D000302 ORTHO05D000334 5.7e-07 57.4 99 35.4
BcaB01g03475 Brassica carinata HOM05D000302 ORTHO05D000334 7.4e-07 57.0 103 35.0
Aa31LG10G11950 Aethionema arabicum HOM05D000302 ORTHO05D000334 1.7e-06 55.8 103 34.0
THA.LOC104806082 Tarenaya hassleriana HOM05D000302 ORTHO05D000334 2.8e-06 55.1 104 38.5
THA.LOC104816658 Tarenaya hassleriana HOM05D000302 ORTHO05D000334 2.8e-06 55.1 104 38.5
Carub.0005s2378 Capsella rubella HOM05D000302 ORTHO05D000334 3.7e-06 54.7 99 33.3


User provided reference genes

Program Settings